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HG10010083 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010083
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionS-protein homolog
Genome locationChr06:18102869..18103306
RNA-Seq ExpressionHG10010083
SyntenyHG10010083
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016902587.1 PREDICTED: uncharacterized protein LOC103499490 [Cucumis melo]1.1e-7491.72Show/hide
Query:  MKKKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MKKKK L TIL LF  SAFSF +FI+QPDRLYLHGV+FEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
Subjt:  MKKKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        +SFDAFKVPRDFYRCG FKKCSWLVTEDGFYFSPDE+NWKKDFQW
Subjt:  RSFDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW

XP_023000578.1 S-protein homolog 5 [Cucurbita maxima]1.8e-7290.91Show/hide
Query:  KKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRS
        KKKIL+TIL L F+SAFSFFIFIIQPDRLYLHGVV+EVRVINGF NNSSLPLVIWCSSK+SDLGGRALQEHDDFSW+VTTKLW +NQF CTMKWDAKR+S
Subjt:  KKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRS

Query:  FDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        FDAFKVPRDFYRCGIFKKCSWLV EDGFYFSPDEVNWKKDFQW
Subjt:  FDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW

XP_038875011.1 S-protein homolog 5-like [Benincasa hispida]1.2e-7391.72Show/hide
Query:  MKKKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MK KKILSTI+ LFF +AFSFF+FIIQPDRLYL+GVVFEVRVINGFKNNSSLPLVIWCSS+ESDLGGRALQEHDDFSWKVTTKLWK  +FSCTMKWDAKR
Subjt:  MKKKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        RSFDAFKVPRDFYRCG FKKCSWLVTEDGFYFSPDEVNWKKDFQW
Subjt:  RSFDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW

XP_038875976.1 S-protein homolog 5-like isoform X1 [Benincasa hispida]4.9e-7593.79Show/hide
Query:  MKKKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MKKKKILSTIL LFF S+FSFF+FII PDR YLH VVFEVRVINGF+NNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
Subjt:  MKKKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        RSFDAFKVPRDFYRCG FKKCSWLVTEDGFYFSPDEVNWKKDFQW
Subjt:  RSFDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW

XP_038875977.1 S-protein homolog 5-like isoform X2 [Benincasa hispida]7.1e-7493.75Show/hide
Query:  MKKKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MKKKKILSTIL LFF S+FSFF+FII PDR YLH VVFEVRVINGF+NNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
Subjt:  MKKKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQ
        RSFDAFKVPRDFYRCG FKKCSWLVTEDGFYFSPDEVNWKKDFQ
Subjt:  RSFDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQ

TrEMBL top hitse value%identityAlignment
A0A0A0LNI8 S-protein homolog9.1e-6795.93Show/hide
Query:  IFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGIFKKCS
        +FIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKE+DLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCG FKKCS
Subjt:  IFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDFYRCGIFKKCS

Query:  WLVTEDGFYFSPDEVNWKKDFQW
        WLVTEDGFYFS DE+NWKKDFQW
Subjt:  WLVTEDGFYFSPDEVNWKKDFQW

A0A1S4E2Y6 S-protein homolog5.3e-7591.72Show/hide
Query:  MKKKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MKKKK L TIL LF  SAFSF +FI+QPDRLYLHGV+FEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
Subjt:  MKKKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        +SFDAFKVPRDFYRCG FKKCSWLVTEDGFYFSPDE+NWKKDFQW
Subjt:  RSFDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW

A0A5D3CZS1 S-protein homolog5.3e-7591.72Show/hide
Query:  MKKKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
        MKKKK L TIL LF  SAFSF +FI+QPDRLYLHGV+FEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR
Subjt:  MKKKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKR

Query:  RSFDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        +SFDAFKVPRDFYRCG FKKCSWLVTEDGFYFSPDE+NWKKDFQW
Subjt:  RSFDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW

A0A6J1HNC1 S-protein homolog3.2e-7290.21Show/hide
Query:  KKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRS
        KKKIL+ IL L F+SAFSFFIFIIQPDRLYLHGVV+EVRVINGF NNSSLPLVIWCSSK+SDLGGRALQEHDDFSW+VTTKLW +NQF CTMKWDAKR+S
Subjt:  KKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRS

Query:  FDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        FDAFKVPRDFYRCGIFKKCSWLV EDGFYFSPDEVNWKKDFQW
Subjt:  FDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW

