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HG10010850 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010850
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr06:26475236..26475679
RNA-Seq ExpressionHG10010850
SyntenyHG10010850
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040002.1 hypothetical protein E6C27_scaffold122G002850 [Cucumis melo var. makuwa]3.1e-3269.17Show/hide
Query:  LNSKHRNFVLQLIEIIRVVKSSRASVFIASNTIIFILFSEKFKRLSSKGEAIEELVESCKD-CNRHNN-ELNGHE-ICIDDSYEEDCEEGLQDDIEKKAQ
        ++SKHRNF+++LIEII VVKSSRAS+F+ASNTI+ ILF EK KRLSSK     E    CKD C+RH++ ELN  E IC++DS +E CEEG+QDD+EKKAQ
Subjt:  LNSKHRNFVLQLIEIIRVVKSSRASVFIASNTIIFILFSEKFKRLSSKGEAIEELVESCKD-CNRHNN-ELNGHE-ICIDDSYEEDCEEGLQDDIEKKAQ

Query:  EFIDMMNAFWREELIYDRFL
        EFIDMMNAFWREELI+DRFL
Subjt:  EFIDMMNAFWREELIYDRFL

KAE8646698.1 hypothetical protein Csa_005140 [Cucumis sativus]1.6e-3362.67Show/hide
Query:  MKKLHVFFLCIIIALSFFLFFFFFYFWPPSLNSKHRNFVLQLIEIIRVVKSSRASVFIASNTIIFILFSEKFKRLSSKGEAIEELVESCKDCNRHNNELN
        MKKL V FLCIII LSFFLFF         ++  HRN V Q +EI+ VVKSSRAS+F+ASNTII ILF +K K+LSSK E  E   + C  C+  ++ELN
Subjt:  MKKLHVFFLCIIIALSFFLFFFFFYFWPPSLNSKHRNFVLQLIEIIRVVKSSRASVFIASNTIIFILFSEKFKRLSSKGEAIEELVESCKDCNRHNNELN

Query:  GHE-ICIDDSYEED-CEEG-LQDDIEKKAQEFIDMMNAFWREELIYDRFL
         +E IC++DS +ED CEEG +QDD+EKKAQEFIDMMNAFWREELI+DRFL
Subjt:  GHE-ICIDDSYEED-CEEG-LQDDIEKKAQEFIDMMNAFWREELIYDRFL

KAG6593708.1 hypothetical protein SDJN03_13184, partial [Cucurbita argyrosperma subsp. sororia]3.8e-1457.14Show/hide
Query:  IFILFSEKFKRLSSKGEAIEELVESCKDCNRHNNELNGHEICIDDSYEEDCEEGLQDDIEKKAQEFIDMMNAFWREELIYDRFL
        +FILF EKFK+  S+ + I E VES +D +R ++EL  H I + DS +ED +E  QDD EKKAQEFI+MM +FWREEL+ DRFL
Subjt:  IFILFSEKFKRLSSKGEAIEELVESCKDCNRHNNELNGHEICIDDSYEEDCEEGLQDDIEKKAQEFIDMMNAFWREELIYDRFL

TrEMBL top hitse value%identityAlignment
A0A0A0K9S4 Uncharacterized protein5.0e-2865.52Show/hide
Query:  HRNFVLQLIEIIRVVKSSRASVFIASNTIIFILFSEKFKRLSSKGEAIEELVESCKDCNRHNNELNGHE-ICIDDSYEED-CEEG-LQDDIEKKAQEFID
        HRN V Q +EI+ VVKSSRAS+F+ASNTII ILF +K K+LSSK E  E   + C  C+  ++ELN +E IC++DS +ED CEEG +QDD+EKKAQEFID
Subjt:  HRNFVLQLIEIIRVVKSSRASVFIASNTIIFILFSEKFKRLSSKGEAIEELVESCKDCNRHNNELNGHE-ICIDDSYEED-CEEG-LQDDIEKKAQEFID

Query:  MMNAFWREELIYDRFL
        MMNAFWREELI+DRFL
Subjt:  MMNAFWREELIYDRFL

A0A5A7T9A6 Uncharacterized protein1.5e-3269.17Show/hide
Query:  LNSKHRNFVLQLIEIIRVVKSSRASVFIASNTIIFILFSEKFKRLSSKGEAIEELVESCKD-CNRHNN-ELNGHE-ICIDDSYEEDCEEGLQDDIEKKAQ
        ++SKHRNF+++LIEII VVKSSRAS+F+ASNTI+ ILF EK KRLSSK     E    CKD C+RH++ ELN  E IC++DS +E CEEG+QDD+EKKAQ
Subjt:  LNSKHRNFVLQLIEIIRVVKSSRASVFIASNTIIFILFSEKFKRLSSKGEAIEELVESCKD-CNRHNN-ELNGHE-ICIDDSYEEDCEEGLQDDIEKKAQ

Query:  EFIDMMNAFWREELIYDRFL
        EFIDMMNAFWREELI+DRFL
Subjt:  EFIDMMNAFWREELIYDRFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAACTTCACGTATTTTTTCTTTGCATCATTATTGCATTGAGTTTCTTCCTTTTCTTCTTCTTCTTCTATTTCTGGCCCCCCTCGCTAAATTCCAAGCATCGAAA
CTTCGTCCTTCAATTAATCGAAATCATTCGGGTAGTGAAATCGAGTCGTGCGTCGGTGTTCATTGCATCTAACACTATCATTTTCATCCTCTTCAGCGAGAAGTTTAAGC
GATTATCTAGCAAAGGAGAAGCGATAGAAGAACTGGTAGAAAGCTGTAAGGATTGTAATAGACATAATAATGAGTTGAATGGTCATGAAATTTGTATTGATGATAGTTAT
GAGGAAGATTGTGAAGAAGGGCTCCAAGATGATATAGAAAAGAAGGCTCAAGAGTTTATTGACATGATGAATGCTTTTTGGAGGGAAGAATTGATTTATGATAGGTTTCT
TTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAACTTCACGTATTTTTTCTTTGCATCATTATTGCATTGAGTTTCTTCCTTTTCTTCTTCTTCTTCTATTTCTGGCCCCCCTCGCTAAATTCCAAGCATCGAAA
CTTCGTCCTTCAATTAATCGAAATCATTCGGGTAGTGAAATCGAGTCGTGCGTCGGTGTTCATTGCATCTAACACTATCATTTTCATCCTCTTCAGCGAGAAGTTTAAGC
GATTATCTAGCAAAGGAGAAGCGATAGAAGAACTGGTAGAAAGCTGTAAGGATTGTAATAGACATAATAATGAGTTGAATGGTCATGAAATTTGTATTGATGATAGTTAT
GAGGAAGATTGTGAAGAAGGGCTCCAAGATGATATAGAAAAGAAGGCTCAAGAGTTTATTGACATGATGAATGCTTTTTGGAGGGAAGAATTGATTTATGATAGGTTTCT
TTAG
Protein sequenceShow/hide protein sequence
MKKLHVFFLCIIIALSFFLFFFFFYFWPPSLNSKHRNFVLQLIEIIRVVKSSRASVFIASNTIIFILFSEKFKRLSSKGEAIEELVESCKDCNRHNNELNGHEICIDDSY
EEDCEEGLQDDIEKKAQEFIDMMNAFWREELIYDRFL