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HG10010613 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010613
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAuxin-responsive family protein
Genome locationChr06:23980436..23980747
RNA-Seq ExpressionHG10010613
SyntenyHG10010613
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34225.1 auxin-responsive family protein [Cucumis melo subsp. melo]1.5e-4995.15Show/hide
Query:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC
        MGSGERSQ SFKDVPKGCLAIKVGHE+EEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALID+ETSFHHHHHH  HLYVPC
Subjt:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC

Query:  FRV
        FRV
Subjt:  FRV

KAE8646784.1 hypothetical protein Csa_005698 [Cucumis sativus]1.8e-4793.14Show/hide
Query:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC
        MGSGERSQ SFKDVPKGCLAIKVGHE+EEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALID+ETSFHH+HH   HLYVPC
Subjt:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC

Query:  FR
        FR
Subjt:  FR

XP_008459757.1 PREDICTED: auxin-responsive protein SAUR32 [Cucumis melo]9.6e-4994.17Show/hide
Query:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC
        MGSGE SQ SFKDVPKGCLAIKVGHE+EEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALID+ETSFHHHHHH  HLYVPC
Subjt:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC

Query:  FRV
        FRV
Subjt:  FRV

XP_011656853.1 auxin-responsive protein SAUR32 [Cucumis sativus]1.8e-4793.14Show/hide
Query:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC
        MGSGERSQ SFKDVPKGCLAIKVGHE+EEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALID+ETSFHH+HH   HLYVPC
Subjt:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC

Query:  FR
        FR
Subjt:  FR

XP_038876020.1 auxin-responsive protein SAUR32 [Benincasa hispida]2.1e-4891.26Show/hide
Query:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC
        MGSGERSQG+FKDVPKGCLAIKVGHE+EEKQRF+VPV+Y NHPLFIQLLKEAE+EYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHH+H  HLYVPC
Subjt:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC

Query:  FRV
        FRV
Subjt:  FRV

TrEMBL top hitse value%identityAlignment
A0A0A0KFM7 Uncharacterized protein8.8e-4893.14Show/hide
Query:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC
        MGSGERSQ SFKDVPKGCLAIKVGHE+EEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALID+ETSFHH+HH   HLYVPC
Subjt:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC

Query:  FR
        FR
Subjt:  FR

A0A1S3CBD9 auxin-responsive protein SAUR324.7e-4994.17Show/hide
Query:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC
        MGSGE SQ SFKDVPKGCLAIKVGHE+EEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALID+ETSFHHHHHH  HLYVPC
Subjt:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC

Query:  FRV
        FRV
Subjt:  FRV

A0A498KPM4 Uncharacterized protein4.8e-3866.94Show/hide
Query:  MGSGERSQGSF---------------------KDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQAL
        MGSGERSQ +F                     +DVPKGCLAIKVG + EE+QRFVVPV+YFNHPLFIQLLKEAE+EYGFDQKGTITIPCHVE+FR VQ +
Subjt:  MGSGERSQGSF---------------------KDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQAL

Query:  IDQETSFHHHHHHQYHLYVPCFRV
        ID+E S HHHHHH +H YV CFRV
Subjt:  IDQETSFHHHHHHQYHLYVPCFRV

A0A5A7TA19 Auxin-responsive family protein7.2e-5095.15Show/hide
Query:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC
        MGSGERSQ SFKDVPKGCLAIKVGHE+EEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALID+ETSFHHHHHH  HLYVPC
Subjt:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC

Query:  FRV
        FRV
Subjt:  FRV

E5GCM6 Auxin-responsive family protein7.2e-5095.15Show/hide
Query:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC
        MGSGERSQ SFKDVPKGCLAIKVGHE+EEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALID+ETSFHHHHHH  HLYVPC
Subjt:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPC

Query:  FRV
        FRV
Subjt:  FRV

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR364.7e-1451.39Show/hide
Query:  VPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETS
        VP+G LAI VG ++ +  R +VP++YFNHPLF +LL+EAE EYGF  +G ITIPC    F  V+  I   +S
Subjt:  VPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETS

P32295 Indole-3-acetic acid-induced protein ARG71.1e-1041.98Show/hide
Query:  RSQGSFK--DVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ-KGTITIPCHVEQFRYVQALIDQE
        R++ S K  D PKG LA+ VG   E  +RFV+PV + N PLF  LL +AE+E+G+D   G +TIPC  + F+++ + +  +
Subjt:  RSQGSFK--DVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ-KGTITIPCHVEQFRYVQALIDQE

P33082 Auxin-induced protein X151.8e-1043.04Show/hide
Query:  GERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ-KGTITIPCHVEQFRYVQALID
        G R   +  D PKG LA+ VG   E+ +RFV+PV Y N P F  LL +AE+E+G+D   G +TIPC  E F+ +   ++
Subjt:  GERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ-KGTITIPCHVEQFRYVQALID

Q41220 Auxin-responsive protein SAUR159.8e-1240.74Show/hide
Query:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ-KGTITIPCHVEQFRYVQALI
        +G+ +  +      P+G +A+ VG  +++K+R+VVPV Y N PLF QLL ++E+E+G+D   G +TIPCH   F  V + I
Subjt:  MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ-KGTITIPCHVEQFRYVQALI

Q9ZUZ3 Auxin-responsive protein SAUR327.9e-3868.33Show/hide
Query:  MGSGERSQGSF----------KDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFH---
        MG+GE++  SF          KDVPKGCLAIKVG + EE+QRF+VPVLYFNHPLF+QLLKEAEDEYGFDQKGTITIPCHVE+FRYVQALID E S +   
Subjt:  MGSGERSQGSF----------KDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFH---

Query:  -HHHHH----QYHLYVPCFR
         HHH H    QYH  V CFR
Subjt:  -HHHHH----QYHLYVPCFR

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family5.6e-3968.33Show/hide
Query:  MGSGERSQGSF----------KDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFH---
        MG+GE++  SF          KDVPKGCLAIKVG + EE+QRF+VPVLYFNHPLF+QLLKEAEDEYGFDQKGTITIPCHVE+FRYVQALID E S +   
Subjt:  MGSGERSQGSF----------KDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFH---

Query:  -HHHHH----QYHLYVPCFR
         HHH H    QYH  V CFR
Subjt:  -HHHHH----QYHLYVPCFR

AT3G60690.1 SAUR-like auxin-responsive protein family2.7e-1750.68Show/hide
Query:  VPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSF
        VPKG  A+ +G ++ + QR +VP++YFNHPLF +LL+EAE+E+GF Q+G ITIPC    F+ VQ  I+  + F
Subjt:  VPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSF

AT3G61900.1 SAUR-like auxin-responsive protein family3.9e-3265.35Show/hide
Query:  MGSGER----------------SQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQET
        MGSGE+                S+   KDVPKGCLAIKVG + EEKQRFVVPV YFNHPLF+QLL+EAE+EYGF+QKGTITIPCHVE FRYVQ +I++E 
Subjt:  MGSGER----------------SQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQET

Query:  S
        S
Subjt:  S

AT4G00880.1 SAUR-like auxin-responsive protein family1.8e-3268.04Show/hide
Query:  VPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETS-------FHHHHHHQYHLYVPCFRV
        VPKGCLA+KVG + EE++RFV+PV+YFNHPLF QLLKEAE+E+GF QKGTITIPCHVE+FRYVQ LID+E +         HHHHH  HL + CFRV
Subjt:  VPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETS-------FHHHHHHQYHLYVPCFRV

AT5G53590.1 SAUR-like auxin-responsive protein family1.1e-2354.74Show/hide
Query:  DVPKGCLAIKVGHENEEK--QRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHH---------HHHHQYHL
        DVPKGC+AI VGHE++E+   RFVVP+++ +HPLF+ LLKEAE EYGF   G ITIPC V++F++VQ +ID+ET   H         H+HH  HL
Subjt:  DVPKGCLAIKVGHENEEK--QRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHH---------HHHHQYHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGTGGGGAGAGAAGCCAAGGGAGTTTCAAGGATGTTCCAAAGGGTTGTTTGGCTATCAAAGTTGGGCATGAAAATGAAGAAAAACAAAGATTTGTAGTGCCTGT
CTTGTATTTCAATCATCCTTTGTTTATTCAGCTGCTTAAGGAAGCTGAAGATGAATATGGCTTTGATCAAAAGGGAACCATCACAATTCCTTGTCATGTGGAGCAATTTA
GGTATGTTCAAGCCTTGATTGATCAAGAAACCTCATTTCATCATCACCATCACCACCAGTACCATCTCTATGTTCCTTGTTTTAGAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGTGGGGAGAGAAGCCAAGGGAGTTTCAAGGATGTTCCAAAGGGTTGTTTGGCTATCAAAGTTGGGCATGAAAATGAAGAAAAACAAAGATTTGTAGTGCCTGT
CTTGTATTTCAATCATCCTTTGTTTATTCAGCTGCTTAAGGAAGCTGAAGATGAATATGGCTTTGATCAAAAGGGAACCATCACAATTCCTTGTCATGTGGAGCAATTTA
GGTATGTTCAAGCCTTGATTGATCAAGAAACCTCATTTCATCATCACCATCACCACCAGTACCATCTCTATGTTCCTTGTTTTAGAGTTTGA
Protein sequenceShow/hide protein sequence
MGSGERSQGSFKDVPKGCLAIKVGHENEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQKGTITIPCHVEQFRYVQALIDQETSFHHHHHHQYHLYVPCFRV