A0A6J1KN10 S-protein homolog8.5e-7390.91Show/hide
Query:  KKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRS
        KKKIL+TIL L F+SAFSFFIFIIQPDRLYLHGVV+EVRVINGF NNSSLPLVIWCSSK+SDLGGRALQEHDDFSW+VTTKLW +NQF CTMKWDAKR+S
Subjt:  KKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRS

Query:  FDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW
        FDAFKVPRDFYRCGIFKKCSWLV EDGFYFSPDEVNWKKDFQW
Subjt:  FDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 21.6e-0428.92Show/hide
Query:  SSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF---YRCGIFKKCSWLVTEDG
        + L L+  C SK+ DLG R LQ  + +S+    + +    + C+  W  +  SFD +K  RD     +C    +C W +  +G
Subjt:  SSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF---YRCGIFKKCSWLVTEDG

Arabidopsis top hitse value%identityAlignment
AT1G26798.1 Plant self-incompatibility protein S1 family1.0e-0932.91Show/hide
Query:  LVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRD---FYRCGIFKKCSWLVTEDG
        LV+ C +K  DLG  AL+  +   ++    L ++  ++CT  W    ++FD F+V RD      CGI ++C W + E G
Subjt:  LVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRD---FYRCGIFKKCSWLVTEDG

AT3G24060.1 Plant self-incompatibility protein S1 family1.5e-4256.25Show/hide
Query:  KKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWK-SNQFSCTMKWDAKRR
        +K I+  +  L  +S    F  ++QP  ++L G  F+VRVIN F++NSSLPLVIWC+S + DLGGRALQE DDF W     LW    +++CTMKWD+KR+
Subjt:  KKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWK-SNQFSCTMKWDAKRR

Query:  SFDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW
         F+AFKV RD  RCG  KKCSW V EDGFYFS DEV W KDF W
Subjt:  SFDAFKVPRDFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW

AT4G16195.1 Plant self-incompatibility protein S1 family1.2e-0528.92Show/hide
Query:  SSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF---YRCGIFKKCSWLVTEDG
        + L L+  C SK+ DLG R LQ  + +S+    + +    + C+  W  +  SFD +K  RD     +C    +C W +  +G
Subjt:  SSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPRDF---YRCGIFKKCSWLVTEDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGAAAAAAATTCTAAGCACCATTCTCTTCCTCTTCTTCCTCTCAGCATTCTCCTTCTTCATATTCATCATACAGCCAGATAGATTATACCTACACGGCGTTGT
TTTCGAGGTTCGAGTCATCAATGGCTTCAAAAACAACTCATCTTTGCCTTTGGTAATATGGTGCTCTTCAAAAGAGAGTGATTTGGGAGGGAGGGCGTTGCAAGAGCATG
ATGATTTCAGCTGGAAAGTGACAACAAAACTTTGGAAGAGCAACCAATTCTCTTGTACCATGAAATGGGATGCCAAAAGGAGGTCCTTTGATGCGTTTAAGGTTCCTAGG
GACTTTTACCGATGTGGGATTTTCAAGAAGTGTTCTTGGTTGGTTACTGAAGATGGCTTCTATTTTAGCCCTGATGAGGTTAATTGGAAGAAGGATTTTCAGTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGAAAAAAATTCTAAGCACCATTCTCTTCCTCTTCTTCCTCTCAGCATTCTCCTTCTTCATATTCATCATACAGCCAGATAGATTATACCTACACGGCGTTGT
TTTCGAGGTTCGAGTCATCAATGGCTTCAAAAACAACTCATCTTTGCCTTTGGTAATATGGTGCTCTTCAAAAGAGAGTGATTTGGGAGGGAGGGCGTTGCAAGAGCATG
ATGATTTCAGCTGGAAAGTGACAACAAAACTTTGGAAGAGCAACCAATTCTCTTGTACCATGAAATGGGATGCCAAAAGGAGGTCCTTTGATGCGTTTAAGGTTCCTAGG
GACTTTTACCGATGTGGGATTTTCAAGAAGTGTTCTTGGTTGGTTACTGAAGATGGCTTCTATTTTAGCCCTGATGAGGTTAATTGGAAGAAGGATTTTCAGTGGTGA
Protein sequenceShow/hide protein sequence
MKKKKILSTILFLFFLSAFSFFIFIIQPDRLYLHGVVFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCTMKWDAKRRSFDAFKVPR
DFYRCGIFKKCSWLVTEDGFYFSPDEVNWKKDFQW