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HG10010194 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010194
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein SIEVE ELEMENT OCCLUSION B-like
Genome locationChr06:19511919..19512562
RNA-Seq ExpressionHG10010194
SyntenyHG10010194
Gene Ontology termsGO:0010088 - phloem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057516.1 protein SIEVE ELEMENT OCCLUSION B-like [Cucumis melo var. makuwa]1.8e-4384.96Show/hide
Query:  MSAFRPKTSATALALALSQETDKEEQ-SLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQID
        MS FRPKTSATALALAL QE DKEE+ SLKHLSDD ITNRIFTINSD ET+KIDID+YILFIESVIK+SD+IAVAS+WAKGSKGHF LAD++LKYP+QID
Subjt:  MSAFRPKTSATALALALSQETDKEEQ-SLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQID

Query:  PPICTLHQISTEV
        PPICTLHQISTE+
Subjt:  PPICTLHQISTEV

KAG7013505.1 Protein SIEVE ELEMENT OCCLUSION B [Cucurbita argyrosperma subsp. argyrosperma]1.2e-3975Show/hide
Query:  MSAFRPKTSATALALALSQETDKEEQSLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQIDP
        MS  RPK+SATALALALSQ+TDKEE  LKHLSDDVITNRIF   +D+E  KID+DNY+LFIE+V+K SDQI VAS+WA+GSKGHFVLA+D++ YPS IDP
Subjt:  MSAFRPKTSATALALALSQETDKEEQSLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQIDP

Query:  PICTLHQISTEV
        PICTLHQIS+E+
Subjt:  PICTLHQISTEV

XP_004150408.1 protein SIEVE ELEMENT OCCLUSION B [Cucumis sativus]2.7e-4485.84Show/hide
Query:  MSAFRPKTSATALALALSQETDKEEQ-SLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQID
        MS FRPKTSATALALAL QE +KEE+ +LKHLSDDVITNRIFTINSDDET+KIDID+YILFIESVIK+SD+IAVAS+WAKGSKG+FVLAD+SLKYP+QID
Subjt:  MSAFRPKTSATALALALSQETDKEEQ-SLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQID

Query:  PPICTLHQISTEV
        PPICTLHQISTE+
Subjt:  PPICTLHQISTEV

XP_008465192.1 PREDICTED: protein SIEVE ELEMENT OCCLUSION B-like [Cucumis melo]1.8e-4384.96Show/hide
Query:  MSAFRPKTSATALALALSQETDKEEQ-SLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQID
        MS FRPKTSATALALAL QE DKEE+ SLKHLSDD ITNRIFTINSD ET+KIDID+YILFIESVIK+SD+IAVAS+WAKGSKGHF LAD++LKYP+QID
Subjt:  MSAFRPKTSATALALALSQETDKEEQ-SLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQID

Query:  PPICTLHQISTEV
        PPICTLHQISTE+
Subjt:  PPICTLHQISTEV

XP_038875655.1 protein SIEVE ELEMENT OCCLUSION B-like [Benincasa hispida]4.2e-4585.71Show/hide
Query:  MSAFRPKTSATALALALSQETDKEEQSLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQIDP
        MS FRPKTSATALALAL +ETDKEEQSLK+LSDDVITNRIFTINS+DE +KIDIDNYILFI+SVIK+SD+IAVAS+WAKG+KGHF L DDSLKYPSQIDP
Subjt:  MSAFRPKTSATALALALSQETDKEEQSLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQIDP

Query:  PICTLHQISTEV
        PIC LHQISTE+
Subjt:  PICTLHQISTEV

TrEMBL top hitse value%identityAlignment
A0A1S3CNQ3 protein SIEVE ELEMENT OCCLUSION B-like8.6e-4484.96Show/hide
Query:  MSAFRPKTSATALALALSQETDKEEQ-SLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQID
        MS FRPKTSATALALAL QE DKEE+ SLKHLSDD ITNRIFTINSD ET+KIDID+YILFIESVIK+SD+IAVAS+WAKGSKGHF LAD++LKYP+QID
Subjt:  MSAFRPKTSATALALALSQETDKEEQ-SLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQID

Query:  PPICTLHQISTEV
        PPICTLHQISTE+
Subjt:  PPICTLHQISTEV

A0A5A7UTQ8 Protein SIEVE ELEMENT OCCLUSION B-like8.6e-4484.96Show/hide
Query:  MSAFRPKTSATALALALSQETDKEEQ-SLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQID
        MS FRPKTSATALALAL QE DKEE+ SLKHLSDD ITNRIFTINSD ET+KIDID+YILFIESVIK+SD+IAVAS+WAKGSKGHF LAD++LKYP+QID
Subjt:  MSAFRPKTSATALALALSQETDKEEQ-SLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQID

Query:  PPICTLHQISTEV
        PPICTLHQISTE+
Subjt:  PPICTLHQISTEV

A0A6J1EQ44 protein SIEVE ELEMENT OCCLUSION B-like3.2e-3063.89Show/hide
Query:  RPKTSATALALALSQETDKEEQSLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQIDPPICT
        RPK S   LALAL Q+TDKE+ +LKHLSDDVI N +FT + DDETIKID+++YI FIE+VIK+SDQI+ AS+WA+GSK H  L+DDS  Y S I+PP+CT
Subjt:  RPKTSATALALALSQETDKEEQSLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQIDPPICT

Query:  LHQISTEV
        LH IS ++
Subjt:  LHQISTEV

A0A6J1H3Z4 protein SIEVE ELEMENT OCCLUSION B-like1.3e-3974.11Show/hide
Query:  MSAFRPKTSATALALALSQETDKEEQSLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQIDP
        MS  RPK+SA ALALALSQ+TDKEE  LKHLSDDVITNRIF   +D+E  KID+DNY+LFIE+V+K SDQI VAS+WA+GSKGHFVLA+D++ YPS IDP
Subjt:  MSAFRPKTSATALALALSQETDKEEQSLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQIDP

Query:  PICTLHQISTEV
        PICTLHQIS+E+
Subjt:  PICTLHQISTEV

A0A6J1KWJ8 protein SIEVE ELEMENT OCCLUSION B-like3.5e-3771.68Show/hide
Query:  MSAFRPKTSATALALALSQETDKEEQSLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQ-ID
        MS  R K+SATALALALSQ+TDKEE  LKHLSDDVITNRIF   +D+E +KID+DNY++FIE+V+K SDQI VAS+WA+GSKG+FVLA+D++ YPS  ID
Subjt:  MSAFRPKTSATALALALSQETDKEEQSLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQ-ID

Query:  PPICTLHQISTEV
        PPICTLHQIS+E+
Subjt:  PPICTLHQISTEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCATTTCGTCCCAAGACCTCGGCCACTGCTTTGGCGCTTGCTTTATCACAAGAAACCGACAAGGAAGAGCAGAGTCTAAAGCATTTGTCCGACGACGTTATCAC
GAATCGTATATTCACCATAAACAGCGACGATGAGACGATAAAGATCGACATTGATAACTACATTTTGTTCATCGAAAGCGTCATCAAAACCTCAGATCAGATTGCTGTTG
CTTCAAATTGGGCCAAAGGAAGCAAAGGGCATTTTGTATTGGCAGATGACTCCTTGAAATATCCCTCCCAAATTGATCCACCAATTTGCACCCTTCATCAAATCTCAACA
GAGGTCTTTAATTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCATTTCGTCCCAAGACCTCGGCCACTGCTTTGGCGCTTGCTTTATCACAAGAAACCGACAAGGAAGAGCAGAGTCTAAAGCATTTGTCCGACGACGTTATCAC
GAATCGTATATTCACCATAAACAGCGACGATGAGACGATAAAGATCGACATTGATAACTACATTTTGTTCATCGAAAGCGTCATCAAAACCTCAGATCAGATTGCTGTTG
CTTCAAATTGGGCCAAAGGAAGCAAAGGGCATTTTGTATTGGCAGATGACTCCTTGAAATATCCCTCCCAAATTGATCCACCAATTTGCACCCTTCATCAAATCTCAACA
GAGGTCTTTAATTATTAG
Protein sequenceShow/hide protein sequence
MSAFRPKTSATALALALSQETDKEEQSLKHLSDDVITNRIFTINSDDETIKIDIDNYILFIESVIKTSDQIAVASNWAKGSKGHFVLADDSLKYPSQIDPPICTLHQIST
EVFNY