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HG10010069 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010069
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCLAVATA3/ESR-related protein
Genome locationChr06:17819907..17830445
RNA-Seq ExpressionHG10010069
SyntenyHG10010069
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574868.1 CLAVATA3/ESR (CLE)-related protein TDIF, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1054.46Show/hide
Query:  MAKLEDYYL--------KSQAYFFLFFLVLLLLVVPHRFSTVPST------PSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSN
        MAK ED Y         KSQA FFLF LVLLLL VP+RFST PS+      PSR PS S AMA            ++     QFEA+MHEVPSGPNPTSN
Subjt:  MAKLEDYYL--------KSQAYFFLFFLVLLLLVVPHRFSTVPST------PSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSN

Query:  K
        K
Subjt:  K

KAG6593788.1 hypothetical protein SDJN03_13264, partial [Cucurbita argyrosperma subsp. sororia]4.4e-1254.55Show/hide
Query:  MAKLEDYYL-------KSQAYFFLFFLVLLLLVVPHRFSTVP-----STPSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSNK
        MA+L+++Y        KS+A FFLF     LL++P+ FST+P     STPSR PS+S+AM ++    SS YSS+R   LQQFEAAMHEVPSGPNPT+NK
Subjt:  MAKLEDYYL-------KSQAYFFLFFLVLLLLVVPHRFSTVP-----STPSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSNK

KGN61461.1 hypothetical protein Csa_006135 [Cucumis sativus]2.5e-1564.37Show/hide
Query:  MAKLEDYYLKSQAYFFLFFLVLLLLVVPHRFSTVPSTPSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSNK
        MAK  + YLKSQA FFLF LVLLLLVVPHR STVP+TPSR PSN MAM                     FEAAMHEVPSGPNPTSNK
Subjt:  MAKLEDYYLKSQAYFFLFFLVLLLLVVPHRFSTVPSTPSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSNK

TrEMBL top hitse value%identityAlignment
A0A0A0LNB8 CLAVATA3/ESR-related protein1.2e-1564.37Show/hide
Query:  MAKLEDYYLKSQAYFFLFFLVLLLLVVPHRFSTVPSTPSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSNK
        MAK  + YLKSQA FFLF LVLLLLVVPHR STVP+TPSR PSN MAM                     FEAAMHEVPSGPNPTSNK
Subjt:  MAKLEDYYLKSQAYFFLFFLVLLLLVVPHRFSTVPSTPSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCAATTTTTCACCAAAGGAGTGGTAGAGTGACCGCCATCGGAGGTCGCTGGTTAGATGTTGCCAGAGTTGGCCACATGTGGTGGTTGCCGGAGTTGGCTGTCGG
AGGTGGTCGCTGGAGTTGGCCACAACAATGGTGGTTGAATGTTGTCGGAGTTGGCTGCATGCGGTGGTTGTCAGAGTTGGTCGTCGGAGGTGATCGCCGAAATTGGTCGT
TGGAGCTTCCGGGGGGTGTCACCGTTGCCGATCGTCATCGTCATTCGTCCCTGTCGTCTTTCCACTCCCTTTTCATGGCAAAACTTGAAGATTATTATTTGAAGTCTCAA
GCTTATTTCTTCCTCTTCTTCCTCGTTCTTCTCCTCCTCGTTGTTCCTCATCGCTTCTCGACCGTTCCGAGTACTCCGTCTCGTGCTCCTTCAAATTCTATGGCCATGGC
AAAACGACCCTTATTCATCTCTAGCCATTATTCTAGTAAAAGAATATTATTATTGCAACAGTTTGAAGCAGCTATGCATGAAGTTCCTAGTGGCCCAAATCCCACATCCA
ACAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCAATTTTTCACCAAAGGAGTGGTAGAGTGACCGCCATCGGAGGTCGCTGGTTAGATGTTGCCAGAGTTGGCCACATGTGGTGGTTGCCGGAGTTGGCTGTCGG
AGGTGGTCGCTGGAGTTGGCCACAACAATGGTGGTTGAATGTTGTCGGAGTTGGCTGCATGCGGTGGTTGTCAGAGTTGGTCGTCGGAGGTGATCGCCGAAATTGGTCGT
TGGAGCTTCCGGGGGGTGTCACCGTTGCCGATCGTCATCGTCATTCGTCCCTGTCGTCTTTCCACTCCCTTTTCATGGCAAAACTTGAAGATTATTATTTGAAGTCTCAA
GCTTATTTCTTCCTCTTCTTCCTCGTTCTTCTCCTCCTCGTTGTTCCTCATCGCTTCTCGACCGTTCCGAGTACTCCGTCTCGTGCTCCTTCAAATTCTATGGCCATGGC
AAAACGACCCTTATTCATCTCTAGCCATTATTCTAGTAAAAGAATATTATTATTGCAACAGTTTGAAGCAGCTATGCATGAAGTTCCTAGTGGCCCAAATCCCACATCCA
ACAAGTAA
Protein sequenceShow/hide protein sequence
MVAIFHQRSGRVTAIGGRWLDVARVGHMWWLPELAVGGGRWSWPQQWWLNVVGVGCMRWLSELVVGGDRRNWSLELPGGVTVADRHRHSSLSSFHSLFMAKLEDYYLKSQ
AYFFLFFLVLLLLVVPHRFSTVPSTPSRAPSNSMAMAKRPLFISSHYSSKRILLLQQFEAAMHEVPSGPNPTSNK