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HG10010081 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010081
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionglycine-rich protein 5-like
Genome locationChr06:18040611..18041916
RNA-Seq ExpressionHG10010081
SyntenyHG10010081
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008460740.1 PREDICTED: glycine-rich cell wall structural protein 1-like [Cucumis melo]1.1e-3576.67Show/hide
Query:  MAKIFIVVVAFVFLVVNAGGRNVPGGGSRE-EYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHG
        MAK  +V+VAFVF ++N  GR VP G SR+ EYQTLE+AA+PVA PP  GGV DQKNIFGGVGGF GMGGYIGGL+PHLGGVG IGKYGGIGGG GFGHG
Subjt:  MAKIFIVVVAFVFLVVNAGGRNVPGGGSRE-EYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHG

Query:  GFG---GGVGGVGGGFVPFP
        GFG   GGVGGVGGG VPFP
Subjt:  GFG---GGVGGVGGGFVPFP

XP_031736585.1 elastin-like isoform X1 [Cucumis sativus]1.1e-3578.57Show/hide
Query:  MAKIFIVVVAFVFLVVNAGGRNVPGGGSR--EEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGH
        MAK F++++ FVFL++N  GRNVPG G R  E+Y+TLE+AAAPVA PPS GGV DQKNIFGGVG FAGMGGYIGGL+PHLGGVGVIGKYGGIGGG G GH
Subjt:  MAKIFIVVVAFVFLVVNAGGRNVPGGGSR--EEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGH

Query:  GGFGGGVGGVGG
        GGFGGGVGGVGG
Subjt:  GGFGGGVGGVGG

XP_031736586.1 ctenidin-3-like isoform X2 [Cucumis sativus]8.1e-3679.28Show/hide
Query:  MAKIFIVVVAFVFLVVNAGGRNVPGGGSREE-YQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHG
        MAK F++++ FVFL++N  GRNVP GG R+E Y+TLE+AAAPVA PPS GGV DQKNIFGGVG FAGMGGYIGGL+PHLGGVGVIGKYGGIGGG G GHG
Subjt:  MAKIFIVVVAFVFLVVNAGGRNVPGGGSREE-YQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHG

Query:  GFGGGVGGVGG
        GFGGGVGGVGG
Subjt:  GFGGGVGGVGG

XP_031736587.1 glycine-rich protein 5-like isoform X3 [Cucumis sativus]2.5e-3776.86Show/hide
Query:  MAKIFIVVVAFVFLVVNAGGRNVPGGGSR--EEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGH
        MAK F++++ FVFL++N  GRNVPG G R  E+Y+TLE+AAAPVA PPS GGV DQKNIFGGVG FAGMGGYIGGL+PHLGGVGVIGKYGGIGGG G GH
Subjt:  MAKIFIVVVAFVFLVVNAGGRNVPGGGSR--EEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGH

Query:  GGFGGGVGGV---GGGFVPFP
        GGFGGGVGGV   GGG VPFP
Subjt:  GGFGGGVGGV---GGGFVPFP

XP_038906734.1 glycine-rich protein 5-like [Benincasa hispida]2.5e-4590.76Show/hide
Query:  MAKIFIVVVAFVFLVVNAGGRNVPGGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHGG
        MAKIFIVVVAFVFL VNAGGRNVP GGS+E+YQTLEQAAAPVA PPSS GV DQKNIFGGVGGFAGMGGYIGGL+PHLGGVGVIGKYGGIGGGIGFGHGG
Subjt:  MAKIFIVVVAFVFLVVNAGGRNVPGGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHGG

Query:  FG---GGVGGVGGGFVPFP
        FG   GGVGGVGGGFVPFP
Subjt:  FG---GGVGGVGGGFVPFP

TrEMBL top hitse value%identityAlignment
A0A1S3CEA9 glycine-rich cell wall structural protein 1-like5.1e-3676.67Show/hide
Query:  MAKIFIVVVAFVFLVVNAGGRNVPGGGSRE-EYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHG
        MAK  +V+VAFVF ++N  GR VP G SR+ EYQTLE+AA+PVA PP  GGV DQKNIFGGVGGF GMGGYIGGL+PHLGGVG IGKYGGIGGG GFGHG
Subjt:  MAKIFIVVVAFVFLVVNAGGRNVPGGGSRE-EYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHG

Query:  GFG---GGVGGVGGGFVPFP
        GFG   GGVGGVGGG VPFP
Subjt:  GFG---GGVGGVGGGFVPFP

A0A5D3D259 Glycine-rich cell wall structural protein 1-like5.1e-3676.67Show/hide
Query:  MAKIFIVVVAFVFLVVNAGGRNVPGGGSRE-EYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHG
        MAK  +V+VAFVF ++N  GR VP G SR+ EYQTLE+AA+PVA PP  GGV DQKNIFGGVGGF GMGGYIGGL+PHLGGVG IGKYGGIGGG GFGHG
Subjt:  MAKIFIVVVAFVFLVVNAGGRNVPGGGSRE-EYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHG

Query:  GFG---GGVGGVGGGFVPFP
        GFG   GGVGGVGGG VPFP
Subjt:  GFG---GGVGGVGGGFVPFP

A0A6J1CDU6 WW domain-containing protein C660.061.1e-2262.31Show/hide
Query:  IFIVVVAFVFLVVNAGGRNVPG-GGSREEYQTLEQAAAPVAYPPSSGGVVDQKN-IFGGVGGFAGMGGYIGGLYPHL--GGVGVIGKYGGIG--------
        +F+V+ AFV LVV+A GR+VPG   S ++ QTLE A  PVA PPSSGGV +QK  IFGGVGGFAGMGG++GGL+PHL  GGVG IGK+GGIG        
Subjt:  IFIVVVAFVFLVVNAGGRNVPG-GGSREEYQTLEQAAAPVAYPPSSGGVVDQKN-IFGGVGGFAGMGGYIGGLYPHL--GGVGVIGKYGGIG--------

Query:  -----GGIGFGHGGFGGGVGGVGGGFVPFP
             GG+G G GG GGGVGGVGGG +PFP
Subjt:  -----GGIGFGHGGFGGGVGGVGGGFVPFP

A0A6J1HL05 glycine-rich protein 5-like1.5e-3276.86Show/hide
Query:  MAKI--FIVVVAFVFLVVNAGGRNVPGGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGH
        MAKI   +VVV FV LVV+A GRNVPGGGS +    L+ A APVA  PSS   VDQKNI+GGVGGFAGMGGYIGGL+PHLGGVGVIGKYGGIGGGIGFGH
Subjt:  MAKI--FIVVVAFVFLVVNAGGRNVPGGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGH

Query:  GGFG---GGVGGVGGGFVPFP
        GGFG   GGVGGVGGG VPFP
Subjt:  GGFG---GGVGGVGGGFVPFP

A0A6J1KIQ3 glycine-rich protein 5-like2.6e-3276.72Show/hide
Query:  IFIVVVAFVFLVVNAGGRNVPGGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHGGFG-
        + +VVV FV LVV+A GRNVPGGGS +    L+ A APVA  PSS   VDQKNI+GGVGGFAGMGGYIGGL+PHLGGVGVIGKYGGIGGGIGFGHGGFG 
Subjt:  IFIVVVAFVFLVVNAGGRNVPGGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHGGFG-

Query:  --GGVGGVGGGFVPFP
          GGVGGVGGG VPFP
Subjt:  --GGVGGVGGGFVPFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04660.1 glycine-rich protein3.5e-0544.09Show/hide
Query:  IVVVAFVFLVVNAGGRNVPGGG------SREEYQTLE-QAAAPVAYPPSSGGVVDQKNIFG--GVGGFAGMGGY--IGGL-YPHLGGVGVIGKYGGIGGG
        +V V      V A  R VPG          ++  T+   A A    PP S G  D+K I G  GVGGFAG+GG   +GGL  P +GG+G IGKYGGIGG 
Subjt:  IVVVAFVFLVVNAGGRNVPGGG------SREEYQTLE-QAAAPVAYPPSSGGVVDQKNIFG--GVGGFAGMGGY--IGGL-YPHLGGVGVIGKYGGIGGG

Query:  IGFGH----------GGFGGGVGGVGG
         G G           GG GGGVGG+GG
Subjt:  IGFGH----------GGFGGGVGGVGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAATTTTCATCGTTGTCGTTGCGTTTGTTTTCCTAGTCGTGAATGCGGGTGGGCGCAACGTTCCAGGCGGTGGCAGTAGGGAAGAGTACCAAACCCTAGAACA
AGCAGCGGCACCCGTGGCATATCCGCCGAGCAGCGGCGGTGTCGTCGACCAAAAGAACATCTTTGGTGGGGTTGGAGGTTTTGCAGGGATGGGTGGCTACATTGGAGGGT
TGTATCCACATCTTGGTGGGGTTGGCGTAATCGGCAAGTACGGCGGAATTGGTGGTGGCATTGGCTTCGGTCACGGTGGCTTCGGAGGCGGAGTTGGCGGCGTCGGTGGC
GGATTTGTGCCATTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAATTTTCATCGTTGTCGTTGCGTTTGTTTTCCTAGTCGTGAATGCGGGTGGGCGCAACGTTCCAGGCGGTGGCAGTAGGGAAGAGTACCAAACCCTAGAACA
AGCAGCGGCACCCGTGGCATATCCGCCGAGCAGCGGCGGTGTCGTCGACCAAAAGAACATCTTTGGTGGGGTTGGAGGTTTTGCAGGGATGGGTGGCTACATTGGAGGGT
TGTATCCACATCTTGGTGGGGTTGGCGTAATCGGCAAGTACGGCGGAATTGGTGGTGGCATTGGCTTCGGTCACGGTGGCTTCGGAGGCGGAGTTGGCGGCGTCGGTGGC
GGATTTGTGCCATTTCCTTGA
Protein sequenceShow/hide protein sequence
MAKIFIVVVAFVFLVVNAGGRNVPGGGSREEYQTLEQAAAPVAYPPSSGGVVDQKNIFGGVGGFAGMGGYIGGLYPHLGGVGVIGKYGGIGGGIGFGHGGFGGGVGGVGG
GFVPFP