; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10010080 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010080
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionS-protein homolog
Genome locationChr06:18027589..18028014
RNA-Seq ExpressionHG10010080
SyntenyHG10010080
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059530.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]2.9e-4078.85Show/hide
Query:  FTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGE
        FT EGKPFQ+P VTVNITNAL    +QLTVHCKS DDDLGVHQL  L  YAFTFRPNF GTTLFYCTFQW GW++ FDIYKDSRDR+RCN+ LCLWIVGE
Subjt:  FTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGE

Query:  QGIC
        QG+C
Subjt:  QGIC

KGN61530.1 hypothetical protein Csa_006387 [Cucumis sativus]9.1e-5876.26Show/hide
Query:  MGSFSTFALCLLISMFLAS-FTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIY
        M SFSTF L L IS+  A+ FTIEGKPFQSPPVTVNITNALK  NNQLT+HCKSGDDDLGVHQLSHL SYAF FRPNF+G+TLFYC F W G +HYF+IY
Subjt:  MGSFSTFALCLLISMFLAS-FTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIY

Query:  KDSRDRNRCNETLCLWIVGEQGICMFNYGTKKYDYCYTW
        +D RDR +CN+TLCLWIVGEQG+CMF+Y T  YD CYTW
Subjt:  KDSRDRNRCNETLCLWIVGEQGICMFNYGTKKYDYCYTW

XP_008460739.1 PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo]5.0e-4878.38Show/hide
Query:  VTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGEQGICMFNYGTKK
        +TVNITN + G NNQLTVHCKSGDDDLGVH+L HLVSY FTFRPNF+G+TLFYC FQW  W HYFDIYKDSRD  RCN+TLCLWI+ E+GICMFNY TK 
Subjt:  VTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGEQGICMFNYGTKK

Query:  YDYCYTW-LAK
        YDYCY W LAK
Subjt:  YDYCYTW-LAK

XP_008465559.1 PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]1.5e-5280.33Show/hide
Query:  FTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGE
        FTIEGKPFQ+P VTVNITNAL    +QLTVHCKSGDDDLG+HQL  L  YAFTFRPNF GTTLFYCTFQWPGW+H FDIYKDSRDR+RCN  LCLWIVGE
Subjt:  FTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGE

Query:  QGICMFNYGTKKYDYCYTWLAK
        QG+CMF+Y TKKYD+CYTW+ K
Subjt:  QGICMFNYGTKKYDYCYTWLAK

XP_022975116.1 S-protein homolog 3-like, partial [Cucurbita maxima]2.5e-3974.51Show/hide
Query:  TIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGEQ
        TI+G  F+ PP+TVNITN L+  +NQLTVHCKSGDDDLG+HQL +L  YAFTFRPNF+GTT FYCTFQWPG++ YFDIYKD RDR +CN+TLCLWIVG+Q
Subjt:  TIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGEQ

Query:  GI
        GI
Subjt:  GI

TrEMBL top hitse value%identityAlignment
A0A0A0LI28 S-protein homolog4.4e-5876.26Show/hide
Query:  MGSFSTFALCLLISMFLAS-FTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIY
        M SFSTF L L IS+  A+ FTIEGKPFQSPPVTVNITNALK  NNQLT+HCKSGDDDLGVHQLSHL SYAF FRPNF+G+TLFYC F W G +HYF+IY
Subjt:  MGSFSTFALCLLISMFLAS-FTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIY

Query:  KDSRDRNRCNETLCLWIVGEQGICMFNYGTKKYDYCYTW
        +D RDR +CN+TLCLWIVGEQG+CMF+Y T  YD CYTW
Subjt:  KDSRDRNRCNETLCLWIVGEQGICMFNYGTKKYDYCYTW

A0A1S3CDK4 S-protein homolog2.4e-4878.38Show/hide
Query:  VTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGEQGICMFNYGTKK
        +TVNITN + G NNQLTVHCKSGDDDLGVH+L HLVSY FTFRPNF+G+TLFYC FQW  W HYFDIYKDSRD  RCN+TLCLWI+ E+GICMFNY TK 
Subjt:  VTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGEQGICMFNYGTKK

Query:  YDYCYTW-LAK
        YDYCY W LAK
Subjt:  YDYCYTW-LAK

A0A1S3CP53 S-protein homolog7.3e-5380.33Show/hide
Query:  FTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGE
        FTIEGKPFQ+P VTVNITNAL    +QLTVHCKSGDDDLG+HQL  L  YAFTFRPNF GTTLFYCTFQWPGW+H FDIYKDSRDR+RCN  LCLWIVGE
Subjt:  FTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGE

Query:  QGICMFNYGTKKYDYCYTWLAK
        QG+CMF+Y TKKYD+CYTW+ K
Subjt:  QGICMFNYGTKKYDYCYTWLAK

A0A5A7UWN1 S-protein homolog1.4e-4078.85Show/hide
Query:  FTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGE
        FT EGKPFQ+P VTVNITNAL    +QLTVHCKS DDDLGVHQL  L  YAFTFRPNF GTTLFYCTFQW GW++ FDIYKDSRDR+RCN+ LCLWIVGE
Subjt:  FTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGE

Query:  QGIC
        QG+C
Subjt:  QGIC

A0A6J1IDA7 S-protein homolog1.2e-3974.51Show/hide
Query:  TIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGEQ
        TI+G  F+ PP+TVNITN L+  +NQLTVHCKSGDDDLG+HQL +L  YAFTFRPNF+GTT FYCTFQWPG++ YFDIYKD RDR +CN+TLCLWIVG+Q
Subjt:  TIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGEQ

Query:  GI
        GI
Subjt:  GI

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 22.6e-2347.01Show/hide
Query:  FQSPPVTVNITNALKGQNNQLTV--HCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDR---NRCNETLCLWIVGEQG
        F +   TV I N L    NQLT+  HCKS DDDLG   L    S++F+F   FFG TL++C+F WP  +H FDIYKD RD    N+C    C+W +   G
Subjt:  FQSPPVTVNITNALKGQNNQLTV--HCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDR---NRCNETLCLWIVGEQG

Query:  ICMFNYGTKKYDYCYTW
         C FN  TK++D CY W
Subjt:  ICMFNYGTKKYDYCYTW

F4JZG1 S-protein homolog 44.3e-1843.52Show/hide
Query:  VNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFF-GTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNE--TLCLWIVGEQGICMFNYGTK
        V ITN L G  + L +HCKS DDDLG+  L+   S++F FRP+   G TLF+C F WPG + +F+IY D RD  R       C+W +G+ G C F+    
Subjt:  VNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFF-GTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNE--TLCLWIVGEQGICMFNYGTK

Query:  KYDYCYTW
         ++ CY W
Subjt:  KYDYCYTW

O23020 S-protein homolog 52.6e-1539.05Show/hide
Query:  VNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGEQGICMFNYGTKKYD
        V +TN + G    LT+HCKS  DDLG+H +     Y F F+PN + +TLF+C+FQW      FDIY   RD+  C++  C W +   G C      K   
Subjt:  VNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNETLCLWIVGEQGICMFNYGTKKYD

Query:  YCYTW
         C+ W
Subjt:  YCYTW

P0DN93 S-protein homolog 291.3e-1736.76Show/hide
Query:  SFSTFALCLLISMFLASFTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDS
        S   F +  +I  ++ S      PF    VTV  TN +  Q   LT+ C+S DDDLG H L H  ++ + FRP++F TTLF C F W     +FD Y+  
Subjt:  SFSTFALCLLISMFLASFTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDS

Query:  RDRNRCNETLCLWIVGEQGICMFNYGTKKYDYCYTW
        RD+  C    C W +     C+     KK+D CY W
Subjt:  RDRNRCNETLCLWIVGEQGICMFNYGTKKYDYCYTW

Q9FMQ4 S-protein homolog 31.6e-2046.73Show/hide
Query:  VNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRD--RNRCNETLCLWIVGEQGICMFNYGTKK
        V ITN L G    L +HCKS DDDLG+  L+   S++F FR +  GTTLFYC F WPG +  FDIY D RD  R+  +   C+W +  QG CMF+     
Subjt:  VNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRD--RNRCNETLCLWIVGEQGICMFNYGTKK

Query:  YDYCYTW
        ++ CY W
Subjt:  YDYCYTW

Arabidopsis top hitse value%identityAlignment
AT3G16970.1 Plant self-incompatibility protein S1 family2.0e-1841.38Show/hide
Query:  FQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRN----RCNETLCLWIVGEQGI
        F +P  TV I N L G +  L  HCKS +DDLG   ++   +++F FRP+ FG TLF+C F W    H+FDIYK SRDR      C    C W + + G 
Subjt:  FQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRN----RCNETLCLWIVGEQGI

