CuGenDBv2

Gene ID	HG10010093
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	small acidic protein 1
Genome location	Chr06:18265637..18265825
RNA-Seq Expression	HG10010093
Synteny	HG10010093
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6593800.1 Small acidic protein 2, partial [Cucurbita argyrosperma subsp. sororia]

6.5e-24

96.77

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

KAG7026131.1 Small acidic protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.5e-24

96.77

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

XP_022964281.1 small acidic protein 1 [Cucurbita moschata]

6.5e-24

96.77

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

XP_023513491.1 small acidic protein 1 [Cucurbita pepo subsp. pepo]

1.4e-23

95.16

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLAD+DFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

XP_038875245.1 small acidic protein 1 [Benincasa hispida]

3.8e-24

98.39

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAELEE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNK1 Uncharacterized protein

4.5e-23

95.16

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MR +PMEFFAELEE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

A0A1S3CCM1 small acidic protein 1

5.9e-23

93.55

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MR +PMEFFAELEE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

A0A5A7SMJ5 Small acidic protein 1

5.9e-23

93.55

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MR +PMEFFAELEE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

A0A6J1HIH2 small acidic protein 1

3.1e-24

96.77

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

A0A6J1KE12 small acidic protein 1

3.1e-24

96.77

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

SwissProt top hits

e value

%identity

Alignment

Q1ECS0 Small acidic protein 2

9.1e-05

44.93

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Query:  MRP-TPMEFFAELEEHGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDIN
        MRP    +F  E+E  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSDIN
Subjt:  MRP-TPMEFFAELEEHGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDIN

Q9T0H2 Small acidic protein 1

9.7e-15

58.06

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRP  ++  +E+++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+DIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

Arabidopsis top hits

e value

%identity

Alignment

AT3G24280.1 small acidic protein 2

6.5e-06

44.93

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Query:  MRP-TPMEFFAELEEHGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDIN
        MRP    +F  E+E  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSDIN
Subjt:  MRP-TPMEFFAELEEHGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDIN

AT4G13520.1 small acidic protein 1

6.9e-16

58.06

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Query:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN
        MRP  ++  +E+++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+DIN
Subjt:  MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

Sequences

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CDS sequence

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ATGAGGCCTACACCGATGGAATTCTTTGCGGAGCTGGAAGAACATGGATCGACGGTTGCCATGGACGTGGACGATGTAGACCCACTTGAGATATTGGGCGAGGGTGTCAT
CTCGGCCGAGAACAAGCTTGCCGACGCCGATTTCTTCAATTCCTTCGAGGACGATTTTGATGACTCTGACATCAACTGA

mRNA sequence

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ATGAGGCCTACACCGATGGAATTCTTTGCGGAGCTGGAAGAACATGGATCGACGGTTGCCATGGACGTGGACGATGTAGACCCACTTGAGATATTGGGCGAGGGTGTCAT
CTCGGCCGAGAACAAGCTTGCCGACGCCGATTTCTTCAATTCCTTCGAGGACGATTTTGATGACTCTGACATCAACTGA

Protein sequence

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MRPTPMEFFAELEEHGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDIN

HG10010093 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome