CuGenDBv2

Gene ID	HG10010101
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	40S ribosomal protein S3a
Genome location	Chr06:18390875..18391628
RNA-Seq Expression	HG10010101
Synteny	HG10010101
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005829 - cytosol (cellular component) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001593 - Ribosomal protein S3Ae

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134125.1 40S ribosomal protein S3a [Cucumis sativus]

3.9e-73

65.02

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF+ISLADL +DEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----

Query:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                        Q ++T YAQSSQI+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA + AVEGATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

XP_008438626.1 PREDICTED: 40S ribosomal protein S3a [Cucumis melo]

1.3e-73

65.4

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF+ISLADL +DEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----

Query:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                        Q ++T YAQSSQI+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA +AAVEGATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

XP_022956208.1 40S ribosomal protein S3a-like [Cucurbita moschata]

1.5e-72

64.64

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF++SLADL DDEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----

Query:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                        Q ++T YAQSSQI+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA +AA E ATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

XP_022979234.1 40S ribosomal protein S3a-like [Cucurbita maxima]

1.5e-72

64.64

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF++SLADL DDEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----

Query:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                        Q ++T YAQSSQI+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA +AA E ATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

XP_038875051.1 40S ribosomal protein S3a [Benincasa hispida]

4.6e-74

65.78

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF+ISLADL DDEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----

Query:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                        Q ++T YAQSSQI+QIR KMREIMINQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA +AAVEGATE+VGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L4P6 40S ribosomal protein S3a

1.9e-73

65.02

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF+ISLADL +DEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----

Query:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                        Q ++T YAQSSQI+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA + AVEGATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

A0A1S3AXI4 40S ribosomal protein S3a

6.5e-74

65.4

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF+ISLADL +DEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----

Query:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                        Q ++T YAQSSQI+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA +AAVEGATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

A0A5D3CZ21 40S ribosomal protein S3a

1.9e-73

65.02

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF+ISLADL +DEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----

Query:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                        Q ++T YAQSSQI+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA + AVEGATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

A0A6J1GW62 40S ribosomal protein S3a

7.2e-73

64.64

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF++SLADL DDEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----

Query:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                        Q ++T YAQSSQI+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA +AA E ATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

A0A6J1IW45 40S ribosomal protein S3a

7.2e-73

64.64

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNV KTLVT TQGTK ASEGLKH VF++SLADL DDEEHAYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNA----

Query:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                        Q ++T YAQSSQI+QIR KMREIM+NQASSCDLK+LVRKFIPESIG  KEIE
Subjt:  -----------------------------------------------KQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM   G     +G ++ERPA +AA E ATEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

SwissProt top hits

e value

%identity

Alignment

A5B4K1 40S ribosomal protein S3a-1

3.5e-69

60.08

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKA DPFAKKDWYDIKAPSVF V+NV KTLV+ TQGTK ASEGLKH VF+ISLADL  DE+ AYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ----------------------------------------------AKQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                        Q++KT YAQSSQI+QIR KMREIM N A+SCDLK+LV+KFIPESIG  +EIE
Subjt:  ----------------------------------------------AKQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNV+I+KVKILKAPK+ LGKLM   G     +G +LERPA +   EG TEV+GA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

P33444 40S ribosomal protein S3a

1.5e-67

58.33

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKA DPFAKKDWYDIKAPSVF+V+NV KTLVT TQGTK ASEGL+H VF+ISLADL  DE+H++RKI LRA+D+QG+N     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ----------------------------------------------AKQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                      A Q ++T YAQSSQI+QIR KMREIM+NQA SCDLK LV+KFIPESIG  +EIE
Subjt:  ----------------------------------------------AKQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLMG-----GSRRLLGRLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ LGKLM          +  +L+RPA +A  E  TEV+GA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLMG-----GSRRLLGRLERPAGKAAVEGATEVVGA

P49198 40S ribosomal protein S3a

8.7e-68

58.94

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKA DPF+KKDWYDIKAPS+F  +NV KTLVT TQGTK ASEGLKH VF++SLADL +DE+H+YRKI LRA+DVQG+N     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ----------------------------------------------AKQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                      A Q ++T YAQSSQIKQIR KMREIM+ QA +CDLK+LV+KFIPESIG  +EIE
Subjt:  ----------------------------------------------AKQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILKAPK+ +GKLM   G     +G +L+RPA +AA E ATEV+GA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

Q8GTE3 40S ribosomal protein S3a

5.1e-68

58.94

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKA DPF+KKDWYDIKAPSVF VKNV KTLV+ TQGTK ASEGLKH VF+ISLADL  DE++A+RKI LRA+DVQG+N     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ----------------------------------------------AKQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                      + Q ++T YAQSSQI+QIR KMREIM+NQA+SCDLK+LVRKFIPE IG  KEIE
Subjt:  ----------------------------------------------AKQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI+PLQNVFI+KVKILK+PK+ LGKLM   G     +G ++E PA +  VEG  E+VGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

