; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10010611 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010611
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationChr06:23950814..23951188
RNA-Seq ExpressionHG10010611
SyntenyHG10010611
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039766.1 Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]2.8e-5895.16Show/hide
Query:  MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS
        MDQNH+TSS+VDEGYEDLLPVMAQKLDVEVFV+ELCSGFRLLAD TKGLITAESLRRNS LLGMEGMNE+EAESMVREGDLDGDGALNEMEFCILMVRLS
Subjt:  MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS

Query:  PGMMEDAEAWLQKAIDEELSKSSC
        PGMMEDAEAWLQKAIDEELSKSSC
Subjt:  PGMMEDAEAWLQKAIDEELSKSSC

XP_004140505.1 calcium-binding protein KIC [Cucumis sativus]2.6e-5693.6Show/hide
Query:  MDQNHDTSSKV-DEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRL
        MDQNH+TS +V DEGYEDLLPVMAQKLDVEVFVAELCSGFRLLAD TKGLITAESLRRNS LLGMEGMNE+EAESMVREGDLDGDGALNEMEFCILMVRL
Subjt:  MDQNHDTSSKV-DEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRL

Query:  SPGMMEDAEAWLQKAIDEELSKSSC
        SPGMMEDAEAWLQKAIDEEL KSSC
Subjt:  SPGMMEDAEAWLQKAIDEELSKSSC

XP_023006677.1 calcium-binding protein KIC [Cucurbita maxima]1.1e-5187.1Show/hide
Query:  MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS
        MDQN  TSS+V E YEDLLP+MAQKLDVEVFVAELCSGFRLLAD +KG+ITAESLRRNS LLGMEGM + EAESMVREGDLDGDGALNEMEFCILMVRLS
Subjt:  MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS

Query:  PGMMEDAEAWLQKAIDEELSKSSC
        PGMMEDAE WLQKA+DEELSK SC
Subjt:  PGMMEDAEAWLQKAIDEELSKSSC

XP_023547367.1 calcium-binding protein KIC [Cucurbita pepo subsp. pepo]5.0e-5287.9Show/hide
Query:  MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS
        MDQN  TSS+V E YEDLLPVMAQKLDVEVFVAELCSGFRLLAD +KG+ITAESLRRNS LLGMEGM + EAESMVREGDLDGDGALNEMEFCILMVRLS
Subjt:  MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS

Query:  PGMMEDAEAWLQKAIDEELSKSSC
        PGMMEDAE WLQKA+DEELSK SC
Subjt:  PGMMEDAEAWLQKAIDEELSKSSC

XP_038875235.1 calcium-binding protein KIC [Benincasa hispida]2.2e-5593.44Show/hide
Query:  MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS
        MDQN+DTSS VDE YEDL PVMAQKLDVE+FVAELCSGFRLL+DT KGLITAESLRRNS LLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS
Subjt:  MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS

Query:  PGMMEDAEAWLQKAIDEELSKS
        PGMMEDAEAWLQKAIDEELSKS
Subjt:  PGMMEDAEAWLQKAIDEELSKS

TrEMBL top hitse value%identityAlignment
A0A061DS74 Calcium-binding EF-hand family protein3.5e-4379.49Show/hide
Query:  TSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMED
        T S     YEDLLPVMA+KLDVE FV+ELC GFRLLAD  +GLIT ESLRRNS LLGMEGM++ EAE MVREGDLDGDGALN+ EFCILMVRLSPGMMED
Subjt:  TSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMED

Query:  AEAWLQKAIDEELSKSS
        AE WLQKAID+EL KSS
Subjt:  AEAWLQKAIDEELSKSS

A0A0A0KAP2 EF-hand domain-containing protein1.2e-5693.6Show/hide
Query:  MDQNHDTSSKV-DEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRL
        MDQNH+TS +V DEGYEDLLPVMAQKLDVEVFVAELCSGFRLLAD TKGLITAESLRRNS LLGMEGMNE+EAESMVREGDLDGDGALNEMEFCILMVRL
Subjt:  MDQNHDTSSKV-DEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRL

Query:  SPGMMEDAEAWLQKAIDEELSKSSC
        SPGMMEDAEAWLQKAIDEEL KSSC
Subjt:  SPGMMEDAEAWLQKAIDEELSKSSC

A0A5A7TCH3 Calcium-binding EF-hand family protein1.3e-5895.16Show/hide
Query:  MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS
        MDQNH+TSS+VDEGYEDLLPVMAQKLDVEVFV+ELCSGFRLLAD TKGLITAESLRRNS LLGMEGMNE+EAESMVREGDLDGDGALNEMEFCILMVRLS
Subjt:  MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS

Query:  PGMMEDAEAWLQKAIDEELSKSSC
        PGMMEDAEAWLQKAIDEELSKSSC
Subjt:  PGMMEDAEAWLQKAIDEELSKSSC

A0A6J1H361 calcium-binding protein KIC7.1e-5287.1Show/hide
Query:  MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS
        MDQN  TSS+V E YEDLLPVMAQKLDVEVFVAELCSGFRLLAD +KG+ITAESLR+NS LLGMEGM + EAESMVREGDLDGDGALNEMEFCILMVRLS
Subjt:  MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS

Query:  PGMMEDAEAWLQKAIDEELSKSSC
        PGMMEDAE WLQKA+DEELSK SC
Subjt:  PGMMEDAEAWLQKAIDEELSKSSC

A0A6J1KWH6 calcium-binding protein KIC5.4e-5287.1Show/hide
Query:  MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS
        MDQN  TSS+V E YEDLLP+MAQKLDVEVFVAELCSGFRLLAD +KG+ITAESLRRNS LLGMEGM + EAESMVREGDLDGDGALNEMEFCILMVRLS
Subjt:  MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS

Query:  PGMMEDAEAWLQKAIDEELSKSSC
        PGMMEDAE WLQKA+DEELSK SC
Subjt:  PGMMEDAEAWLQKAIDEELSKSSC

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP12.5e-2246.9Show/hide
Query:  TSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRN-SVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMME
        T       + D LP MA  L  E  + ELC+GF LL D  KG+IT ESLRRN + +LG+  + + +   M++EGD D DGALN+MEFC+LM RLSP +ME
Subjt:  TSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRN-SVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMME

Query:  DAEAWLQKAIDEE
         +   + + I+EE
Subjt:  DAEAWLQKAIDEE

Q12798 Centrin-13.9e-0737.21Show/hide
Query:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS
        + D L VM QK+  +    E+   FRL  D   G I+ ++L+R +  LG E + + E + M+ E D DGDG +NE EF  +M + S
Subjt:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS

Q2TBN3 Centrin-23.0e-0736.05Show/hide
Query:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS
        + D L VM QK+  +    E+   F+L  D   G I+ ++L+R +  LG E +++ E + M+ E D DGDG +NE EF  +M + S
Subjt:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS

Q9LSQ6 Calcium-binding protein PBP19.6e-2249.52Show/hide
Query:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRN-SVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQK
        ++D  P MA KL  E  + E+C GF LL D  KG+IT ESLRRN S +LG+  + + +   M+ EGD D DGALN+MEFC+LM RLSP +ME +   + +
Subjt:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRN-SVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQK

Query:  AIDEE
         I+EE
Subjt:  AIDEE

Q9ZPX9 Calcium-binding protein KIC3.9e-3968.14Show/hide
Query:  TSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMED
        +++K++  YED+LPVMA+K+DVE FV+ELC GF LLAD  + LITAESLRRNS +LG+EGM++ +A+ MVREGDLDGDGALN+ EFC+LMVRLSP MMED
Subjt:  TSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMED

Query:  AEAWLQKAIDEEL
        AE WL+KA+ +EL
Subjt:  AEAWLQKAIDEEL

Arabidopsis top hitse value%identityAlignment
AT2G46600.1 Calcium-binding EF-hand family protein2.8e-4068.14Show/hide
Query:  TSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMED
        +++K++  YED+LPVMA+K+DVE FV+ELC GF LLAD  + LITAESLRRNS +LG+EGM++ +A+ MVREGDLDGDGALN+ EFC+LMVRLSP MMED
Subjt:  TSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMED

Query:  AEAWLQKAIDEEL
        AE WL+KA+ +EL
Subjt:  AEAWLQKAIDEEL

AT3G51920.1 calmodulin 96.9e-0739.53Show/hide
Query:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS
        ++D L +MAQ    E    EL   FR+      GLI+   L      +GM+ +   EAE MVRE DLDGDG L+  EF  +M+  S
Subjt:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLS

AT4G14640.1 calmodulin 83.1e-0731.53Show/hide
Query:  MDQN------HDTSSKVDEG------YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALN
        +DQN      HD  +++D        + + L +MA+KL       EL   F++      G I+A  L    + LG E + + E E M++E DLDGDG +N
Subjt:  MDQN------HDTSSKVDEG------YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALN

Query:  EMEFCILMVRL
          EF  +M+ +
Subjt:  EMEFCILMVRL

AT4G27280.1 Calcium-binding EF-hand family protein1.8e-2346.9Show/hide
Query:  TSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRN-SVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMME
        T       + D LP MA  L  E  + ELC+GF LL D  KG+IT ESLRRN + +LG+  + + +   M++EGD D DGALN+MEFC+LM RLSP +ME
Subjt:  TSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRN-SVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMME

Query:  DAEAWLQKAIDEE
         +   + + I+EE
Subjt:  DAEAWLQKAIDEE

AT5G54490.1 pinoid-binding protein 16.8e-2349.52Show/hide
Query:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRN-SVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQK
        ++D  P MA KL  E  + E+C GF LL D  KG+IT ESLRRN S +LG+  + + +   M+ EGD D DGALN+MEFC+LM RLSP +ME +   + +
Subjt:  YEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRN-SVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAWLQK

Query:  AIDEE
         I+EE
Subjt:  AIDEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCAAAATCATGATACCTCAAGCAAAGTAGATGAAGGATATGAAGACTTGTTGCCAGTGATGGCGCAAAAGCTCGACGTTGAGGTGTTTGTGGCTGAGCTTTGCAG
CGGTTTTCGGCTGCTTGCCGACACAACGAAAGGGTTGATAACGGCAGAGAGTTTACGGCGAAACTCGGTGCTGTTGGGAATGGAAGGGATGAACGAGCACGAAGCAGAGT
CGATGGTGAGGGAAGGAGATCTTGATGGGGATGGAGCTCTCAATGAAATGGAATTTTGTATTTTGATGGTGAGACTTAGTCCAGGAATGATGGAGGATGCTGAGGCTTGG
CTTCAGAAGGCAATTGATGAAGAGCTAAGTAAATCTTCTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACCAAAATCATGATACCTCAAGCAAAGTAGATGAAGGATATGAAGACTTGTTGCCAGTGATGGCGCAAAAGCTCGACGTTGAGGTGTTTGTGGCTGAGCTTTGCAG
CGGTTTTCGGCTGCTTGCCGACACAACGAAAGGGTTGATAACGGCAGAGAGTTTACGGCGAAACTCGGTGCTGTTGGGAATGGAAGGGATGAACGAGCACGAAGCAGAGT
CGATGGTGAGGGAAGGAGATCTTGATGGGGATGGAGCTCTCAATGAAATGGAATTTTGTATTTTGATGGTGAGACTTAGTCCAGGAATGATGGAGGATGCTGAGGCTTGG
CTTCAGAAGGCAATTGATGAAGAGCTAAGTAAATCTTCTTGTTAA
Protein sequenceShow/hide protein sequence
MDQNHDTSSKVDEGYEDLLPVMAQKLDVEVFVAELCSGFRLLADTTKGLITAESLRRNSVLLGMEGMNEHEAESMVREGDLDGDGALNEMEFCILMVRLSPGMMEDAEAW
LQKAIDEELSKSSC