CuGenDBv2

Gene ID	HG10010158
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Myb-related transcription factor LBM2
Genome location	Chr06:19044119..19044628
RNA-Seq Expression	HG10010158
Synteny	HG10010158
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0009409 - response to cold (biological process) GO:0009414 - response to water deprivation (biological process) GO:0009651 - response to salt stress (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001005 - SANT/Myb domain IPR009057 - Homeobox-like domain superfamily IPR017930 - Myb domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004147145.1 transcription factor MYB14 [Cucumis sativus]

3.5e-47

100

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

XP_008460645.1 PREDICTED: myb-related protein Myb4-like [Cucumis melo]

3.5e-47

100

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

XP_022959123.1 transcription factor MYB15-like [Cucurbita moschata]

8.5e-46

97.73

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        M RAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYL+PDIKRGNFTKEEEDAIINLHELLGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

XP_023000542.1 transcription factor MYB30-like [Cucurbita maxima]

8.5e-46

95.45

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGRAPCCEKMGLK+GPWSPEEDRILTNF+Q+HGH+NWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

XP_038875538.1 transcription factor MYB14-like [Benincasa hispida]

8.5e-46

96.59

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGRAPCCEKMGLKKGPWSPEEDRILTNFI NHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDI+RGNFTKEEED IINLHELLGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNN9 Uncharacterized protein

1.7e-47

100

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

A0A1S3CCG5 myb-related protein Myb4-like

1.7e-47

100

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

A0A6J1H520 transcription factor MYB15-like

4.1e-46

97.73

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        M RAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYL+PDIKRGNFTKEEEDAIINLHELLGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

A0A6J1KDX9 transcription factor MYB30-like

4.1e-46

95.45

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGRAPCCEKMGLK+GPWSPEEDRILTNF+Q+HGH+NWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

A0A6J1KWP0 transcription factor MYB15-like

4.1e-46

97.73

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        M RAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYL+PDIKRGNFTKEEEDAIINLHELLGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

SwissProt top hits

e value

%identity

Alignment

Q6K1S6 Transcription factor MYB30

9.2e-43

85.23

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGRAPCCEKMGLK+GPW+ EEDRIL   I+ HGHSNWRALP+QAGLLRCGKSCRLRW NYLRPDIKRGNFT+EEEDAII+LH+LLGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

Q7XBH4 Transcription factor MYB4

1.4e-43

86.36

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGRAPCCEKMGLKKGPW+PEED++L   IQ HGH NWRALPKQAGLLRCGKSCRLRW NYLRPDIKRGNF+KEEED II+LHELLGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

Q9LNC9 Transcription factor MYB13

1.1e-40

82.95

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGR PCCEK+GLKKGPWS EEDRIL N+I  HGH NWRALPK AGLLRCGKSCRLRW NYLRPDIKRGNFT  EED II+LH+LLGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

Q9LTC4 Transcription factor MYB15

9.8e-45

87.5

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGRAPCCEKMGLK+GPW+PEED+IL +FI NHGHSNWRALPKQAGLLRCGKSCRLRW NYL+PDIKRGNFTKEEEDAII+LH++LGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

Q9SJX8 Transcription factor MYB14

5.0e-41

81.82

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGRAPCCEKMG+K+GPW+PEED+IL N+I  +GHSNWRALPK AGLLRCGKSCRLRW NYLRPDIKRGNFT +EE  IINLHE LGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

Arabidopsis top hits

e value

%identity

Alignment

AT1G06180.1 myb domain protein 13

8.0e-42

82.95

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGR PCCEK+GLKKGPWS EEDRIL N+I  HGH NWRALPK AGLLRCGKSCRLRW NYLRPDIKRGNFT  EED II+LH+LLGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

AT2G31180.1 myb domain protein 14

3.6e-42

81.82

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGRAPCCEKMG+K+GPW+PEED+IL N+I  +GHSNWRALPK AGLLRCGKSCRLRW NYLRPDIKRGNFT +EE  IINLHE LGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

AT3G02940.1 myb domain protein 107

2.0e-40

78.41

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGR+PCC++ GLKKGPW+PEED+ L N I+ HGH +WRALPKQAGL RCGKSCRLRWTNYLRPDIKRGNFT EEE  IINLH LLGN+
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

AT3G23250.1 myb domain protein 15

6.9e-46

87.5

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGRAPCCEKMGLK+GPW+PEED+IL +FI NHGHSNWRALPKQAGLLRCGKSCRLRW NYL+PDIKRGNFTKEEEDAII+LH++LGNR
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

AT5G16770.1 myb domain protein 9

3.7e-39

77.27

Show/hide

Query:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR
        MGR+PCC++ GLKKGPW+ EED  L + IQ HGH +WRALPKQAGL RCGKSCRLRWTNYLRPDIKRGNFT+EEE  IINLH LLGN+
Subjt:  MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGAGAGCTCCTTGTTGTGAGAAAATGGGGTTGAAGAAAGGGCCTTGGTCTCCTGAAGAAGATAGAATTTTGACCAATTTTATTCAGAATCATGGCCATAGCAATTG
GCGAGCTCTTCCTAAACAAGCTGGTCTTTTAAGATGTGGGAAAAGCTGTAGACTTCGTTGGACAAACTATTTGAGACCTGATATTAAGAGAGGCAACTTCACCAAAGAAG
AAGAAGATGCCATTATTAACCTACACGAATTGCTTGGCAATAGGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGRAPCCEKMGLKKGPWSPEEDRILTNFIQNHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTKEEEDAIINLHELLGNR

HG10010158 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome