; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10010575 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010575
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCyclin
Genome locationChr06:23569944..23570357
RNA-Seq ExpressionHG10010575
SyntenyHG10010575
Gene Ontology termsGO:0000079 - regulation of cyclin-dependent protein serine/threonine kinase activity (biological process)
GO:0051301 - cell division (biological process)
GO:0019901 - protein kinase binding (molecular function)
InterPro domainsIPR013922 - Cyclin PHO80-like
IPR036915 - Cyclin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013796.1 Cyclin-U2-2 [Cucurbita argyrosperma subsp. argyrosperma]5.4e-4778.95Show/hide
Query:  IPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSI---SSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDR
        +PISPR LRSD+YSYSY E+ S  PLVI VVASLIERSMARNHRIAKN MS+   S    +VF+CREAPDMSIQ YLERIFRYTK  PSVYVVAYVYIDR
Subjt:  IPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSI---SSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDR

Query:  FCQHNPSFRITLTNVHRLLITTVMLASKYVEDM
        FCQ NP FRI L NVHRLLITTVM+ASKYVEDM
Subjt:  FCQHNPSFRITLTNVHRLLITTVMLASKYVEDM

XP_004140492.1 cyclin-U2-1 [Cucumis sativus]4.5e-5485Show/hide
Query:  MAKSINN--IPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCR-EAPDMSIQAYLERIFRYTKAAPSVYVV
        MA + NN  IPISPRKLRSDLYSYS++EDYSKIPLVISVVASLIER+MARNHRIA+NY   SS+  VVFDCR EAPDMSIQ YLERIFRYTKAAP VYVV
Subjt:  MAKSINN--IPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCR-EAPDMSIQAYLERIFRYTKAAPSVYVV

Query:  AYVYIDRFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM
        AYVYIDRFCQ NPSFRITL NVHRLLITTVM+ASKYVEDM
Subjt:  AYVYIDRFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM

XP_008459728.2 PREDICTED: cyclin-U2-1 [Cucumis melo]1.1e-5587.14Show/hide
Query:  MAKSINN--IPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCR-EAPDMSIQAYLERIFRYTKAAPSVYVV
        MA S +N  IPISPRKLRSDLYSYSY+EDYSKIPLVISVVASLIER+MARNHRIA+NYM  SS+  VVFDCR EAPDMSIQ YLERIFRYTKAAPSVYVV
Subjt:  MAKSINN--IPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCR-EAPDMSIQAYLERIFRYTKAAPSVYVV

Query:  AYVYIDRFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM
        AYVYIDRFCQ NPSFRITL NVHRLLITTVM+ASKYVEDM
Subjt:  AYVYIDRFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM

XP_023548344.1 cyclin-U2-1 [Cucurbita pepo subsp. pepo]4.1e-4778.95Show/hide
Query:  IPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSI---SSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDR
        +PISPR LRSD+YSYSY E+ S  PLVI VVASLIERSMARNHRIAKN MS+   S    +VF+CREAPDMSIQ+YLERIFRYTK  PSVYVVAYVYIDR
Subjt:  IPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSI---SSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDR

Query:  FCQHNPSFRITLTNVHRLLITTVMLASKYVEDM
        FCQ NP FRI L NVHRLLITTVM+ASKYVEDM
Subjt:  FCQHNPSFRITLTNVHRLLITTVMLASKYVEDM

XP_038875511.1 cyclin-U2-1 [Benincasa hispida]2.3e-5386.62Show/hide
Query:  MAKSINNIPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSI-----SSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVY
        MAKS +NIPISPRKLRSDL  YSYNED SKIPLVISVVASLIERSMARNHRIAKNYMSI     SSR  VVFDC EAPDMSIQ YLERIFRYT+AAP VY
Subjt:  MAKSINNIPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSI-----SSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVY

Query:  VVAYVYIDRFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM
        VVAYVYIDRFCQ NPSFRITL NVHRLLITTVM+ASKYVEDM
Subjt:  VVAYVYIDRFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM

TrEMBL top hitse value%identityAlignment
A0A087H599 Cyclin2.9e-4675.37Show/hide
Query:  SINNIPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYID
        S N++ ISPRKLRSDLYSYSY ED SK PLVISV++SLIER++ARN RI+K+Y         VFDCRE PDM+IQ+YLERIFRYTKA PSVYVVAYVYID
Subjt:  SINNIPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYID

Query:  RFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM
        RFCQ+N  FRI+LTNVHRLLITT+M+ASKYVEDM
Subjt:  RFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM

A0A0A0KAQ9 Cyclin2.2e-5485Show/hide
Query:  MAKSINN--IPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCR-EAPDMSIQAYLERIFRYTKAAPSVYVV
        MA + NN  IPISPRKLRSDLYSYS++EDYSKIPLVISVVASLIER+MARNHRIA+NY   SS+  VVFDCR EAPDMSIQ YLERIFRYTKAAP VYVV
Subjt:  MAKSINN--IPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCR-EAPDMSIQAYLERIFRYTKAAPSVYVV

