CuGenDBv2

Gene ID	HG10010570
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	PAP_fibrillin domain-containing protein
Genome location	Chr06:23495768..23501536
RNA-Seq Expression	HG10010570
Synteny	HG10010570
Gene Ontology terms	NA
InterPro domains	IPR006843 - Plastid lipid-associated protein/fibrillin conserved domain IPR039633 - Plastid-lipid-associated protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004140490.1 probable plastid-lipid-associated protein 11, chloroplastic [Cucumis sativus]

2.3e-105

93.9

Show/hide

Query:  MAKSLSLPSLPFISPSSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEK
        MAKSLSLPSLPFI PSSI +HLS LPKIS SSIS QSQSAK +LLTLISDQ+RGLKTQKNPQKLASIVKSID LASLGRNSVTTDDSLSATWRLLWTTEK
Subjt:  MAKSLSLPSLPFISPSSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEK

Query:  EQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD
        EQLFIIEKAHLFGT+AGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNF+FTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD
Subjt:  EQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD

Query:  YLIVERAPYTWTE
        YLIVERAPY+WTE
Subjt:  YLIVERAPYTWTE

XP_008458126.1 PREDICTED: probable plastid-lipid-associated protein 11 isoform X1 [Cucumis melo]

6.5e-108

96.24

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Query:  MAKSLSLPSLPFISPSSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEK
        MAKSLSLPSLPFISPSSI THLS LPKIS SSISIQSQSAK +LLTLISDQERGLKTQKNPQKLASIVKSID LASLGRNSVTTDDSLSATWRLLWTTEK
Subjt:  MAKSLSLPSLPFISPSSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEK

Query:  EQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD
        EQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNF+FTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD
Subjt:  EQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD

Query:  YLIVERAPYTWTE
        YLIVERAPY+WTE
Subjt:  YLIVERAPYTWTE

XP_022959112.1 probable plastid-lipid-associated protein 11, chloroplastic isoform X1 [Cucurbita moschata]

1.0e-100

91.59

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Query:  MAKSLSLPSLPFISP-SSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTE
        MAKSLSLPS PF SP SSI T LSQLPKIS SSISIQSQS KD+LL LISDQERGLKTQK+PQKLASIVKSIDALASL RNSVTTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSLPFISP-SSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRG
        KEQLFIIEKAHLFGTQAGDVLQVIDV+KKSLNNVITFPPDGVFFVRS+IEVASSQRVNF+FTSAVLRGKNWEIPLPPFGQGWF+TVYLDD+IRVVKDIR 
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRG

Query:  DYLIVERAPYTWTE
        DYLIVERAPYTW E
Subjt:  DYLIVERAPYTWTE

XP_023547719.1 probable plastid-lipid-associated protein 11, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]

1.6e-101

91.59

Show/hide

Query:  MAKSLSLPSLPFISP-SSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTE
        MAKSLSLPS PF SP SSI THLSQLPKIS SSISIQSQS +D+LL LISDQERGLKTQK+PQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSLPFISP-SSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRG
        KEQLFIIEKAHLFGTQAGDVLQVIDV+KKSLNNVITFPPDGVFFVRS+IEVASSQRVNF+FTSAVLRGKNWEIPLPPFGQGWF+TVYLD++IRVVKDIR 
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRG

Query:  DYLIVERAPYTWTE
        DYLIVERAPYTW E
Subjt:  DYLIVERAPYTWTE

XP_038876017.1 probable plastid-lipid-associated protein 11, chloroplastic isoform X1 [Benincasa hispida]

6.1e-106

93.9

Show/hide

Query:  MAKSLSLPSLPFISPSSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEK
        MAKSL LPSLPFISPSSIRTHLS LPKIS SS+SIQSQS K++LL LISDQERGLKTQK+PQKL SIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEK
Subjt:  MAKSLSLPSLPFISPSSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEK

Query:  EQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD
        EQLFIIEKAHLFGTQAGDVLQVIDV+KKSLNNVITFPPDGVFFVRSNIEVASSQRVNF+FTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD
Subjt:  EQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD

Query:  YLIVERAPYTWTE
        YLIVERAPYTW E
Subjt:  YLIVERAPYTWTE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KDV9 PAP_fibrillin domain-containing protein

