; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10010084 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010084
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionS-protein homolog
Genome locationChr06:18130976..18131404
RNA-Seq ExpressionHG10010084
SyntenyHG10010084
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61530.1 hypothetical protein Csa_006387 [Cucumis sativus]2.8e-6279.86Show/hide
Query:  MGSFSMFALSLLISLFFATLFTIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIY
        M SFS F LSL ISL FAT+FTIEGKPFQSPPVTVNITN LK  NNQLT+HCKSGDDDLG HQLSHL SYAF FRPNFWG+TLFYC F W G  HYF+IY
Subjt:  MGSFSMFALSLLISLFFATLFTIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIY

Query:  KDLRDRKRCNDTLCLWIVGEEGLCLFNYNTNAYDICYMW
        +DLRDR +CNDTLCLWIVGE+GLC+F+Y TNAYDICY W
Subjt:  KDLRDRKRCNDTLCLWIVGEEGLCLFNYNTNAYDICYMW

XP_008460739.1 PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo]5.2e-4573.83Show/hide
Query:  VTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLCLFNYNTNA
        +TVNITN + G NNQLTVHCKSGDDDLG H+L HL SY FTFRPNFWG+TLFYC FQW  WLHYFDIYKD RD  RCN TLCLWI+ E+G+C+FNY+T  
Subjt:  VTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLCLFNYNTNA

Query:  YDICYMW
        YD CY W
Subjt:  YDICYMW

XP_008465559.1 PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]1.0e-4875.61Show/hide
Query:  LFTIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVG
        LFTIEGKPFQ+P VTVNITN L    +QLTVHCKSGDDDLG HQL  LG YAFTFRPNF GTTLFYCTFQWPGW H FDIYKD RDR RCN  LCLWIVG
Subjt:  LFTIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVG

Query:  EEGLCLFNYNTNAYDICYMWLPK
        E+G+C+F+Y T  YD CY W+ K
Subjt:  EEGLCLFNYNTNAYDICYMWLPK

XP_022975116.1 S-protein homolog 3-like, partial [Cucurbita maxima]5.4e-4274.11Show/hide
Query:  ISLFFATLF-TIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCND
        +SL F TLF TI+G  F+ PP+TVNITNVL+  +NQLTVHCKSGDDDLG HQL +LG YAFTFRPNFWGTT FYCTFQWPG+  YFDIYKD RDR +CN 
Subjt:  ISLFFATLF-TIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCND

Query:  TLCLWIVGEEGL
        TLCLWIVG++G+
Subjt:  TLCLWIVGEEGL

XP_022975612.1 S-protein homolog 3-like, partial [Cucurbita maxima]1.6e-4173.21Show/hide
Query:  ISLFFATLF-TIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCND
        +SLFF TLF TI+   F+ PP+TVNITNVL+  +NQLTVHCKSGDDDLG HQL +LG YAFTFRPNFWG+T FYCTFQWPG+  YFDIYKD RDR +CN 
Subjt:  ISLFFATLF-TIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCND

Query:  TLCLWIVGEEGL
        TLCLWIVG++G+
Subjt:  TLCLWIVGEEGL

TrEMBL top hitse value%identityAlignment
A0A0A0LI28 S-protein homolog1.3e-6279.86Show/hide
Query:  MGSFSMFALSLLISLFFATLFTIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIY
        M SFS F LSL ISL FAT+FTIEGKPFQSPPVTVNITN LK  NNQLT+HCKSGDDDLG HQLSHL SYAF FRPNFWG+TLFYC F W G  HYF+IY
Subjt:  MGSFSMFALSLLISLFFATLFTIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIY

Query:  KDLRDRKRCNDTLCLWIVGEEGLCLFNYNTNAYDICYMW
        +DLRDR +CNDTLCLWIVGE+GLC+F+Y TNAYDICY W
Subjt:  KDLRDRKRCNDTLCLWIVGEEGLCLFNYNTNAYDICYMW

A0A1S3CDK4 S-protein homolog2.5e-4573.83Show/hide
Query:  VTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLCLFNYNTNA
        +TVNITN + G NNQLTVHCKSGDDDLG H+L HL SY FTFRPNFWG+TLFYC FQW  WLHYFDIYKD RD  RCN TLCLWI+ E+G+C+FNY+T  
Subjt:  VTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVGEEGLCLFNYNTNA

Query:  YDICYMW
        YD CY W
Subjt:  YDICYMW

A0A1S3CP53 S-protein homolog4.9e-4975.61Show/hide
Query:  LFTIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVG
        LFTIEGKPFQ+P VTVNITN L    +QLTVHCKSGDDDLG HQL  LG YAFTFRPNF GTTLFYCTFQWPGW H FDIYKD RDR RCN  LCLWIVG
Subjt:  LFTIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCNDTLCLWIVG

Query:  EEGLCLFNYNTNAYDICYMWLPK
        E+G+C+F+Y T  YD CY W+ K
Subjt:  EEGLCLFNYNTNAYDICYMWLPK

A0A6J1IDA7 S-protein homolog2.6e-4274.11Show/hide
Query:  ISLFFATLF-TIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCND
        +SL F TLF TI+G  F+ PP+TVNITNVL+  +NQLTVHCKSGDDDLG HQL +LG YAFTFRPNFWGTT FYCTFQWPG+  YFDIYKD RDR +CN 
Subjt:  ISLFFATLF-TIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCND

Query:  TLCLWIVGEEGL
        TLCLWIVG++G+
Subjt:  TLCLWIVGEEGL

A0A6J1IDI1 S-protein homolog7.6e-4273.21Show/hide
Query:  ISLFFATLF-TIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCND
        +SLFF TLF TI+   F+ PP+TVNITNVL+  +NQLTVHCKSGDDDLG HQL +LG YAFTFRPNFWG+T FYCTFQWPG+  YFDIYKD RDR +CN 
Subjt:  ISLFFATLF-TIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCND

Query:  TLCLWIVGEEGL
        TLCLWIVG++G+
Subjt:  TLCLWIVGEEGL

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 25.5e-2144.44Show/hide
Query:  FQSPPVTVNITNVLKGQNNQLTV--HCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDR---KRCNDTLCLWIVGEEG
        F +   TV I N L    NQLT+  HCKS DDDLG   L    S++F+F   F+G TL++C+F WP   H FDIYKD RD     +C    C+W +   G
Subjt:  FQSPPVTVNITNVLKGQNNQLTV--HCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDR---KRCNDTLCLWIVGEEG

Query:  LCLFNYNTNAYDICYMW
         C FN  T  +D+CY W
Subjt:  LCLFNYNTNAYDICYMW

F4JZG1 S-protein homolog 45.1e-1940.91Show/hide
Query:  LLISLFFATLFTIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFW-GTTLFYCTFQWPGWLHYFDIYKDLRDRKRC
        LLI + F+ +       + +    V ITN L G  + L +HCKS DDDLG   L+  GS++F FRP+   G TLF+C F WPG   +F+IY D RD  R 
Subjt:  LLISLFFATLFTIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFW-GTTLFYCTFQWPGWLHYFDIYKDLRDRKRC

Query:  N--DTLCLWIVGEEGLCLFNYNTNAYDICYMW
              C+W +G+ G C F+   +A++ICY W
Subjt:  N--DTLCLWIVGEEGLCLFNYNTNAYDICYMW

O23020 S-protein homolog 52.4e-1636.92Show/hide
Query:  LISLFFATLF--TIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRC
        ++  FF  LF     G P       V +TN++ G    LT+HCKS  DDLG H +     Y F F+PN W +TLF+C+FQW      FDIY   RD+  C
Subjt:  LISLFFATLF--TIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRC

Query:  NDTLCLWIVGEEGLCLFNYNTNAYDICYMW
        +D  C W +  +G C           C+ W
Subjt:  NDTLCLWIVGEEGLCLFNYNTNAYDICYMW

P0DN93 S-protein homolog 297.6e-1535.25Show/hide
Query:  MGSFSMFALSLLISLFFATLFTIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIY
        M + S   + L I LF+         PF    VTV  TN +  Q   LT+ C+S DDDLG H L H  ++ + FRP+++ TTLF C F W   + +FD Y
Subjt:  MGSFSMFALSLLISLFFATLFTIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIY

Query:  KDLRDRKRCNDTLCLWIVGEEGLCLFNYNTNAYDICYMW
        +  RD+  C    C W +  +  C+       +D CY W
Subjt:  KDLRDRKRCNDTLCLWIVGEEGLCLFNYNTNAYDICYMW

Q9FMQ4 S-protein homolog 35.5e-2147.66Show/hide
Query:  VNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRD--RKRCNDTLCLWIVGEEGLCLFNYNTNA
        V ITN L G    L +HCKS DDDLG   L+  GS++F FR +  GTTLFYC F WPG    FDIY D RD  R   +   C+W +  +G C+F+ + +A
Subjt:  VNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRD--RKRCNDTLCLWIVGEEGLCLFNYNTNA

Query:  YDICYMW
        ++ICY W
Subjt:  YDICYMW

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family1.7e-1736.92Show/hide
Query:  LISLFFATLF--TIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRC
        ++  FF  LF     G P       V +TN++ G    LT+HCKS  DDLG H +     Y F F+PN W +TLF+C+FQW      FDIY   RD+  C
Subjt:  LISLFFATLF--TIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRC

Query:  NDTLCLWIVGEEGLCLFNYNTNAYDICYMW
        +D  C W +  +G C           C+ W
Subjt:  NDTLCLWIVGEEGLCLFNYNTNAYDICYMW

AT3G16970.1 Plant self-incompatibility protein S1 family7.3e-2142.98Show/hide
Query:  FQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRK--RCNDTLCLWIVGEEGLCL
        F +P  TV I N L G +  L  HCKS +DDLG   ++  G+++F FRP+ +G TLF+C F W   LH+FDIYK  RDR+        C W + ++G C 
Subjt:  FQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRK--RCNDTLCLWIVGEEGLCL

Query:  FNYNTNAYDICYMW
         N N+N +D+C  W
Subjt:  FNYNTNAYDICYMW

AT4G16195.1 Plant self-incompatibility protein S1 family3.9e-2244.44Show/hide
Query:  FQSPPVTVNITNVLKGQNNQLTV--HCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDR---KRCNDTLCLWIVGEEG
        F +   TV I N L    NQLT+  HCKS DDDLG   L    S++F+F   F+G TL++C+F WP   H FDIYKD RD     +C    C+W +   G
Subjt:  FQSPPVTVNITNVLKGQNNQLTV--HCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDR---KRCNDTLCLWIVGEEG

Query:  LCLFNYNTNAYDICYMW
         C FN  T  +D+CY W
Subjt:  LCLFNYNTNAYDICYMW

AT5G12060.1 Plant self-incompatibility protein S1 family3.9e-2247.66Show/hide
Query:  VNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRD--RKRCNDTLCLWIVGEEGLCLFNYNTNA
        V ITN L G    L +HCKS DDDLG   L+  GS++F FR +  GTTLFYC F WPG    FDIY D RD  R   +   C+W +  +G C+F+ + +A
Subjt:  VNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRD--RKRCNDTLCLWIVGEEGLCLFNYNTNA

Query:  YDICYMW
        ++ICY W
Subjt:  YDICYMW

AT5G12070.1 Plant self-incompatibility protein S1 family3.6e-2040.91Show/hide
Query:  LLISLFFATLFTIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFW-GTTLFYCTFQWPGWLHYFDIYKDLRDRKRC
        LLI + F+ +       + +    V ITN L G  + L +HCKS DDDLG   L+  GS++F FRP+   G TLF+C F WPG   +F+IY D RD  R 
Subjt:  LLISLFFATLFTIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFW-GTTLFYCTFQWPGWLHYFDIYKDLRDRKRC

Query:  N--DTLCLWIVGEEGLCLFNYNTNAYDICYMW
              C+W +G+ G C F+   +A++ICY W
Subjt:  N--DTLCLWIVGEEGLCLFNYNTNAYDICYMW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCGTTTTCAATGTTTGCACTATCTCTGTTGATATCGTTGTTTTTTGCTACCCTTTTCACTATCGAAGGAAAACCCTTCCAATCCCCACCAGTTACAGTCAACAT
AACAAATGTTCTAAAAGGTCAGAATAATCAACTCACTGTTCACTGCAAATCTGGCGATGATGACTTGGGATTCCACCAGCTCTCACATTTGGGCAGCTACGCTTTCACTT
TTCGACCAAACTTTTGGGGTACAACCTTGTTTTATTGTACATTCCAATGGCCTGGCTGGTTACATTACTTTGATATCTATAAGGATTTAAGAGATAGAAAACGTTGTAAT
GATACTCTGTGTTTGTGGATTGTGGGTGAAGAAGGTCTTTGTCTGTTCAACTATAACACCAATGCGTATGACATTTGTTATATGTGGTTGCCTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCGTTTTCAATGTTTGCACTATCTCTGTTGATATCGTTGTTTTTTGCTACCCTTTTCACTATCGAAGGAAAACCCTTCCAATCCCCACCAGTTACAGTCAACAT
AACAAATGTTCTAAAAGGTCAGAATAATCAACTCACTGTTCACTGCAAATCTGGCGATGATGACTTGGGATTCCACCAGCTCTCACATTTGGGCAGCTACGCTTTCACTT
TTCGACCAAACTTTTGGGGTACAACCTTGTTTTATTGTACATTCCAATGGCCTGGCTGGTTACATTACTTTGATATCTATAAGGATTTAAGAGATAGAAAACGTTGTAAT
GATACTCTGTGTTTGTGGATTGTGGGTGAAGAAGGTCTTTGTCTGTTCAACTATAACACCAATGCGTATGACATTTGTTATATGTGGTTGCCTAAATAA
Protein sequenceShow/hide protein sequence
MGSFSMFALSLLISLFFATLFTIEGKPFQSPPVTVNITNVLKGQNNQLTVHCKSGDDDLGFHQLSHLGSYAFTFRPNFWGTTLFYCTFQWPGWLHYFDIYKDLRDRKRCN
DTLCLWIVGEEGLCLFNYNTNAYDICYMWLPK