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HG10010399 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010399
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description60S ribosomal protein L29
Genome locationChr06:21869679..21871862
RNA-Seq ExpressionHG10010399
SyntenyHG10010399
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002673 - Ribosomal protein L29e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022930218.1 60S ribosomal protein L29-1 [Cucurbita moschata]2.8e-0894.29Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKG+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

XP_023000055.1 60S ribosomal protein L29-1 [Cucurbita maxima]2.8e-0894.29Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKG+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

XP_023514068.1 60S ribosomal protein L29-1-like [Cucurbita pepo subsp. pepo]2.8e-0894.29Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKG+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

XP_038875270.1 60S ribosomal protein L29-1 [Benincasa hispida]1.2e-0897.14Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKG+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

XP_038875325.1 60S ribosomal protein L29-1-like [Benincasa hispida]1.2e-0897.14Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKG+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

TrEMBL top hitse value%identityAlignment
A0A6J1CB13 60S ribosomal protein L291.3e-0894.29Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKG+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

A0A6J1H4N3 60S ribosomal protein L291.3e-0894.29Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKG+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

A0A6J1KET9 60S ribosomal protein L291.3e-0894.29Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKG+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

A0A6J1KHA4 60S ribosomal protein L291.3e-0894.29Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKG+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

A0A6J1L4P4 60S ribosomal protein L291.3e-0894.29Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKG+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

SwissProt top hitse value%identityAlignment
P05747 60S ribosomal protein L297.1e-0771.43Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQ+RKAH+NGIKKP+ +++ S KG+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

Q24154 60S ribosomal protein L295.4e-0754.39Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGIRATNFVITNTY-QEGNLNTQSS
        MAKSKNHT HNQ++KAH+NGIK+P + RH ST G+    F+I   Y ++GNL+ + S
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGIRATNFVITNTY-QEGNLNTQSS

Q58DW3 60S ribosomal protein L291.6e-0674.29Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

Q84WM0 60S ribosomal protein L29-21.5e-0985.71Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+G+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

Q9M7X7 60S ribosomal protein L29-11.5e-0985.71Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+G+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

Arabidopsis top hitse value%identityAlignment
AT3G06680.1 Ribosomal L29e protein family1.1e-1085.71Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+G+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

AT3G06680.2 Ribosomal L29e protein family1.1e-1085.71Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+G+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

AT3G06700.1 Ribosomal L29e protein family1.1e-1085.71Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+G+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

AT3G06700.2 Ribosomal L29e protein family1.1e-1085.71Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+G+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI

AT3G06700.3 Ribosomal L29e protein family1.1e-1085.71Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+G+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGTCGAAGAATCACACAGCTCACAATCAATCACGCAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATTCGAGC
CACAAACTTTGTGATCACTAATACATATCAAGAAGGTAATTTGAATACTCAGTCCAGCAGACAGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGTCGAAGAATCACACAGCTCACAATCAATCACGCAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATTCGAGC
CACAAACTTTGTGATCACTAATACATATCAAGAAGGTAATTTGAATACTCAGTCCAGCAGACAGACATAA
Protein sequenceShow/hide protein sequence
MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGIRATNFVITNTYQEGNLNTQSSRQT