1.1e-105

93.9

Show/hide

Query:  MAKSLSLPSLPFISPSSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEK
        MAKSLSLPSLPFI PSSI +HLS LPKIS SSIS QSQSAK +LLTLISDQ+RGLKTQKNPQKLASIVKSID LASLGRNSVTTDDSLSATWRLLWTTEK
Subjt:  MAKSLSLPSLPFISPSSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEK

Query:  EQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD
        EQLFIIEKAHLFGT+AGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNF+FTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD
Subjt:  EQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD

Query:  YLIVERAPYTWTE
        YLIVERAPY+WTE
Subjt:  YLIVERAPYTWTE

A0A1S3C7Q5 probable plastid-lipid-associated protein 11 isoform X1

3.2e-108

96.24

Show/hide

Query:  MAKSLSLPSLPFISPSSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEK
        MAKSLSLPSLPFISPSSI THLS LPKIS SSISIQSQSAK +LLTLISDQERGLKTQKNPQKLASIVKSID LASLGRNSVTTDDSLSATWRLLWTTEK
Subjt:  MAKSLSLPSLPFISPSSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEK

Query:  EQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD
        EQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNF+FTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD
Subjt:  EQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD

Query:  YLIVERAPYTWTE
        YLIVERAPY+WTE
Subjt:  YLIVERAPYTWTE

A0A6J1H3N2 probable plastid-lipid-associated protein 11, chloroplastic isoform X1

4.9e-101

91.59

Show/hide

Query:  MAKSLSLPSLPFISP-SSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTE
        MAKSLSLPS PF SP SSI T LSQLPKIS SSISIQSQS KD+LL LISDQERGLKTQK+PQKLASIVKSIDALASL RNSVTTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSLPFISP-SSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRG
        KEQLFIIEKAHLFGTQAGDVLQVIDV+KKSLNNVITFPPDGVFFVRS+IEVASSQRVNF+FTSAVLRGKNWEIPLPPFGQGWF+TVYLDD+IRVVKDIR 
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRG

Query:  DYLIVERAPYTWTE
        DYLIVERAPYTW E
Subjt:  DYLIVERAPYTWTE

A0A6J1KWG2 probable plastid-lipid-associated protein 11, chloroplastic isoform X1

9.2e-100

90.65

Show/hide

Query:  MAKSLSLPSLPFISP-SSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTE
        MAKSLSLPS PF SP SSI THLSQ PKI  SSISIQSQS KD+LL LISDQERGLKTQK+PQKLASIVKSIDALASL  NSVTTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSLPFISP-SSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRG
        KEQLFIIEKAHLFGTQAGDVLQVIDV+KKSLNNVITFPPDGVFFVRS+IEVASSQRVNF+FTSAVLRGKNWEIPLPPFGQGWF+TVYLDD+IRVVKDIR 
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRG

Query:  DYLIVERAPYTWTE
        DYLIVERAPYTW E
Subjt:  DYLIVERAPYTWTE

A0A6J1KYC9 probable plastid-lipid-associated protein 11, chloroplastic isoform X2

2.4e-100

91.12

Show/hide

Query:  MAKSLSLPSLPFISP-SSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTE
        MAKSLSLPS PF SP SSI THLSQ PKIS SSISIQSQS KD+LL LISDQERGLKTQK+PQKLASIVKSIDALASL  NSVTTDDSLSATWRLLWTTE
Subjt:  MAKSLSLPSLPFISP-SSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTE

Query:  KEQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRG
        KEQLFIIEKAHLFGTQAGDVLQVIDV+KKSLNNVITFPPDGVFFVRS+IEVASSQRVNF+FTSAVLRGKNWEIPLPPFGQGWF+TVYLDD+IRVVKDIR 
Subjt:  KEQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRG

Query:  DYLIVERAPYTWTE
        DYLIVERAPYTW E
Subjt:  DYLIVERAPYTWTE

SwissProt top hits

e value

%identity

Alignment

O81304 Probable plastid-lipid-associated protein 11, chloroplastic

4.4e-75

67.61

Show/hide

Query:  MAKSLSLPSLPFISPSSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEK
        MA +LSL +    SP   RT  +   + S S  +  +Q AK +LL LIS+++RGL+TQK+P+K   IV +I+++  +GR+S+TTDDSLSATWRLLWTTEK
Subjt:  MAKSLSLPSLPFISPSSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEK

