CuGenDBv2

Gene ID	HG10010716
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Coiled-coil domain-containing protein SCD2
Genome location	Chr06:25151457..25152822
RNA-Seq Expression	HG10010716
Synteny	HG10010716
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008459907.1 PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo]

4.4e-81

67.38

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Query:  MERFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHR
        ME+FFSV+QIH  C+SSHSI LVSGPPS                                                     YLEDD+GIKKYFSAFHLH 
Subjt:  MERFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHR

Query:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSIN
        TLPVAVVIDDFGDFFEERRCQ KYANPRGRD+AMVRTLALCH+AVSLA   +Q RPCQLVLSDTHHGESPRLIFIY+RWVPTIFTI+GDG+GWFILRSIN
Subjt:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSIN

Query:  NCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE
        NCGNDCCLRT+ AKYSIALQFLSLEEIS+DS E
Subjt:  NCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE

XP_022148906.1 uncharacterized protein LOC111017459 [Momordica charantia]

2.6e-81

67.81

Show/hide

Query:  MERFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHR
        MERFFSVRQIH+HCDSSHSIML+SGPPS                                                     YLEDDEGIKKYFSAFHLH 
Subjt:  MERFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHR

Query:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSIN
        TLP AVVIDDFGDFF +RRCQEKYANPRGRDLAMVRTLALCH+AVS+A   ++SRPC+LVLSDTHHGESPRLIFIY+RWVPTIFTI+GDGSGWF +RSIN
Subjt:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSIN

Query:  NCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE
        NCGNDCCLRTR AKYSIALQFLSL+EIS+DS E
Subjt:  NCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE

XP_022959968.1 uncharacterized protein LOC111460863 isoform X1 [Cucurbita moschata]

6.8e-82

68.83

Show/hide

Query:  RFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHRTL
        RFFSVRQI   CDSSHSIMLVSGPPS                                                     YLEDDEGI KYFSAFHLHRTL
Subjt:  RFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHRTL

Query:  PVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSINNC
        PVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCH+A+SLA   +Q RPCQLVLSDTHHGESPRLIFIY+RWVPTIFTI+GDGSGWFILRSINNC
Subjt:  PVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSINNC

Query:  GNDCCLRTRSAKYSIALQFLSLEEISDDSSE
        GN+CCLRT+SAKYSIALQFLSLEE+S+D +E
Subjt:  GNDCCLRTRSAKYSIALQFLSLEEISDDSSE

XP_023514984.1 uncharacterized protein LOC111779141 [Cucurbita pepo subsp. pepo]

1.4e-82

69.1

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Query:  MERFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHR
        MERFFSVRQI   CDSSHSIMLVSGPPS                                                     YLEDDEGI KYFSAFHLHR
Subjt:  MERFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHR

Query:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSIN
        TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCH+A+SLAK      PCQLVLSDTHHGESPRLIFIY+RWVPTIFTI+GDGSGWFILRSIN
Subjt:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSIN

Query:  NCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE
        NCGNDCCLRT+SAKYSIALQFLSLEE+S+D +E
Subjt:  NCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE

XP_038906786.1 uncharacterized protein LOC120092706 isoform X1 [Benincasa hispida]

1.6e-83

69.96

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Query:  MERFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHR
        ME+FFSVRQIH HCDSSHSIMLVSGPPS                                                     YLEDDEGIKKYFSAFHLHR
Subjt:  MERFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHR

Query:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSIN
        TLPVAVVIDDFGDFFEERRCQ+KYANPRGRDLAMVRTLALCH+AVSLA   + SRPCQLVLSD +HGESPRLIFIY+RWVPTIFTI GDG GWF LRSIN
Subjt:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSIN

Query:  NCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE
        NCGNDCCLR RSAKYSIALQFLSLEEIS+DSSE
Subjt:  NCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K9H1 Uncharacterized protein

2.8e-81

67.81

Show/hide

Query:  MERFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHR
        ME+FFSV+QIH HC+SSHSI LVSGPPS                                                     YLEDD+GIKKYFSAFHLH 
Subjt:  MERFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHR

Query:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSIN
        TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALC +AVSLA   +Q RPCQLVLSDTHHGESPRLIFIY+RWVPTIFTI+GDG+GWFILRSIN
Subjt:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSIN

Query:  NCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE
        NCG DCCLRT+ AKYSIALQFLSLEEIS+DS E
Subjt:  NCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE

A0A1S3CAT0 uncharacterized protein LOC103498887

2.1e-81

67.38

Show/hide

Query:  MERFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHR
        ME+FFSV+QIH  C+SSHSI LVSGPPS                                                     YLEDD+GIKKYFSAFHLH 
Subjt:  MERFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHR

Query:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSIN
        TLPVAVVIDDFGDFFEERRCQ KYANPRGRD+AMVRTLALCH+AVSLA   +Q RPCQLVLSDTHHGESPRLIFIY+RWVPTIFTI+GDG+GWFILRSIN
Subjt:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSIN

Query:  NCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE
        NCGNDCCLRT+ AKYSIALQFLSLEEIS+DS E
Subjt:  NCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE

A0A6J1D5D7 uncharacterized protein LOC111017459

1.3e-81

67.81

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Query:  MERFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHR
        MERFFSVRQIH+HCDSSHSIML+SGPPS                                                     YLEDDEGIKKYFSAFHLH 
Subjt:  MERFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHR

Query:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSIN
        TLP AVVIDDFGDFF +RRCQEKYANPRGRDLAMVRTLALCH+AVS+A   ++SRPC+LVLSDTHHGESPRLIFIY+RWVPTIFTI+GDGSGWF +RSIN
Subjt:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSIN

Query:  NCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE
        NCGNDCCLRTR AKYSIALQFLSL+EIS+DS E
Subjt:  NCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE

A0A6J1H6C8 uncharacterized protein LOC111460863 isoform X1

3.3e-82

68.83

Show/hide

Query:  RFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHRTL
        RFFSVRQI   CDSSHSIMLVSGPPS                                                     YLEDDEGI KYFSAFHLHRTL
Subjt:  RFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHRTL

Query:  PVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSINNC
        PVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCH+A+SLA   +Q RPCQLVLSDTHHGESPRLIFIY+RWVPTIFTI+GDGSGWFILRSINNC
Subjt:  PVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSINNC

Query:  GNDCCLRTRSAKYSIALQFLSLEEISDDSSE
        GN+CCLRT+SAKYSIALQFLSLEE+S+D +E
Subjt:  GNDCCLRTRSAKYSIALQFLSLEEISDDSSE

E5GB61 Uncharacterized protein

2.1e-81

67.38

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Query:  MERFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHR
        ME+FFSV+QIH  C+SSHSI LVSGPPS                                                     YLEDD+GIKKYFSAFHLH 
Subjt:  MERFFSVRQIHAHCDSSHSIMLVSGPPSW----------------------------------------------------YLEDDEGIKKYFSAFHLHR

Query:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSIN
        TLPVAVVIDDFGDFFEERRCQ KYANPRGRD+AMVRTLALCH+AVSLA   +Q RPCQLVLSDTHHGESPRLIFIY+RWVPTIFTI+GDG+GWFILRSIN
Subjt:  TLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSIN

Query:  NCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE
        NCGNDCCLRT+ AKYSIALQFLSLEEIS+DS E
Subjt:  NCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G23255.1 unknown protein

1.5e-42

57.89

Show/hide

Query:  YLEDDEGIKKYFSAFHLHRT--LPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRW
        Y++DDEGI+KYF+AFHLH    LP AV+IDDFGD+F +        N R RD+AMVRTLALCH+A+    V ++   C+LVLS+T+HG+SPR +FIY+RW
Subjt:  YLEDDEGIKKYFSAFHLHRT--LPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRW

Query:  VPTIFTIKGDGSGWFILRSINNCGNDCCLRTRSAKYSIALQFLSLEEISDDS
        +P IFTIKG G G F+L S     ND     RSAKYSIALQ+L LE+I DDS
Subjt:  VPTIFTIKGDGSGWFILRSINNCGNDCCLRTRSAKYSIALQFLSLEEISDDS

AT3G23255.2 unknown protein

2.5e-42

57.89

Show/hide

Query:  YLEDDEGIKKYFSAFHLHRT--LPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRW
        Y++DDEGI+KYF+AFHLH    LP AV+IDDFGD+F +        N R RD+AMVRTLALCH+A+  A   ++   C+LVLS+T+HG+SPR +FIY+RW
Subjt:  YLEDDEGIKKYFSAFHLHRT--LPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLSDTHHGESPRLIFIYRRW

Query:  VPTIFTIKGDGSGWFILRSINNCGNDCCLRTRSAKYSIALQFLSLEEISDDS
        +P IFTIKG G G F+L S     ND     RSAKYSIALQ+L LE+I DDS
Subjt:  VPTIFTIKGDGSGWFILRSINNCGNDCCLRTRSAKYSIALQFLSLEEISDDS

Sequences

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CDS sequence

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ATGGAAAGGTTTTTCTCAGTGCGGCAAATCCACGCTCACTGCGACTCTTCCCACTCAATCATGCTTGTTTCCGGGCCTCCCTCCTGGTATTTGGAGGATGACGAAGGAAT
TAAGAAGTACTTCTCTGCGTTTCACCTGCATCGTACACTTCCTGTGGCGGTTGTTATTGATGATTTTGGGGATTTTTTCGAGGAAAGGCGATGTCAAGAAAAATATGCCA
ATCCTCGCGGAAGAGACTTAGCAATGGTTAGAACATTAGCTCTTTGTCACGATGCCGTGAGCCTAGCAAAAGTTTTCAGTCAAAGTAGGCCTTGCCAGCTTGTGTTGTCT
GATACACACCATGGAGAGTCCCCAAGGTTGATATTCATATATAGGAGATGGGTTCCAACCATTTTCACCATAAAAGGAGATGGGTCTGGATGGTTCATCCTGAGAAGTAT
TAACAATTGTGGAAATGATTGTTGTTTGAGGACTAGAAGTGCAAAGTACTCGATTGCTCTTCAATTCCTGAGTTTGGAAGAAATTTCTGATGACAGTAGCGAATAG

mRNA sequence

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Protein sequence

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MERFFSVRQIHAHCDSSHSIMLVSGPPSWYLEDDEGIKKYFSAFHLHRTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCHDAVSLAKVFSQSRPCQLVLS
DTHHGESPRLIFIYRRWVPTIFTIKGDGSGWFILRSINNCGNDCCLRTRSAKYSIALQFLSLEEISDDSSE

HG10010716 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome