; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10010185 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010185
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionC2H2-type domain-containing protein
Genome locationChr06:19401365..19401871
RNA-Seq ExpressionHG10010185
SyntenyHG10010185
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593852.1 Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. sororia]8.9e-4465.48Show/hide
Query:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSSTFNNIP
        MDSEKLGSS  SESSS  EEQS+  V EDD  S+SF   +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  ++AS    S Q    I  STF N P
Subjt:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSSTFNNIP

Query:  YFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLGHHP
         F PLL  S+V+Y    SNP GYFQ+LGD NMN WG+DLSL+IEP+KGR  +W+G+G+DLELRLGH+P
Subjt:  YFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLGHHP

KGN61620.1 hypothetical protein Csa_006775 [Cucumis sativus]6.6e-5572.53Show/hide
Query:  MDS-EKLGSSSCSESSSELE-EQSETVVKED-----DNYSNSFTN-IIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKL-----ASSSSSSLQS
        MDS +KL  S+CS+SSS+ + EQ E   KED      NYS++F + IIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPK      +SSSSSSLQS
Subjt:  MDS-EKLGSSSCSESSSELE-EQSETVVKED-----DNYSNSFTN-IIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKL-----ASSSSSSLQS

Query:  -NQIIGSSTFNNIPYFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLW-NGDGVDLELRLGHH
         NQIIG STFNNIPYFGPLLG SQVNYQA  SN HG       FNMN WGSDLSLQI  T GRRRLW NGDGVDLELRLGHH
Subjt:  -NQIIGSSTFNNIPYFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLW-NGDGVDLELRLGHH

XP_022930490.1 probable transcriptional regulator RABBIT EARS [Cucurbita moschata]1.2e-4365.48Show/hide
Query:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSSTFNNIP
        MDSEKLGSS  SESSS   EQS+  V EDD  S+SF   +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  ++AS    S Q    I  STF N P
Subjt:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSSTFNNIP

Query:  YFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLGHHP
         F PLL  S+V+Y    SNP GYFQ+LGD NMN WG+DLSL+IEP+KGRR +W+G+G+DLELRLGH+P
Subjt:  YFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLGHHP

XP_023514446.1 probable transcriptional regulator RABBIT EARS [Cucurbita pepo subsp. pepo]2.6e-4365.48Show/hide
Query:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSSTFNNIP
        MDSEKLGSS  SESSS  EEQS+  V EDD  S+SF   +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  ++AS    S Q    I  STF N  
Subjt:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSSTFNNIP

Query:  YFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLGHHP
         F PLL  S+V+Y    SNP GYFQ+LGD NMN WG DLSL+IEP+KGRR +W+G+G+DLELRLGH+P
Subjt:  YFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLGHHP

XP_038875027.1 zinc finger protein 6-like [Benincasa hispida]6.1e-6984.71Show/hide
Query:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFT-NIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSST-FNN
        MDS++   SSCSESSSELE+  E  VKEDD YS+SFT NIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKL  SSSSSLQSNQI+G ST FN+
Subjt:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFT-NIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSST-FNN

Query:  IPYFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLGHHP
        IPYFGPLLGRSQVNYQA  SN HGYFQQLGDFNMN WGSDLSLQI PT GRR+LWNGDGVDLELRLGHHP
Subjt:  IPYFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLGHHP

TrEMBL top hitse value%identityAlignment
A0A0A0LI91 C2H2-type domain-containing protein3.2e-5572.53Show/hide
Query:  MDS-EKLGSSSCSESSSELE-EQSETVVKED-----DNYSNSFTN-IIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKL-----ASSSSSSLQS
        MDS +KL  S+CS+SSS+ + EQ E   KED      NYS++F + IIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPK      +SSSSSSLQS
Subjt:  MDS-EKLGSSSCSESSSELE-EQSETVVKED-----DNYSNSFTN-IIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKL-----ASSSSSSLQS

Query:  -NQIIGSSTFNNIPYFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLW-NGDGVDLELRLGHH
         NQIIG STFNNIPYFGPLLG SQVNYQA  SN HG       FNMN WGSDLSLQI  T GRRRLW NGDGVDLELRLGHH
Subjt:  -NQIIGSSTFNNIPYFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLW-NGDGVDLELRLGHH