Query:  EQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD
        EQLFIIEKA LFGT AGDVLQVIDV K+ LNNVITFPPDGVFFVRS+I++AS QRVNF+F SAVLRGKNWE+PLPPFG+GWF+ VY+D EIRV KDIRGD
Subjt:  EQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD

Query:  YLIVERAPYTWTE
        YLIV+RAPY WTE
Subjt:  YLIVERAPYTWTE

Q5M755 Fibrillin-5, chloroplastic

8.2e-05

23.32

Show/hide

Query:  KDELLTLISDQERGLKTQKNPQK--LASIVKSIDALASLGRNSVTTD----DSLSATWRLLWTT------EKEQLFIIEKAHLFGTQAGDVLQVIDVEKK
        K+EL   +    RG+   K+ +K  +  +VK ++      RN         D +   W+L+++T      ++ +L + +   L     GD+LQ ID+ + 
Subjt:  KDELLTLISDQERGLKTQKNPQK--LASIVKSIDALASLGRNSVTTD----DSLSATWRLLWTT------EKEQLFIIEKAHLFGTQAGDVLQVIDVEKK

Query:  SLNNVITFPP------DGVFFVRSNIEVASSQRVNFKFTSAVLR--------GKNWEIPLPPFG-QGWFDTVYLDDEIRVVKDIRGDYLIVER
           +V+ F        DG F + ++ +++S   V   + S+ ++         KN ++ L  F  +G F+  YLD++++V +D +G+  ++ER
Subjt:  SLNNVITFPP------DGVFFVRSNIEVASSQRVNFKFTSAVLR--------GKNWEIPLPPFG-QGWFDTVYLDDEIRVVKDIRGDYLIVER

Arabidopsis top hits

e value

%identity

Alignment

AT4G00030.1 Plastid-lipid associated protein PAP / fibrillin family protein

3.1e-76

67.61

Show/hide

Query:  MAKSLSLPSLPFISPSSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEK
        MA +LSL +    SP   RT  +   + S S  +  +Q AK +LL LIS+++RGL+TQK+P+K   IV +I+++  +GR+S+TTDDSLSATWRLLWTTEK
Subjt:  MAKSLSLPSLPFISPSSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEK

Query:  EQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD
        EQLFIIEKA LFGT AGDVLQVIDV K+ LNNVITFPPDGVFFVRS+I++AS QRVNF+F SAVLRGKNWE+PLPPFG+GWF+ VY+D EIRV KDIRGD
Subjt:  EQLFIIEKAHLFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGD

Query:  YLIVERAPYTWTE
        YLIV+RAPY WTE
Subjt:  YLIVERAPYTWTE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCAAATCCCTCTCCCTTCCATCGCTCCCCTTCATTTCCCCTTCTTCCATTAGAACCCATCTCTCTCAGCTCCCCAAAATCTCTCGCTCTTCCATATCCATTCAATC
TCAATCTGCCAAAGACGAGCTTCTCACCCTCATATCTGACCAAGAAAGAGGTCTCAAAACCCAGAAAAACCCTCAGAAACTTGCTTCAATTGTGAAATCAATCGACGCCT
TGGCTTCTCTGGGCCGTAATTCTGTCACTACGGACGATTCACTTTCTGCGACATGGCGTCTTCTATGGACCACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCTCAC
TTGTTTGGTACTCAAGCTGGCGACGTTTTGCAGGTGATTGATGTTGAGAAAAAAAGTCTCAATAATGTCATCACTTTTCCTCCAGATGGGGTGTTCTTCGTTCGATCCAA
CATTGAAGTTGCTTCCTCTCAGAGAGTGAATTTTAAATTTACGAGTGCTGTTCTGCGAGGAAAAAACTGGGAGATTCCTTTGCCACCATTTGGACAGGGTTGGTTTGACA
CGGTGTACCTCGATGACGAGATCCGGGTTGTAAAAGATATCCGTGGTGATTATTTGATTGTCGAACGTGCTCCCTACACTTGGACAGAATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAKSLSLPSLPFISPSSIRTHLSQLPKISRSSISIQSQSAKDELLTLISDQERGLKTQKNPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAH
LFGTQAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGDYLIVERAPYTWTE

HG10010570 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome