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HG10010142 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010142
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionProtein Ycf2-like
Genome locationChr06:18888526..18889733
RNA-Seq ExpressionHG10010142
SyntenyHG10010142
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]1.4e-0849.37Show/hide
Query:  ERINSKRQPKKRERSETTLDDTLYLMPTSKRDEPLRINLEGKLEVIDKLKERLGP-LIEKFRETLFGHYLDFTITNQSS
        +R    + P   E+SE    D++YLM + +R+EPL+INL  K  VI+K+KE LG  LI +FRE +FGH+L+ +ITNQSS
Subjt:  ERINSKRQPKKRERSETTLDDTLYLMPTSKRDEPLRINLEGKLEVIDKLKERLGP-LIEKFRETLFGHYLDFTITNQSS
TrEMBL top hitse value%identityAlignment
A0A5A7U047 Protein Ycf2-like6.6e-0949.37Show/hide
Query:  ERINSKRQPKKRERSETTLDDTLYLMPTSKRDEPLRINLEGKLEVIDKLKERLGP-LIEKFRETLFGHYLDFTITNQSS
        +R    + P   E+SE    D++YLM + +R+EPL+INL  K  VI+K+KE LG  LI +FRE +FGH+L+ +ITNQSS
Subjt:  ERINSKRQPKKRERSETTLDDTLYLMPTSKRDEPLRINLEGKLEVIDKLKERLGP-LIEKFRETLFGHYLDFTITNQSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGTCTTTTGGTTGAAAGAATCAACTCGAAAAGACAACCTAAGAAAAGAGAAAGGAGTGAAACGACCCTTGATGACACATTGTATTTAATGCCAACATCAAAACG
GGATGAACCCCTACGGATAAACCTAGAAGGAAAATTAGAGGTAATAGATAAACTCAAGGAGAGACTTGGACCCCTTATAGAAAAGTTTAGGGAAACTCTATTTGGTCACT
ACCTTGACTTCACCATAACAAATCAGTCTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGTCTTTTGGTTGAAAGAATCAACTCGAAAAGACAACCTAAGAAAAGAGAAAGGAGTGAAACGACCCTTGATGACACATTGTATTTAATGCCAACATCAAAACG
GGATGAACCCCTACGGATAAACCTAGAAGGAAAATTAGAGGTAATAGATAAACTCAAGGAGAGACTTGGACCCCTTATAGAAAAGTTTAGGGAAACTCTATTTGGTCACT
ACCTTGACTTCACCATAACAAATCAGTCTTCCTAA
Protein sequenceShow/hide protein sequence
MTSLLVERINSKRQPKKRERSETTLDDTLYLMPTSKRDEPLRINLEGKLEVIDKLKERLGPLIEKFRETLFGHYLDFTITNQSS