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HG10010055 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010055
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionsmall EDRK-rich factor 2
Genome locationChr06:17617148..17623370
RNA-Seq ExpressionHG10010055
SyntenyHG10010055
Gene Ontology termsNA
InterPro domainsIPR007513 - Uncharacterised protein family SERF, N-terminal
IPR040211 - Small EDRK-rich factor 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9592102.1 hypothetical protein Lalb_Chr19g0125681 [Lupinus albus]6.1e-1489.09Show/hide
Query:  REKDRERAQARNPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG
        REKDRERAQARN KGK KDDGLTPEQRRERDAKALQEKTAKKAAQA  G N+SGG
Subjt:  REKDRERAQARNPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG

KAF1884038.1 hypothetical protein Lal_00012998 [Lupinus albus]6.1e-1489.09Show/hide
Query:  REKDRERAQARNPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG
        REKDRERAQARN KGK KDDGLTPEQRRERDAKALQEKTAKKAAQA  G N+SGG
Subjt:  REKDRERAQARNPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG

OIW01280.1 hypothetical protein TanjilG_10441 [Lupinus angustifolius]4.7e-1490.91Show/hide
Query:  REKDRERAQARNPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG
        REKDRERAQARN KGK KDDGLTPEQRRERDAKALQEKTAKKAAQAA G N+SGG
Subjt:  REKDRERAQARNPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG

XP_004138960.1 small EDRK-rich factor 2 [Cucumis sativus]1.2e-1494.64Show/hide
Query:  REKDRERAQARN-PKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG
        REKDRERAQARN  KGKNKDDGLTPEQRRERDAKALQEKTAKKAAQA SGGNSSGG
Subjt:  REKDRERAQARN-PKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG

XP_019459300.1 PREDICTED: small EDRK-rich factor 2 [Lupinus angustifolius]4.7e-1490.91Show/hide
Query:  REKDRERAQARNPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG
        REKDRERAQARN KGK KDDGLTPEQRRERDAKALQEKTAKKAAQAA G N+SGG
Subjt:  REKDRERAQARNPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG

TrEMBL top hitse value%identityAlignment
A0A0A0LHU5 4F5 domain-containing protein6.0e-1594.64Show/hide
Query:  REKDRERAQARN-PKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG
        REKDRERAQARN  KGKNKDDGLTPEQRRERDAKALQEKTAKKAAQA SGGNSSGG
Subjt:  REKDRERAQARN-PKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG

A0A4P1R4V8 4F5 domain-containing protein2.3e-1490.91Show/hide
Query:  REKDRERAQARNPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG
        REKDRERAQARN KGK KDDGLTPEQRRERDAKALQEKTAKKAAQAA G N+SGG
Subjt:  REKDRERAQARNPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG

A0A5A7SS85 Small EDRK-rich factor 23.9e-1492.86Show/hide
Query:  REKDRERAQARN-PKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG
        REKDRERAQARN  KGK KDDGLTPEQRRERDAKALQEK AKKAAQAASGGNSSGG
Subjt:  REKDRERAQARN-PKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG

A0A6A4NRM2 4F5 domain-containing protein3.0e-1489.09Show/hide
Query:  REKDRERAQARNPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG
        REKDRERAQARN KGK KDDGLTPEQRRERDAKALQEKTAKKAAQA  G N+SGG
Subjt:  REKDRERAQARNPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG

A0A6A5NHN4 4F5 domain-containing protein3.0e-1489.09Show/hide
Query:  REKDRERAQARNPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG
        REKDRERAQARN KGK KDDGLTPEQRRERDAKALQEKTAKKAAQA  G N+SGG
Subjt:  REKDRERAQARNPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G24100.1 Uncharacterised protein family SERF1.7e-1482.14Show/hide
Query:  REKDRERAQAR-NPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG
        RE+DRERA AR   KGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAA+  +S GG
Subjt:  REKDRERAQAR-NPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG

AT4G13615.1 Uncharacterised protein family SERF3.6e-1280.36Show/hide
Query:  REKDRERAQAR-NPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG
        RE+DRERA AR   KGKN DDGLTPEQRRERD KALQEK AKKAAQAA  G SSGG
Subjt:  REKDRERAQAR-NPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGCACTTTTCTCTTCCAATGGCTGCCTTCCTTCTTGCTCTTGCTTTGGCATGTCTTGCCATTGATGCTCTTGATAGGGAGAAGGATCGAGAGAGGGCTCAGGC
TCGCAACCCTAAGGGTAAAAACAAGGACGATGGTTTGACCCCCGAGCAGCGCCGTGAAAGGGATGCTAAGGCGCTACAAGAGAAGACCGCGAAGAAGGCGGCTCAGGCGG
CATCCGGAGGTAATTCATCTGGAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGCACTTTTCTCTTCCAATGGCTGCCTTCCTTCTTGCTCTTGCTTTGGCATGTCTTGCCATTGATGCTCTTGATAGGGAGAAGGATCGAGAGAGGGCTCAGGC
TCGCAACCCTAAGGGTAAAAACAAGGACGATGGTTTGACCCCCGAGCAGCGCCGTGAAAGGGATGCTAAGGCGCTACAAGAGAAGACCGCGAAGAAGGCGGCTCAGGCGG
CATCCGGAGGTAATTCATCTGGAGGCTGA
Protein sequenceShow/hide protein sequence
MAKHFSLPMAAFLLALALACLAIDALDREKDRERAQARNPKGKNKDDGLTPEQRRERDAKALQEKTAKKAAQAASGGNSSGG