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HG10010310 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010310
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLow-density receptor-like protein
Genome locationChr06:20975583..20975957
RNA-Seq ExpressionHG10010310
SyntenyHG10010310
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458514.1 PREDICTED: uncharacterized protein LOC103497900 isoform X1 [Cucumis melo]2.3e-4196.81Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQV
        MASSTA+ITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV DGNDGKKAGSVAIR+LLHQV
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQV
XP_008458516.1 PREDICTED: uncharacterized protein LOC103497900 isoform X2 [Cucumis melo]5.2e-4195.74Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQV
        MASSTA+ITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV DGNDGKKAGSVAIR+LLHQ+
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQV
XP_011656653.1 uncharacterized protein LOC101217077 isoform X3 [Cucumis sativus]4.0e-4195.74Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQV
        MASSTA+ITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGS AIR+LLHQ+
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQV
XP_038875265.1 uncharacterized protein LOC120067764 isoform X1 [Benincasa hispida]3.6e-4296.84Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQVL
        MASSTARITFRVIMVV LLLV FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIR+LLHQVL
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQVL
XP_038875268.1 uncharacterized protein LOC120067764 isoform X2 [Benincasa hispida]2.3e-4195.74Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQV
        MASSTARITFRVIMVV LLLV FYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIR+LLHQ+
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQV
TrEMBL top hitse value%identityAlignment
A0A0A0KBE9 Uncharacterized protein3.0e-4296.84Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQVL
        MASSTA+ITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGS AIR+LLHQVL
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQVL
A0A1S3C7I8 uncharacterized protein LOC103497900 isoform X22.5e-4195.74Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQV
        MASSTA+ITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV DGNDGKKAGSVAIR+LLHQ+
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQV
A0A1S3C994 uncharacterized protein LOC103497900 isoform X11.1e-4196.81Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQV
        MASSTA+ITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGV DGNDGKKAGSVAIR+LLHQV
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQV
A0A6J1EUV5 uncharacterized protein LOC111436812 isoform X34.8e-4090.43Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQV
        MASS ARITFRV+MVV+LLLV+FYVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSGVHDG DGKKAGSVA R+LLHQ+
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQV
A0A6J1EWN5 uncharacterized protein LOC111436812 isoform X58.1e-4090.43Show/hide
Query:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQV
        MASS ARITFRV+MVV+LLLV+FYVGRPLYWKISATVHDIRQNKQTVKEG SQIVLEAQKSVGWYHDESDSGVHDG DGKKAGSVA R+LLHQ+
Subjt:  MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18850.1 unknown protein1.4e-2865.56Show/hide
Query:  ASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLL
        +S T RI FR ++++ L++VLFYVGRPLYWKISAT+HDIR NKQ+V+EG+SQIV EAQ+SVGWYHDESDSG  +G++ KK+G    R+LL
Subjt:  ASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCATCGACGGCAAGGATTACGTTTCGCGTTATCATGGTGGTGATCCTCCTCCTCGTCTTGTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCCACTGT
ACATGATATTCGTCAGAACAAACAGACCGTCAAAGAAGGCCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAGTCGGACTCGGGCGTCC
ATGACGGAAATGATGGAAAGAAGGCCGGATCGGTTGCTATTCGGAAGCTTCTTCATCAGGTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCATCGACGGCAAGGATTACGTTTCGCGTTATCATGGTGGTGATCCTCCTCCTCGTCTTGTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCCACTGT
ACATGATATTCGTCAGAACAAACAGACCGTCAAAGAAGGCCTCTCTCAGATCGTTCTGGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAGTCGGACTCGGGCGTCC
ATGACGGAAATGATGGAAAGAAGGCCGGATCGGTTGCTATTCGGAAGCTTCTTCATCAGGTTTTGTGA
Protein sequenceShow/hide protein sequence
MASSTARITFRVIMVVILLLVLFYVGRPLYWKISATVHDIRQNKQTVKEGLSQIVLEAQKSVGWYHDESDSGVHDGNDGKKAGSVAIRKLLHQVL