Query:  AYVYIDRFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM
        AYVYIDRFCQ NPSFRITL NVHRLLITTVM+ASKYVEDM
Subjt:  AYVYIDRFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM

A0A1S3CAV0 Cyclin5.2e-5687.14Show/hide
Query:  MAKSINN--IPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCR-EAPDMSIQAYLERIFRYTKAAPSVYVV
        MA S +N  IPISPRKLRSDLYSYSY+EDYSKIPLVISVVASLIER+MARNHRIA+NYM  SS+  VVFDCR EAPDMSIQ YLERIFRYTKAAPSVYVV
Subjt:  MAKSINN--IPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCR-EAPDMSIQAYLERIFRYTKAAPSVYVV

Query:  AYVYIDRFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM
        AYVYIDRFCQ NPSFRITL NVHRLLITTVM+ASKYVEDM
Subjt:  AYVYIDRFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM

A0A6J1L2S6 Cyclin2.6e-4778.95Show/hide
Query:  IPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSI---SSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDR
        +PISPR LRSD+YSYSY E+ S  PLVI VVASLIERSMARNHRIAKN MS+   S    +VF+CREAPDMSIQ YLERIFRYTK  PSVYVVAYVYIDR
Subjt:  IPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSI---SSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDR

Query:  FCQHNPSFRITLTNVHRLLITTVMLASKYVEDM
        FCQ NP FRI+L NVHRLLITTVM+ASKYVEDM
Subjt:  FCQHNPSFRITLTNVHRLLITTVMLASKYVEDM

A0A6P5RWW9 Cyclin1.1e-4569.72Show/hide
Query:  MAKSINNIPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKN-----YMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVY
        M  S  ++ ISPRKLRSDLYSYSY ED S  PLV++V+ASLIERSMARN RIAK+     YMS  ++   +F+C E PDM+IQ+YLERIFRYT+A PSVY
Subjt:  MAKSINNIPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKN-----YMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVY

Query:  VVAYVYIDRFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM
        VVAYVYIDRFCQ+NP F+I +TNVHRLLITT+M+ASKYVEDM
Subjt:  VVAYVYIDRFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM

SwissProt top hitse value%identityAlignment
O80513 Cyclin-U4-11.6e-1743.75Show/hide
Query:  EDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPSFRITLTNVHRLLIT
        E+ S +  +I+ ++SL+ER +A ++ + +   + S R + VF     P ++IQ+YLERIF+Y   +PS +VVAYVY+DRF    PS  I   NVHRLLIT
Subjt:  EDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPSFRITLTNVHRLLIT

Query:  TVMLASKYVEDM
        +VM+A+K+++D+
Subjt:  TVMLASKYVEDM

Q7FAT5 Cyclin-P2-11.0e-1641.73Show/hide
Query:  KLRSDLYSYSYNEDYS---KIPLVISVVASLIERSMARNHR-IAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHN
        +L SD+Y+    +D +     P+V+SV+ASL+ER +ARN R  A      ++R    FD     DMS+ A+LER  RY   +P VYVVAY Y+DR  +  
Subjt:  KLRSDLYSYSYNEDYS---KIPLVISVVASLIERSMARNHR-IAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHN

Query:  PSFRITLTNVHRLLITTVMLASKYVED
           R+   N  RLL T +++ASK+VED
Subjt:  PSFRITLTNVHRLLITTVMLASKYVED

Q9LJ45 Cyclin-U1-16.0e-1740.57Show/hide
Query:  PLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPSFRITLTNVHRLLITTVMLAS
        P V+++++ ++E+ +ARN  +AK       + +  F    AP +SI  YLERI++YTK +P+ +VV YVYIDR    +P   +   NVHRLL+T VM+A+
Subjt:  PLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPSFRITLTNVHRLLITTVMLAS

Query:  KYVEDM
        K ++D+
Subjt:  KYVEDM

Q9M205 Cyclin-U2-25.2e-4569.4Show/hide
Query:  NNIPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSR--DIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYID
        N++ ISPRKLRSDLYSYSY ++ SK PLVISV++SLI+R++ RN RI++  +  S       +FDCRE PDM+IQ+YL RIFRYTKA PSVYVVAYVYID
Subjt:  NNIPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSR--DIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYID

Query:  RFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM
        RFCQ NP FRI+LTNVHRLLITT+M+ASKYVED+
Subjt:  RFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM

Q9SHD3 Cyclin-U2-13.9e-4871.43Show/hide
Query:  INNIPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDR
        ++++ ISPRKLRSDLYSYSY +D + +PLVISV++SLIER++ARN RI+++Y         VFDCRE PDM+IQ+YLERIFRYTKA PSVYVVAYVYIDR
Subjt:  INNIPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDR

Query:  FCQHNPSFRITLTNVHRLLITTVMLASKYVEDM
        FCQ+N  FRI+LTNVHRLLITT+M+ASKYVEDM
Subjt:  FCQHNPSFRITLTNVHRLLITTVMLASKYVEDM

Arabidopsis top hitse value%identityAlignment
AT2G44740.1 cyclin p4;11.1e-1843.75Show/hide
Query:  EDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPSFRITLTNVHRLLIT
        E+ S +  +I+ ++SL+ER +A ++ + +   + S R + VF     P ++IQ+YLERIF+Y   +PS +VVAYVY+DRF    PS  I   NVHRLLIT
Subjt:  EDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPSFRITLTNVHRLLIT

Query:  TVMLASKYVEDM
        +VM+A+K+++D+
Subjt:  TVMLASKYVEDM

AT2G45080.1 cyclin p3;12.8e-4971.43Show/hide
Query:  INNIPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDR
        ++++ ISPRKLRSDLYSYSY +D + +PLVISV++SLIER++ARN RI+++Y         VFDCRE PDM+IQ+YLERIFRYTKA PSVYVVAYVYIDR
Subjt:  INNIPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDR

Query:  FCQHNPSFRITLTNVHRLLITTVMLASKYVEDM
        FCQ+N  FRI+LTNVHRLLITT+M+ASKYVEDM
Subjt:  FCQHNPSFRITLTNVHRLLITTVMLASKYVEDM

AT3G21870.1 cyclin p2;14.3e-1840.57Show/hide
Query:  PLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPSFRITLTNVHRLLITTVMLAS
        P V+++++ ++E+ +ARN  +AK       + +  F    AP +SI  YLERI++YTK +P+ +VV YVYIDR    +P   +   NVHRLL+T VM+A+
Subjt:  PLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPSFRITLTNVHRLLITTVMLAS

Query:  KYVEDM
        K ++D+
Subjt:  KYVEDM

AT3G60550.1 cyclin p3;23.7e-4669.4Show/hide
Query:  NNIPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSR--DIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYID
        N++ ISPRKLRSDLYSYSY ++ SK PLVISV++SLI+R++ RN RI++  +  S       +FDCRE PDM+IQ+YL RIFRYTKA PSVYVVAYVYID
Subjt:  NNIPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSR--DIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYID

Query:  RFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM
        RFCQ NP FRI+LTNVHRLLITT+M+ASKYVED+
Subjt:  RFCQHNPSFRITLTNVHRLLITTVMLASKYVEDM

AT5G07450.1 cyclin p4;36.2e-1737.38Show/hide
Query:  IPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPSFRITLTNVHRLLITTVMLA
        +P VI+ ++SL++R    N  +++ +     + I  F+    P +SI++Y+ERIF+Y   + S Y+VAY+Y+DRF Q  P   I  +NVHRL+IT+V+++
Subjt:  IPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNPSFRITLTNVHRLLITTVMLA

Query:  SKYVEDM
        +K+++D+
Subjt:  SKYVEDM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGTCCATTAATAATATTCCAATTTCCCCAAGAAAGCTTCGATCTGATTTGTATTCATATTCTTACAATGAGGATTATTCTAAAATCCCATTAGTCATTAGTGT
TGTTGCTTCCTTGATCGAGAGAAGTATGGCCAGAAACCATCGGATTGCCAAAAACTACATGTCGATTTCTTCGAGGGATATTGTTGTTTTCGACTGCCGTGAGGCGCCCG
ACATGTCGATTCAGGCTTATTTGGAGAGGATATTTCGTTACACTAAAGCTGCTCCTTCTGTTTACGTTGTTGCTTATGTTTATATTGATCGCTTTTGCCAACATAATCCT
TCCTTTCGGATTACTCTTACCAATGTTCATCGCCTCCTTATCACTACTGTCATGCTCGCTTCTAAATATGTTGAGGATATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGTCCATTAATAATATTCCAATTTCCCCAAGAAAGCTTCGATCTGATTTGTATTCATATTCTTACAATGAGGATTATTCTAAAATCCCATTAGTCATTAGTGT
TGTTGCTTCCTTGATCGAGAGAAGTATGGCCAGAAACCATCGGATTGCCAAAAACTACATGTCGATTTCTTCGAGGGATATTGTTGTTTTCGACTGCCGTGAGGCGCCCG
ACATGTCGATTCAGGCTTATTTGGAGAGGATATTTCGTTACACTAAAGCTGCTCCTTCTGTTTACGTTGTTGCTTATGTTTATATTGATCGCTTTTGCCAACATAATCCT
TCCTTTCGGATTACTCTTACCAATGTTCATCGCCTCCTTATCACTACTGTCATGCTCGCTTCTAAATATGTTGAGGATATGTAA
Protein sequenceShow/hide protein sequence
MAKSINNIPISPRKLRSDLYSYSYNEDYSKIPLVISVVASLIERSMARNHRIAKNYMSISSRDIVVFDCREAPDMSIQAYLERIFRYTKAAPSVYVVAYVYIDRFCQHNP
SFRITLTNVHRLLITTVMLASKYVEDM