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HG10010167 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010167
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionrepetitive proline-rich cell wall protein 3-like
Genome locationChr06:19220093..19220371
RNA-Seq ExpressionHG10010167
SyntenyHG10010167
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
NP_001267631.1 uncharacterized protein LOC101210961 precursor [Cucumis sativus]7.3e-2477.08Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH
        MF KYFLLLLLAVVLLTTTQALK P +SNQE IP TD    K+PTT T    DP+EESKF++R  PYK+PYKRPPYKKYPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH

POE15980.1 hypothetical protein BV923_23575 [Pectobacterium odoriferum]1.3e-2885.87Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKRLPYKRP-YKRPPYKKYPPYKKRPPYKKYPPSS
        MFLKYFLLLLLAVVLLTTTQALK P DSNQEVIP+TDE++PTTTTT + DPDEESKFYK+  YKRP YKRPPYKKYPPYKK PPYKKYPPSS
Subjt:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKRLPYKRP-YKRPPYKKYPPYKKRPPYKKYPPSS

WP_219729224.1 hypothetical protein, partial [Pectobacterium odoriferum]1.3e-2885.87Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKRLPYKRP-YKRPPYKKYPPYKKRPPYKKYPPSS
        MFLKYFLLLLLAVVLLTTTQALK P DSNQEVIP+TDE++PTTTTT + DPDEESKFYK+  YKRP YKRPPYKKYPPYKK PPYKKYPPSS
Subjt:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKRLPYKRP-YKRPPYKKYPPYKKRPPYKKYPPSS

XP_004147144.2 repetitive proline-rich cell wall protein 3 [Cucumis sativus]1.3e-2579.17Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH
        MFLKYFLLLLLAVVLLTTTQALK P +SNQEVIP TD    K+PTT T    DP+EESKFY+R  PYK+PYKRPPYK+YPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH

XP_008460638.1 PREDICTED: repetitive proline-rich cell wall protein 3-like [Cucumis melo]1.9e-2478.49Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH
        MFLKYFLLLLLA VLL+TTQALK P  S+QEVIP TD    T  TTI  DP+EESKFY+R  PYK+PYKRPPYKKYPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH

TrEMBL top hitse value%identityAlignment
A0A0A0LI79 Uncharacterized protein6.5e-2679.17Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH
        MFLKYFLLLLLAVVLLTTTQALK P +SNQEVIP TD    K+PTT T    DP+EESKFY+R  PYK+PYKRPPYK+YPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH

A0A0A0LNP2 Uncharacterized protein3.6e-2477.08Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH
        MF KYFLLLLLAVVLLTTTQALK P +SNQE IP TD    K+PTT T    DP+EESKF++R  PYK+PYKRPPYKKYPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH

A0A1S3CE34 repetitive proline-rich cell wall protein 3-like9.3e-2578.49Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH
        MFLKYFLLLLLA VLL+TTQALK P  S+QEVIP TD    T  TTI  DP+EESKFY+R  PYK+PYKRPPYKKYPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH

A0A5A7VEY7 Repetitive proline-rich cell wall protein 3-like9.3e-2578.49Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH
        MFLKYFLLLLLA VLL+TTQALK P  S+QEVIP TD    T  TTI  DP+EESKFY+R  PYK+PYKRPPYKKYPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH

Q8H0R6 Proline-rich protein3.6e-2477.08Show/hide
Query:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH
        MF KYFLLLLLAVVLLTTTQALK P +SNQE IP TD    K+PTT T    DP+EESKF++R  PYK+PYKRPPYKKYPPYKKRPPYKKYPPSSH
Subjt:  MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTD---EKVPTTTTTIDNDPDEESKFYKR-LPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTCAAATACTTTCTTTTGCTTCTTCTCGCAGTTGTGCTTCTTACCACAACTCAAGCCCTGAAACAGCCCTTGGACTCCAATCAGGAGGTGATTCCGGTGACCGA
CGAAAAGGTTCCGACGACCACCACCACCATCGACAACGACCCGGACGAAGAATCAAAGTTCTACAAGAGGTTACCCTACAAGAGGCCTTACAAGAGGCCACCCTACAAGA
AGTATCCACCCTACAAGAAACGCCCTCCATACAAGAAGTACCCACCATCCTCCCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTCTCAAATACTTTCTTTTGCTTCTTCTCGCAGTTGTGCTTCTTACCACAACTCAAGCCCTGAAACAGCCCTTGGACTCCAATCAGGAGGTGATTCCGGTGACCGA
CGAAAAGGTTCCGACGACCACCACCACCATCGACAACGACCCGGACGAAGAATCAAAGTTCTACAAGAGGTTACCCTACAAGAGGCCTTACAAGAGGCCACCCTACAAGA
AGTATCCACCCTACAAGAAACGCCCTCCATACAAGAAGTACCCACCATCCTCCCACTAA
Protein sequenceShow/hide protein sequence
MFLKYFLLLLLAVVLLTTTQALKQPLDSNQEVIPVTDEKVPTTTTTIDNDPDEESKFYKRLPYKRPYKRPPYKKYPPYKKRPPYKKYPPSSH