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HG10010195 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010195
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein SIEVE ELEMENT OCCLUSION B-like
Genome locationChr06:19539883..19540122
RNA-Seq ExpressionHG10010195
SyntenyHG10010195
Gene Ontology termsGO:0010088 - phloem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593861.1 Protein SIEVE ELEMENT OCCLUSION B, partial [Cucurbita argyrosperma subsp. sororia]5.5e-2077.92Show/hide
Query:  MSLSVPNN-ISPLVHPKLS-ATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVTH
        MSLSVPNN I+ L HPKLS +TK+D S++HLSD TVT HIYTKHREDD VKIDVDNYIALVESII  AD+I ETVTH
Subjt:  MSLSVPNN-ISPLVHPKLS-ATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVTH

XP_023000469.1 protein SIEVE ELEMENT OCCLUSION B-like [Cucurbita maxima]3.2e-2077.92Show/hide
Query:  MSLSVPNN-ISPLVHPKLS-ATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVTH
        MSLSVPNN I+ L HPKLS +TK+D S++HLSDETVT HIYTKHREDD V+IDVDNYIALVESII  AD+I ETVTH
Subjt:  MSLSVPNN-ISPLVHPKLS-ATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVTH

XP_023515205.1 protein SIEVE ELEMENT OCCLUSION B-like [Cucurbita pepo subsp. pepo]5.5e-2077.92Show/hide
Query:  MSLSVPNN-ISPLVHPKLS-ATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVTH
        MSLSVPNN I+ L HPKLS +TK+D S++HLSD TVT HIYTKHREDD VKIDVDNYIALVESII  AD+I ETVTH
Subjt:  MSLSVPNN-ISPLVHPKLS-ATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVTH

XP_038875033.1 protein SIEVE ELEMENT OCCLUSION B-like [Benincasa hispida]2.6e-2281.08Show/hide
Query:  MSLSVPNNISPLVHPKLSATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVT
        MSLSV N I+PLVHPK  ATK+DPSL+HLSDETVT HIYTKHREDD +KIDVDNYIALVESII  AD+I ETVT
Subjt:  MSLSVPNNISPLVHPKLSATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVT

XP_038906603.1 protein SIEVE ELEMENT OCCLUSION B-like [Benincasa hispida]2.6e-2281.08Show/hide
Query:  MSLSVPNNISPLVHPKLSATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVT
        MSLSV N I+PLVHPK  ATK+DPSL+HLSDETVT HIYTKHREDD +KIDVDNYIALVESII  AD+I ETVT
Subjt:  MSLSVPNNISPLVHPKLSATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVT

TrEMBL top hitse value%identityAlignment
A0A0A0LNQ7 Uncharacterized protein2.5e-1872.97Show/hide
Query:  MSLSVPNN-ISPLVHPKLSATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETV
        MSL +PNN ++P V PKLSATK+D SL+H SDE VT+HIYTKHRED+ +KIDVDNYIALVESII  AD+I ETV
Subjt:  MSLSVPNN-ISPLVHPKLSATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETV

A0A6J1CAZ1 protein SIEVE ELEMENT OCCLUSION B-like3.9e-1975.32Show/hide
Query:  MSLSVPNN--ISPLVHPKLS-ATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVT
        MSL  P N   +PLVHPKLS  TKEDPSL+HLSDET+T HIYTKHREDD VKIDVDNY ALVESII  AD+I ETV+
Subjt:  MSLSVPNN--ISPLVHPKLS-ATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVT

A0A6J1EQZ1 protein SIEVE ELEMENT OCCLUSION B-like1.7e-1975.32Show/hide
Query:  MSLSVPNN-ISPLVHPKLS-ATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVTH
        MSLSVPNN ++ L HPKLS +TK+D S+ HLSDETVT +IYTKH EDD VKIDVDNYIALVESII  AD+I ETVTH
Subjt:  MSLSVPNN-ISPLVHPKLS-ATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVTH

A0A6J1EX23 protein SIEVE ELEMENT OCCLUSION B-like2.7e-2077.92Show/hide
Query:  MSLSVPNN-ISPLVHPKLS-ATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVTH
        MSLSVPNN I+ L HPKLS +TK+D S++HLSD TVT HIYTKHREDD VKIDVDNYIALVESII  AD+I ETVTH
Subjt:  MSLSVPNN-ISPLVHPKLS-ATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVTH

A0A6J1KK25 protein SIEVE ELEMENT OCCLUSION B-like1.6e-2077.92Show/hide
Query:  MSLSVPNN-ISPLVHPKLS-ATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVTH
        MSLSVPNN I+ L HPKLS +TK+D S++HLSDETVT HIYTKHREDD V+IDVDNYIALVESII  AD+I ETVTH
Subjt:  MSLSVPNN-ISPLVHPKLS-ATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTATCAGTTCCTAACAACATTTCTCCATTGGTTCATCCAAAACTTTCAGCCACCAAGGAAGACCCAAGCTTAAAACACTTATCTGATGAGACAGTCACCACTCA
CATTTACACAAAACACCGTGAGGATGACATAGTCAAGATTGATGTAGACAATTACATTGCACTTGTTGAAAGTATCATCATAATTGCTGATCAAATCGCCGAAACTGTTA
CCCACGTATGCTTTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTATCAGTTCCTAACAACATTTCTCCATTGGTTCATCCAAAACTTTCAGCCACCAAGGAAGACCCAAGCTTAAAACACTTATCTGATGAGACAGTCACCACTCA
CATTTACACAAAACACCGTGAGGATGACATAGTCAAGATTGATGTAGACAATTACATTGCACTTGTTGAAAGTATCATCATAATTGCTGATCAAATCGCCGAAACTGTTA
CCCACGTATGCTTTTCTTAA
Protein sequenceShow/hide protein sequence
MSLSVPNNISPLVHPKLSATKEDPSLKHLSDETVTTHIYTKHREDDIVKIDVDNYIALVESIIIIADQIAETVTHVCFS