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HG10010180 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010180
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionHR-like lesion-inducing protein-related protein
Genome locationChr06:19351923..19352681
RNA-Seq ExpressionHG10010180
SyntenyHG10010180
Gene Ontology termsGO:0006338 - chromatin remodeling (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0031011 - Ino80 complex (cellular component)
InterPro domainsIPR008637 - HR-like lesion-inducer


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065684.1 uncharacterized protein E6C27_scaffold90G001490 [Cucumis melo var. makuwa]1.3e-6889.61Show/hide
Query:  KIELPNFCVYVDLNKVSIFRFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILY
        +IEL  F VYVDL+K S FRFNEFGTDGG AAKELLPKLNTFRRN SARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILY
Subjt:  KIELPNFCVYVDLNKVSIFRFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILY

Query:  DFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        DFFNYGRE SQF  L+NDFILHVALAGALLFFIGTKNSI R+Q KKKAHKAKTN
Subjt:  DFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

XP_022138701.1 uncharacterized protein LOC111009799 [Momordica charantia]5.2e-6293.28Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI
        FNEFGTDGGPAAKELLPKLN FRRNVS+ FGF+LPVID+SHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFS LLNDF+
Subjt:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI

Query:  LHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        LHVALAGALLFFIGTKNSISRRQ KK+AHKAKTN
Subjt:  LHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

XP_023547571.1 uncharacterized protein LOC111806468 [Cucurbita pepo subsp. pepo]3.0e-6293.28Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI
        FNEFGTDGGPAAKEL+PK+ T RRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGR+KSQFS L+NDF+
Subjt:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI

Query:  LHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        LHVALAGALLFFIGTKNSISRRQ KKKAHKAKTN
Subjt:  LHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

XP_038906662.1 uncharacterized protein LOC120092598 isoform X1 [Benincasa hispida]2.2e-6595.62Show/hide
Query:  IFRFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLN
        +F FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPV+DVSH VAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDF+NYGREKSQFSTLLN
Subjt:  IFRFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLN

Query:  DFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        DFILHVALAGALLFFIGTKNSISRRQ KKKAHKAKTN
Subjt:  DFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

XP_038906663.1 uncharacterized protein LOC120092598 isoform X2 [Benincasa hispida]1.1e-6497.01Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI
        FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPV+DVSH VAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDF+NYGREKSQFSTLLNDFI
Subjt:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI

Query:  LHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        LHVALAGALLFFIGTKNSISRRQ KKKAHKAKTN
Subjt:  LHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

TrEMBL top hitse value%identityAlignment
A0A1S3CE23 uncharacterized protein LOC1034994052.1e-6193.28Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI
        FNEFGTDGG AAKELLPKLNTFRRN SARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRE SQF  L+NDFI
Subjt:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI

Query:  LHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        LHVALAGALLFFIGTKNSI R+Q KKKAHKAKTN
Subjt:  LHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

A0A5A7VEG5 Uncharacterized protein6.1e-6989.61Show/hide
Query:  KIELPNFCVYVDLNKVSIFRFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILY
        +IEL  F VYVDL+K S FRFNEFGTDGG AAKELLPKLNTFRRN SARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILY
Subjt:  KIELPNFCVYVDLNKVSIFRFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILY

Query:  DFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        DFFNYGRE SQF  L+NDFILHVALAGALLFFIGTKNSI R+Q KKKAHKAKTN
Subjt:  DFFNYGREKSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

A0A6J1CAG6 uncharacterized protein LOC1110097992.5e-6293.28Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI
        FNEFGTDGGPAAKELLPKLN FRRNVS+ FGF+LPVID+SHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFS LLNDF+
Subjt:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI

Query:  LHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        LHVALAGALLFFIGTKNSISRRQ KK+AHKAKTN
Subjt:  LHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

A0A6J1H651 uncharacterized protein LOC1114599551.6e-6192.54Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI
        FNEFGTDGGPAAKEL+PK+ T RRNVSARFGF LPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGR+KSQFS L+NDF+
Subjt:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI

Query:  LHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        LHVALAGALLFFIGTKNSISRRQ KKKAHKAKTN
Subjt:  LHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

A0A6J1L5U1 uncharacterized protein LOC1114993952.5e-6293.28Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI
        FNEFGTDGGPAAKEL+PKL T RRNVSA+FGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGR+KSQFS L+NDF+
Subjt:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI

Query:  LHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN
        LHVALAGALLFFIGTKNSISRRQ KKKAHKAKTN
Subjt:  LHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04340.1 HR-like lesion-inducing protein-related2.3e-3658.21Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI
        FN+FGTDGGPAAKEL PKL+  + ++S+  G  LP ++V  +V A ++LKG+GGLLFV G+  GAYLL +YL + +PILYDF+NYG E  QFS LL +F+
Subjt:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI

Query:  LHVALAGALLFFIGTKNSI--SRRQLKKKAHKAK
          VAL GALLFFIG KNS   S+R LKK+  K K
Subjt:  LHVALAGALLFFIGTKNSI--SRRQLKKKAHKAK

AT3G23175.1 HR-like lesion-inducing protein-related9.2e-0933.07Show/hide
Query:  GTDGGPAAKELLPKLNTFRRNVSAR----FGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI
        G  GGP  K + P +N   +  S      FG  +   DV  +  A +S K    L F+FG  I AY LL     ST I             F T LNDF 
Subjt:  GTDGGPAAKELLPKLNTFRRNVSAR----FGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI

Query:  LHVALAGALLFFIGTKNSISRRQLKKK
         ++ L GALL++IG K+++     ++K
Subjt:  LHVALAGALLFFIGTKNSISRRQLKKK

AT3G23190.1 HR-like lesion-inducing protein-related8.3e-1038.46Show/hide
Query:  GPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDF
        G AA EL PKL  F     A             +VA  + +K +GG+LF+F + +GA LLL+Y AI +PILYDF+N   ++  F+     F
Subjt:  GPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDF

AT4G14420.1 HR-like lesion-inducing protein-related5.2e-3657.78Show/hide
Query:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI
        FN+FG DGG +AK L PK N F  +V+   G  LP +D+  LVAA ++LKGIGGLLFVFGS +GAYLLLL+ A++TPILYDF+NY  ++ +F  L + F 
Subjt:  FNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFI

Query:  LHVALAGALLFFIGTKNSISR-RQLKKKAHKAKTN
          +AL G LLFFIG KNS    RQL+KKA KAK N
Subjt:  LHVALAGALLFFIGTKNSISR-RQLKKKAHKAKTN

AT5G43460.1 HR-like lesion-inducing protein-related5.4e-3355.91Show/hide
Query:  DGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFILHVALA
        DGGPAAKEL PKL+  + ++S+R G  LP I+V  +VA  ++LKG+GGLLFV G+  GAYLL  YL +  PILYDF+NYG ++  FS LL +F+  VAL 
Subjt:  DGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGREKSQFSTLLNDFILHVALA

Query:  GALLFFIGTKNSI-SRRQLKKKAHKAK
        GALLFFIG KNS  +++ LKK+  K K
Subjt:  GALLFFIGTKNSI-SRRQLKKKAHKAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAAGATCGAACTTCCAAATTTCTGTGTTTATGTTGATCTTAATAAGGTGTCTATTTTTAGGTTCAATGAATTTGGCACTGATGGTGGACCTGCTGCAAAGGAATT
GCTCCCGAAGTTGAACACTTTTAGAAGAAACGTCTCTGCTAGATTTGGATTCGACCTACCTGTTATCGATGTTTCCCATTTAGTTGCTGCATTTCTGTCTCTTAAAGGCA
TTGGAGGCCTTCTCTTTGTATTCGGGAGTCCGATCGGAGCTTATCTTCTGCTTCTCTACTTGGCAATTAGCACCCCAATTCTGTATGACTTCTTCAACTATGGTCGTGAG
AAGTCCCAATTCAGCACACTATTGAATGATTTCATACTGCACGTGGCACTTGCTGGTGCATTGCTCTTCTTCATCGGAACGAAGAACTCCATTTCGAGGAGGCAACTGAA
GAAGAAGGCACATAAAGCCAAAACAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATAAGATCGAACTTCCAAATTTCTGTGTTTATGTTGATCTTAATAAGGTGTCTATTTTTAGGTTCAATGAATTTGGCACTGATGGTGGACCTGCTGCAAAGGAATT
GCTCCCGAAGTTGAACACTTTTAGAAGAAACGTCTCTGCTAGATTTGGATTCGACCTACCTGTTATCGATGTTTCCCATTTAGTTGCTGCATTTCTGTCTCTTAAAGGCA
TTGGAGGCCTTCTCTTTGTATTCGGGAGTCCGATCGGAGCTTATCTTCTGCTTCTCTACTTGGCAATTAGCACCCCAATTCTGTATGACTTCTTCAACTATGGTCGTGAG
AAGTCCCAATTCAGCACACTATTGAATGATTTCATACTGCACGTGGCACTTGCTGGTGCATTGCTCTTCTTCATCGGAACGAAGAACTCCATTTCGAGGAGGCAACTGAA
GAAGAAGGCACATAAAGCCAAAACAAACTAG
Protein sequenceShow/hide protein sequence
MNKIELPNFCVYVDLNKVSIFRFNEFGTDGGPAAKELLPKLNTFRRNVSARFGFDLPVIDVSHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGRE
KSQFSTLLNDFILHVALAGALLFFIGTKNSISRRQLKKKAHKAKTN