A0A6J1CE07 transcriptional regulator TAC1-like7.9e-3858.76Show/hide
Query:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQI----IGSSTF
        MDSEKL  SS S+SSSE E++SE ++K D  Y    TN  KRSY CIFCKRGFTNAQALGGHMNIHRKDR NKP ++ +SSSS   S+ +    I  S F
Subjt:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQI----IGSSTF

Query:  NNIPYFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNP--WGSDLSLQIEPTKGRRR---LW--NGDGVDLELRLGH
         N  YF    GR +V+++   SNP GYFQ+LGD N     WGSDLSLQI P+KGR R   +W  NG+G+DLELRLGH
Subjt:  NNIPYFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNP--WGSDLSLQIEPTKGRRR---LW--NGDGVDLELRLGH

A0A6J1EX07 probable transcriptional regulator RABBIT EARS5.6e-4465.48Show/hide
Query:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSSTFNNIP
        MDSEKLGSS  SESSS   EQS+  V EDD  S+SF   +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  ++AS    S Q    I  STF N P
Subjt:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSSTFNNIP

Query:  YFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLGHHP
         F PLL  S+V+Y    SNP GYFQ+LGD NMN WG+DLSL+IEP+KGRR +W+G+G+DLELRLGH+P
Subjt:  YFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLGHHP

A0A6J1KKB3 zinc finger protein GIS-like1.1e-4264.29Show/hide
Query:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSSTFNNIP
        MDSEKL SS  SESSS  EEQS+  V EDD  S+SF   +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  ++AS    S QS      STF + P
Subjt:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSSTFNNIP

Query:  YFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLGHHP
         F PLL  S+V+Y+A  SNP GYFQ  G+ NMN WG DLSL+IEP+KGRR +W+G+G+DLELRLGH+P
Subjt:  YFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLGHHP

A0A6N2MQX2 C2H2-type domain-containing protein3.6e-2245.69Show/hide
Query:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPK---LASSSSSSLQSNQII------
        M+  KLGSS    S  E+  +SE  VKED   S++ T   KRSYEC FCKRGFTNAQALGGHMNIHRKDR    PK   LASSSS S  +N+ I      
Subjt:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPK---LASSSSSSLQSNQII------

Query:  --GSSTFNNI-----------PYFGPLLGRS----QVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQ-----IEPTKGRRRLWNGDGVDLELRLGH
           SST  N             YF P  G S      NY+    N  G   Q    N   WG  LSL+     I+ ++G RR+ + D VDLELRLGH
Subjt:  --GSSTFNNI-----------PYFGPLLGRS----QVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQ-----IEPTKGRRRLWNGDGVDLELRLGH

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 103.8e-0543.28Show/hide
Query:  EKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDR
        EK G     + S++     E    EDD   + +     RSY C FC+R F +AQALGGHMN+HR+DR
Subjt:  EKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDR

Q38895 Transcriptional regulator SUPERMAN5.3e-0760.47Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSS
        RSY C FCKR F +AQALGGHMN+HR+DR     + + SSSS+
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSS

Q9LHS9 Probable transcriptional regulator RABBIT EARS4.5e-0657.14Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSS
        RSY C FC R F +AQALGGHMN+HR+DR     +  S SS+
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSS

Q9SLB8 Zinc finger protein 111.4e-0431.37Show/hide
Query:  ESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDR-------------------PNKPPKLASSSSSSLQSNQIIGS
        E   +    +  ++    NY         ++Y C FC+R F +AQALGGHMN+HR+DR                    N  P  +SSSSSS  +  +  S
Subjt:  ESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDR-------------------PNKPPKLASSSSSSLQSNQIIGS

Query:  ST
         T
Subjt:  ST

Q9SR34 Transcriptional regulator TAC12.0e-0643.59Show/hide
Query:  SSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSL
        +  CS+S S+   Q       DD+ + S      RSY C FC RGF+NAQALGGHMNIHR+DR     KL   +   +
Subjt:  SSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSL

Arabidopsis top hitse value%identityAlignment
AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein3.8e-0860.47Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSS
        RSY C FCKR F +AQALGGHMN+HR+DR     + + SSSS+
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSS

AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein9.6e-1236.36Show/hide
Query:  KEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSS----SSSLQSNQIIGSSTFNNIPYFGPLLGRSQVNYQALPSNPHG
        K+ D+ S S  N  +R+Y+C  CKRGFTN QALGGH NIHR++R   P   +SS     S  L S     S+ F N P + P +          P NP  
Subjt:  KEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSS----SSSLQSNQIIGSSTFNNIPYFGPLLGRSQVNYQALPSNPHG

Query:  YFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLG
                N   +GS  S     ++G  R   G   DL L LG
Subjt:  YFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLG

AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein9.9e-0941.18Show/hide
Query:  DNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSSTFN-------NIPYFGPLLG
        D  S S++    R Y C FC+RGF+NAQALGGHMNIHRKDR     KL  ++     S   I +++ N        +P+F   +G
Subjt:  DNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSSTFN-------NIPYFGPLLG

AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein1.6e-1129.63Show/hide
Query:  ELEEQSET----VVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQ--IIGSSTFNNIPYFGPLLGRSQ
        ELE+  E+      ++D   + S T    RSY C FC+R F +AQALGGHMN+HR+DR +      S+ +++ +S    ++ +S    +P    ++  + 
Subjt:  ELEEQSET----VVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQ--IIGSSTFNNIPYFGPLLGRSQ

Query:  VNYQALP-----SNPHGYFQQLGDF-------NMNPWGSDLSLQIEPTKGRRRL-------------------WNGDGVDLELRLGHHP
         N + L       NP G F   GD        +  P     S+   P +   RL                    + D +DLELRLGHHP
Subjt:  VNYQALP-----SNPHGYFQQLGDF-------NMNPWGSDLSLQIEPTKGRRRL-------------------WNGDGVDLELRLGHHP

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein1.2e-1435.76Show/hide
Query:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSSTFNNIP
        M+ E+  SS+ SE+ +         V+     S+S + + +R YEC FCKRGFTNAQALGGHMNIHR+DR NK  K+ + +  +L       S T     
Subjt:  MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSSTFNNIP

Query:  YFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLG
            L G  QV+   L +    Y Q L   +M             T+    +  G+ +DLELRLG
Subjt:  YFGPLLGRSQVNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAGAAAAACTAGGAAGCAGTAGCTGCTCAGAGAGTTCAAGTGAATTAGAAGAACAATCAGAGACGGTAGTAAAGGAAGATGATAATTATTCAAACAGTTTCAC
CAATATTATTAAACGTTCATATGAATGCATATTTTGCAAACGTGGATTCACCAACGCTCAAGCTCTTGGAGGCCACATGAATATTCATAGAAAAGATAGACCCAATAAAC
CTCCAAAATTGGCCTCTTCTTCTTCTTCTTCTCTTCAAAGCAACCAAATAATTGGTTCATCCACTTTCAACAACATCCCCTATTTTGGACCTCTTTTGGGTAGGTCTCAA
GTGAATTATCAAGCTTTGCCTTCTAACCCACATGGCTACTTCCAACAACTTGGAGATTTTAATATGAATCCTTGGGGGTCAGATTTGAGCCTACAAATTGAACCAACCAA
GGGGAGGAGGCGTCTTTGGAATGGCGATGGTGTCGATTTGGAGCTTCGACTTGGTCATCATCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAGAAAAACTAGGAAGCAGTAGCTGCTCAGAGAGTTCAAGTGAATTAGAAGAACAATCAGAGACGGTAGTAAAGGAAGATGATAATTATTCAAACAGTTTCAC
CAATATTATTAAACGTTCATATGAATGCATATTTTGCAAACGTGGATTCACCAACGCTCAAGCTCTTGGAGGCCACATGAATATTCATAGAAAAGATAGACCCAATAAAC
CTCCAAAATTGGCCTCTTCTTCTTCTTCTTCTCTTCAAAGCAACCAAATAATTGGTTCATCCACTTTCAACAACATCCCCTATTTTGGACCTCTTTTGGGTAGGTCTCAA
GTGAATTATCAAGCTTTGCCTTCTAACCCACATGGCTACTTCCAACAACTTGGAGATTTTAATATGAATCCTTGGGGGTCAGATTTGAGCCTACAAATTGAACCAACCAA
GGGGAGGAGGCGTCTTTGGAATGGCGATGGTGTCGATTTGGAGCTTCGACTTGGTCATCATCCATAA
Protein sequenceShow/hide protein sequence
MDSEKLGSSSCSESSSELEEQSETVVKEDDNYSNSFTNIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKLASSSSSSLQSNQIIGSSTFNNIPYFGPLLGRSQ
VNYQALPSNPHGYFQQLGDFNMNPWGSDLSLQIEPTKGRRRLWNGDGVDLELRLGHHP