Query:  CMFNYGTKKYDYCYTW
        C  N  +  +D C  W
Subjt:  CMFNYGTKKYDYCYTW

AT3G17080.1 Plant self-incompatibility protein S1 family1.8e-1938.73Show/hide
Query:  MGSFSTFALCLLISMFLASFTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYK
        MGS  T  L  ++ MF+++             +V I N L G    L  HCKS +DDLG   L+   S++F F P+ FG TLFYC F W   +H FDIYK
Subjt:  MGSFSTFALCLLISMFLASFTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYK

Query:  DSRDRN----RCNETLCLWIVGEQGICMFNYGTKKYDYCYTW
         SRD+      C +  C W + + G C F   T  +D+CY+W
Subjt:  DSRDRN----RCNETLCLWIVGEQGICMFNYGTKKYDYCYTW

AT4G16195.1 Plant self-incompatibility protein S1 family1.8e-2447.01Show/hide
Query:  FQSPPVTVNITNALKGQNNQLTV--HCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDR---NRCNETLCLWIVGEQG
        F +   TV I N L    NQLT+  HCKS DDDLG   L    S++F+F   FFG TL++C+F WP  +H FDIYKD RD    N+C    C+W +   G
Subjt:  FQSPPVTVNITNALKGQNNQLTV--HCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDR---NRCNETLCLWIVGEQG

Query:  ICMFNYGTKKYDYCYTW
         C FN  TK++D CY W
Subjt:  ICMFNYGTKKYDYCYTW

AT5G12060.1 Plant self-incompatibility protein S1 family1.1e-2146.73Show/hide
Query:  VNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRD--RNRCNETLCLWIVGEQGICMFNYGTKK
        V ITN L G    L +HCKS DDDLG+  L+   S++F FR +  GTTLFYC F WPG +  FDIY D RD  R+  +   C+W +  QG CMF+     
Subjt:  VNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRD--RNRCNETLCLWIVGEQGICMFNYGTKK

Query:  YDYCYTW
        ++ CY W
Subjt:  YDYCYTW

AT5G12070.1 Plant self-incompatibility protein S1 family3.1e-1943.52Show/hide
Query:  VNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFF-GTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNE--TLCLWIVGEQGICMFNYGTK
        V ITN L G  + L +HCKS DDDLG+  L+   S++F FRP+   G TLF+C F WPG + +F+IY D RD  R       C+W +G+ G C F+    
Subjt:  VNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFF-GTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNE--TLCLWIVGEQGICMFNYGTK

Query:  KYDYCYTW
         ++ CY W
Subjt:  KYDYCYTW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCATTTTCAACATTTGCACTATGTCTTTTGATATCAATGTTTTTGGCTAGCTTCACCATCGAAGGAAAACCCTTCCAATCCCCACCAGTTACAGTCAACATAAC
AAATGCTCTAAAAGGTCAGAATAATCAACTCACCGTTCACTGCAAATCTGGCGATGATGACTTGGGAGTCCACCAGTTGTCACATTTGGTCAGCTATGCCTTCACTTTTC
GGCCAAACTTTTTTGGTACAACATTGTTTTACTGTACCTTTCAATGGCCTGGTTGGACACATTACTTCGATATTTACAAGGATTCAAGAGATAGAAATCGTTGCAATGAA
ACTCTTTGTTTGTGGATTGTGGGTGAACAAGGTATCTGTATGTTCAACTATGGTACTAAAAAGTACGATTATTGCTATACGTGGTTGGCTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCATTTTCAACATTTGCACTATGTCTTTTGATATCAATGTTTTTGGCTAGCTTCACCATCGAAGGAAAACCCTTCCAATCCCCACCAGTTACAGTCAACATAAC
AAATGCTCTAAAAGGTCAGAATAATCAACTCACCGTTCACTGCAAATCTGGCGATGATGACTTGGGAGTCCACCAGTTGTCACATTTGGTCAGCTATGCCTTCACTTTTC
GGCCAAACTTTTTTGGTACAACATTGTTTTACTGTACCTTTCAATGGCCTGGTTGGACACATTACTTCGATATTTACAAGGATTCAAGAGATAGAAATCGTTGCAATGAA
ACTCTTTGTTTGTGGATTGTGGGTGAACAAGGTATCTGTATGTTCAACTATGGTACTAAAAAGTACGATTATTGCTATACGTGGTTGGCTAAATGA
Protein sequenceShow/hide protein sequence
MGSFSTFALCLLISMFLASFTIEGKPFQSPPVTVNITNALKGQNNQLTVHCKSGDDDLGVHQLSHLVSYAFTFRPNFFGTTLFYCTFQWPGWTHYFDIYKDSRDRNRCNE
TLCLWIVGEQGICMFNYGTKKYDYCYTWLAK