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HG10010166 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010166
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPathogen induced 4 protein
Genome locationChr06:19199311..19199580
RNA-Seq ExpressionHG10010166
SyntenyHG10010166
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABF19725.1 pathogen induced 4 protein [Cucumis sativus]1.5e-1365.17Show/hide
Query:  MSKKYLVILVLGVILLSTQVLARPYYLPEIHEKLIPSATVSSAVGETLIKIPPRLKDLIRKKPPKFPKINLPPPPPPRRVRRPKPPSSN
        MS K+LVIL+LGVILLSTQV+ARPYYL E H +L PSATV SAVGE+L K+PP LK +  KKPPK          PPR  RR KPPSSN
Subjt:  MSKKYLVILVLGVILLSTQVLARPYYLPEIHEKLIPSATVSSAVGETLIKIPPRLKDLIRKKPPKFPKINLPPPPPPRRVRRPKPPSSN

KGN61604.1 hypothetical protein Csa_006693 [Cucumis sativus]1.1e-1157.84Show/hide
Query:  MSKKYLVI-LVLGVILLSTQVLARPYYLPEIHEKLIPSATVSSAVGETLI--------KIPPRLKDLIRKKPPKFPKIN----LPPPPPPRRVRRPKPPS
        MS+KYLVI L+LGVILLSTQV+ARPYYL E H KL PSATVS+A  + +I        K  P+      KK PKFPK+      PPPPPPR VR  +PPS
Subjt:  MSKKYLVI-LVLGVILLSTQVLARPYYLPEIHEKLIPSATVSSAVGETLI--------KIPPRLKDLIRKKPPKFPKIN----LPPPPPPRRVRRPKPPS

Query:  SN
        SN
Subjt:  SN

TYK15521.1 Cell division protein ftsH, putative isoform 3 [Cucumis melo var. makuwa]1.0e-0662.5Show/hide
Query:  VLARPYYLPEIHEKLIPSATVSSAVGETLIKIPPRLKDLIRKKPPKFPKINLPPPP
        V+AR YYLPE H +L PSATV SAVG++L K+PP LK    KK P+ PKI  PPPP
Subjt:  VLARPYYLPEIHEKLIPSATVSSAVGETLIKIPPRLKDLIRKKPPKFPKINLPPPP

XP_016902583.1 PREDICTED: uncharacterized protein LOC107991740 [Cucumis melo]9.6e-1367.11Show/hide
Query:  MSKKYLVILVLGVILL-STQVLARPYYLPEIHEKLIPSATVSSAVGETLIKIPPRLKDLIRKKPPKFPKINLPPPP
        MS K+LVIL+LGVILL STQV+AR YYLPE H +L PSATV SAVG++L K+PP LK    KK P+ PKI  PPPP
Subjt:  MSKKYLVILVLGVILL-STQVLARPYYLPEIHEKLIPSATVSSAVGETLIKIPPRLKDLIRKKPPKFPKINLPPPP

TrEMBL top hitse value%identityAlignment
A0A0A0LKM8 Uncharacterized protein5.1e-1257.84Show/hide
Query:  MSKKYLVI-LVLGVILLSTQVLARPYYLPEIHEKLIPSATVSSAVGETLI--------KIPPRLKDLIRKKPPKFPKIN----LPPPPPPRRVRRPKPPS
        MS+KYLVI L+LGVILLSTQV+ARPYYL E H KL PSATVS+A  + +I        K  P+      KK PKFPK+      PPPPPPR VR  +PPS
Subjt:  MSKKYLVI-LVLGVILLSTQVLARPYYLPEIHEKLIPSATVSSAVGETLI--------KIPPRLKDLIRKKPPKFPKIN----LPPPPPPRRVRRPKPPS

Query:  SN
        SN
Subjt:  SN

A0A1S4E2Y7 uncharacterized protein LOC1079917404.7e-1367.11Show/hide
Query:  MSKKYLVILVLGVILL-STQVLARPYYLPEIHEKLIPSATVSSAVGETLIKIPPRLKDLIRKKPPKFPKINLPPPP
        MS K+LVIL+LGVILL STQV+AR YYLPE H +L PSATV SAVG++L K+PP LK    KK P+ PKI  PPPP
Subjt:  MSKKYLVILVLGVILL-STQVLARPYYLPEIHEKLIPSATVSSAVGETLIKIPPRLKDLIRKKPPKFPKINLPPPP

A0A5D3CUG0 Cell division protein ftsH, putative isoform 35.0e-0762.5Show/hide
Query:  VLARPYYLPEIHEKLIPSATVSSAVGETLIKIPPRLKDLIRKKPPKFPKINLPPPP
        V+AR YYLPE H +L PSATV SAVG++L K+PP LK    KK P+ PKI  PPPP
Subjt:  VLARPYYLPEIHEKLIPSATVSSAVGETLIKIPPRLKDLIRKKPPKFPKINLPPPP

A0MCW3 Pathogen induced 4 protein7.2e-1465.17Show/hide
Query:  MSKKYLVILVLGVILLSTQVLARPYYLPEIHEKLIPSATVSSAVGETLIKIPPRLKDLIRKKPPKFPKINLPPPPPPRRVRRPKPPSSN
        MS K+LVIL+LGVILLSTQV+ARPYYL E H +L PSATV SAVGE+L K+PP LK +  KKPPK          PPR  RR KPPSSN
Subjt:  MSKKYLVILVLGVILLSTQVLARPYYLPEIHEKLIPSATVSSAVGETLIKIPPRLKDLIRKKPPKFPKINLPPPPPPRRVRRPKPPSSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAAAAAATATTTGGTTATTCTTGTTCTTGGAGTGATTCTTCTTAGCACCCAAGTTCTTGCTCGACCTTATTACTTGCCGGAGATCCACGAGAAACTCATTCCCTC
CGCCACTGTCTCATCGGCGGTCGGGGAAACTTTGATAAAAATCCCACCCAGGTTGAAGGATCTTATCCGCAAAAAACCTCCCAAATTCCCAAAAATCAACTTGCCGCCGC
CACCACCACCTCGGCGGGTCCGCAGACCCAAGCCACCTTCTTCCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAAAAAATATTTGGTTATTCTTGTTCTTGGAGTGATTCTTCTTAGCACCCAAGTTCTTGCTCGACCTTATTACTTGCCGGAGATCCACGAGAAACTCATTCCCTC
CGCCACTGTCTCATCGGCGGTCGGGGAAACTTTGATAAAAATCCCACCCAGGTTGAAGGATCTTATCCGCAAAAAACCTCCCAAATTCCCAAAAATCAACTTGCCGCCGC
CACCACCACCTCGGCGGGTCCGCAGACCCAAGCCACCTTCTTCCAACTGA
Protein sequenceShow/hide protein sequence
MSKKYLVILVLGVILLSTQVLARPYYLPEIHEKLIPSATVSSAVGETLIKIPPRLKDLIRKKPPKFPKINLPPPPPPRRVRRPKPPSSN