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HG10010085 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010085
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionS-protein homolog
Genome locationChr06:18176902..18177177
RNA-Seq ExpressionHG10010085
SyntenyHG10010085
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4261933.1 unnamed protein product [Prunus armeniaca]5.6e-0843.24Show/hide
Query:  FVPISGGTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPY-CFWNITEKGACL-----KHRDFCLLWNKDDVAKH
        F P   GTT F+CSF+W + FHYFDIY+  RD + C  Y C W+I  KG C+      H D C  WN   +  +
Subjt:  FVPISGGTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPY-CFWNITEKGACL-----KHRDFCLLWNKDDVAKH
KAB1227571.1 hypothetical protein CJ030_MR1G019969 [Morella rubra]1.9e-0854.1Show/hide
Query:  TTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGACL------KHRDFCLLWNK
        TTLFFCSF+W +AFH+FDIY F RD  +C   C W I E G CL      K  D C  WNK
Subjt:  TTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGACL------KHRDFCLLWNK
KAF7846978.1 hypothetical protein BT93_L3519 [Corymbia citriodora subsp. variegata]6.6e-0956.36Show/hide
Query:  GTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGACLKHRDFCLLWN
        GTTLFFCSFKWS  FHY+DIYV KRD   C+  C W +   G CL+ +  C  WN
Subjt:  GTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGACLKHRDFCLLWN
ONI26947.1 hypothetical protein PRUPE_1G057200 [Prunus persica]5.6e-0843.24Show/hide
Query:  FVPISGGTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPY-CFWNITEKGACL-----KHRDFCLLWNKDDVAKH
        F P   GTT F+CSF+W + FHYFDIY+  RD + C  Y C W+I  KG C+      H D C  WN   +  +
Subjt:  FVPISGGTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPY-CFWNITEKGACL-----KHRDFCLLWNKDDVAKH
XP_027351370.1 S-protein homolog 2-like [Abrus precatorius]5.6e-0865.91Show/hide
Query:  GTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGAC
        G TLFFCSF+WS A H FDIY +KRD KVC   CFWNI + G C
Subjt:  GTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGAC
TrEMBL top hitse value%identityAlignment
A0A3Q7XJF6 S-protein homolog7.9e-0851.72Show/hide
Query:  GTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGACLK--HRDFCLLWNK
        G TLFFC FKW+   H+FDIY  +RD   CK  C+W+I + G CLK    D C  WNK
Subjt:  GTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGACLK--HRDFCLLWNK
A0A6A1WQK2 S-protein homolog9.3e-0954.1Show/hide
Query:  TTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGACL------KHRDFCLLWNK
        TTLFFCSF+W +AFH+FDIY F RD  +C   C W I E G CL      K  D C  WNK
Subjt:  TTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGACL------KHRDFCLLWNK
A0A6A1WQM3 S-protein homolog3.5e-0850.82Show/hide
Query:  TTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGACL------KHRDFCLLWNK
        TTLFFCSF+W +AFH+FDIY F RD  +C   C W + E G CL      K  D C  W+K
Subjt:  TTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGACL------KHRDFCLLWNK
A0A6J5TDE4 S-protein homolog2.7e-0843.24Show/hide
Query:  FVPISGGTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPY-CFWNITEKGACL-----KHRDFCLLWNKDDVAKH
        F P   GTT F+CSF+W + FHYFDIY+  RD + C  Y C W+I  KG C+      H D C  WN   +  +
Subjt:  FVPISGGTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPY-CFWNITEKGACL-----KHRDFCLLWNKDDVAKH
M5XFD5 S-protein homolog2.7e-0843.24Show/hide
Query:  FVPISGGTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPY-CFWNITEKGACL-----KHRDFCLLWNKDDVAKH
        F P   GTT F+CSF+W + FHYFDIY+  RD + C  Y C W+I  KG C+      H D C  WN   +  +
Subjt:  FVPISGGTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPY-CFWNITEKGACL-----KHRDFCLLWNKDDVAKH
SwissProt top hitse value%identityAlignment
B3H7A6 S-protein homolog 193.2e-0644.44Show/hide
Query:  TLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGAC-LKHRDFCLLWN
        TLFFC F+W +   +FDI+V  RD+  C  +C W+I   G C L  R+ C  WN
Subjt:  TLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGAC-LKHRDFCLLWN
O23020 S-protein homolog 52.1e-0544.26Show/hide
Query:  FVPISGGTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGAC-LKHRDFCLLW
        F P    +TLFFCSF+W S F  FDIY  +RD  +C   C W I   G C L  +  C  W
Subjt:  FVPISGGTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGAC-LKHRDFCLLW
Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family1.5e-0644.26Show/hide
Query:  FVPISGGTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGAC-LKHRDFCLLW
        F P    +TLFFCSF+W S F  FDIY  +RD  +C   C W I   G C L  +  C  W
Subjt:  FVPISGGTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGAC-LKHRDFCLLW
AT3G16970.1 Plant self-incompatibility protein S1 family6.6e-0736.49Show/hide
Query:  DFVPISGGTTLFFCSFKWSSAFHYFDIYVFKRDIKVCK---PYCFWNITEKGACLKHR-----DFCLLWNKDDV
        +F P   G TLFFC F W    H+FDIY   RD +  +     C W I + G C  ++     D CL WN   +
Subjt:  DFVPISGGTTLFFCSFKWSSAFHYFDIYVFKRDIKVCK---PYCFWNITEKGACLKHR-----DFCLLWNKDDV
AT4G24974.1 Plant self-incompatibility protein S1 family2.3e-0744.44Show/hide
Query:  TLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGAC-LKHRDFCLLWN
        TLFFC F+W +   +FDI+V  RD+  C  +C W+I   G C L  R+ C  WN
Subjt:  TLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGAC-LKHRDFCLLWN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATCTTGGTTACCATGATCTTTGTCATTTGGACAGCTTCAGCTTCCGATTTCGTCCCAATTTCTGGGGGTACGACGTTGTTTTTTTGCAGCTTCAAATGGTCTAG
TGCCTTCCATTACTTTGACATCTATGTATTTAAAAGAGACATAAAGGTGTGCAAACCATACTGTTTTTGGAACATAACAGAAAAAGGGGCTTGCTTGAAACATCGTGATT
TTTGTTTACTGTGGAATAAGGACGATGTTGCCAAACATATGTTGTTGGGTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATCTTGGTTACCATGATCTTTGTCATTTGGACAGCTTCAGCTTCCGATTTCGTCCCAATTTCTGGGGGTACGACGTTGTTTTTTTGCAGCTTCAAATGGTCTAG
TGCCTTCCATTACTTTGACATCTATGTATTTAAAAGAGACATAAAGGTGTGCAAACCATACTGTTTTTGGAACATAACAGAAAAAGGGGCTTGCTTGAAACATCGTGATT
TTTGTTTACTGTGGAATAAGGACGATGTTGCCAAACATATGTTGTTGGGTGATTAA
Protein sequenceShow/hide protein sequence
MMILVTMIFVIWTASASDFVPISGGTTLFFCSFKWSSAFHYFDIYVFKRDIKVCKPYCFWNITEKGACLKHRDFCLLWNKDDVAKHMLLGD