Q9MBB3 40S ribosomal protein S3a

5.7e-67

59.7

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKGKKGGKKKATDPFAKKDWYDIKAP+VF  KNV KTLV+ TQGTK ASEGLKH VF++ LADL  DE+ AYRKI LRA+DVQG+N     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ----------------------------------------------AKQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                      A Q ++T YAQSSQI+QIR KM EIM NQASSCDLK+LV KFIPESIG  +EIE
Subjt:  ----------------------------------------------AKQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA
        KATSSI PLQNVFI+KVKILKAPK+ +GKLM   G     +G +LERP  +  VEG TEVVGA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLM---GGSRRLLG-RLERPAGKAAVEGATEVVGA

Arabidopsis top hits

e value

%identity

Alignment

AT3G04840.1 Ribosomal protein S3Ae

2.2e-66

55.3

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKG+KGGKKKA DPF+KKDWYD+KAPS+FT +NV KTLV+ TQGTK ASEGLKH VF++SLADL  DE++AYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ----------------------------------------------AKQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                      A Q ++T YAQSSQI+QIR KMR+IM+ +ASSCDLK LV KFIPE+IG  +EIE
Subjt:  ----------------------------------------------AKQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLMG-----GSRRLLGRLERPAGKAAVEGATEVVGA
        KAT  I+PLQNVFI+KVKILKAPK+ LGKLM       +  +  +++RPA + AVE  TE++GA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLMG-----GSRRLLGRLERPAGKAAVEGATEVVGA

AT4G34670.1 Ribosomal protein S3Ae

1.2e-64

54.55

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Query:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----
        MAVGKNK+ISKG+KGGKKKA DPF+KKDWYD+KAP  FT +NV KTLV+ TQGTK ASEGLKH VF++SLADL +DE++AYRKI LRA+DVQGRN     
Subjt:  MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRN-----

Query:  ----------------------------------------------AKQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE
                                                      A Q ++T YAQSSQI+QIR KM EIM+ +ASSCDLK+LV KFIPE+IG  +EIE
Subjt:  ----------------------------------------------AKQSEKTYYAQSSQIKQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIE

Query:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLMG-----GSRRLLGRLERPAGKAAVEGATEVVGA
        KAT  I+PLQNVFI+KVKILKAPK+ LGKLM       +  +  +++RPA +  VE  TE++GA
Subjt:  KATSSIHPLQNVFIQKVKILKAPKYGLGKLMG-----GSRRLLGRLERPAGKAAVEGATEVVGA

Sequences

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CDS sequence

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ATGGCCGTCGGCAAGAACAAGCAGATTTCAAAGGGAAAGAAGGGTGGCAAGAAGAAAGCCACCGATCCATTTGCCAAGAAAGACTGGTATGATATCAAGGCTCCTTCAGT
TTTCACTGTTAAGAATGTGAAAAAGACTCTTGTTACACACACTCAGGGTACCAAGTTTGCATCTGAAGGACTCAAACATAGTGTCTTCAAGATCTCTTTGGCTGATCTTC
ATGATGATGAAGAGCATGCTTACAGAAAGATTCCATTGAGAGCAAAAGATGTTCAAGGGAGGAATGCCAAACAAAGTGAAAAGACCTATTATGCGCAATCCAGCCAGATC
AAGCAGATCCGCTGCAAGATGAGAGAGATCATGATCAACCAAGCTTCCTCTTGTGATTTGAAGCAATTGGTTCGCAAGTTCATTCCAGAGTCAATTGGCAAGGACAAGGA
GATCGAAAAGGCAACATCCAGTATCCACCCACTTCAAAATGTGTTTATCCAAAAAGTTAAAATTTTGAAAGCTCCCAAATACGGTCTTGGGAAGTTAATGGGAGGTTCAC
GGAGATTACTCGGAAGACTTGAGAGACCTGCTGGCAAAGCTGCAGTAGAGGGGGCTACTGAAGTTGTTGGAGCTTGA

mRNA sequence

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Protein sequence

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MAVGKNKQISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVKKTLVTHTQGTKFASEGLKHSVFKISLADLHDDEEHAYRKIPLRAKDVQGRNAKQSEKTYYAQSSQI
KQIRCKMREIMINQASSCDLKQLVRKFIPESIGKDKEIEKATSSIHPLQNVFIQKVKILKAPKYGLGKLMGGSRRLLGRLERPAGKAAVEGATEVVGA

HG10010101 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome