; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10010873 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010873
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUbiquitin-related modifier 1 homolog
Genome locationChr06:26682935..26683552
RNA-Seq ExpressionHG10010873
SyntenyHG10010873
Gene Ontology termsGO:0002098 - tRNA wobble uridine modification (biological process)
GO:0032447 - protein urmylation (biological process)
GO:0034227 - tRNA thio-modification (biological process)
GO:0005829 - cytosol (cellular component)
InterPro domainsIPR012675 - Beta-grasp domain superfamily
IPR015221 - Ubiquitin-related modifier 1
IPR016155 - Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040023.1 ubiquitin-related modifier 1-like protein 2 [Cucumis melo var. makuwa]1.0e-5096.12Show/hide
Query:  MDMTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
        MDMT+ LDFKCSGGLELLC+SVKIHNVSIDPENGVGKLIMKDLLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
Subjt:  MDMTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

KAG7026033.1 Ubiquitin-related modifier 1-like 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-4994.17Show/hide
Query:  MDMTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
        +DMTVIL FKCSGGLELLCDSVKIHNVSI+PENG GKL+MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
Subjt:  MDMTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

XP_022145475.1 ubiquitin-related modifier 1 homolog 2 isoform X1 [Momordica charantia]6.7e-5094.17Show/hide
Query:  MDMTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
        MDMT++L FKCSGGLELLC+SVKIHNVSIDPENG GKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTL
Subjt:  MDMTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

XP_038876423.1 ubiquitin-related modifier 1 homolog 2 isoform X1 [Benincasa hispida]1.0e-4593.07Show/hide
Query:  MTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        M + L+F   GGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
Subjt:  MTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

XP_038876424.1 ubiquitin-related modifier 1 homolog 2 isoform X2 [Benincasa hispida]5.5e-5299.03Show/hide
Query:  MDMTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
        MDMTVIL FKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
Subjt:  MDMTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

TrEMBL top hitse value%identityAlignment
A0A0A0KCT7 Ubiquitin-related modifier 1 homolog2.9e-5196.12Show/hide
Query:  MDMTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
        MDMT+ILDFKCSGGLELLC+SVKIHNVSIDPENGVGK IMKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
Subjt:  MDMTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

A0A1S3CCC7 Ubiquitin-related modifier 1 homolog7.0e-4591.09Show/hide
Query:  MTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        M + L+F   GGLELLC+SVKIHNVSIDPENGVGKLIMKDLLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
Subjt:  MTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

A0A5D3DLM7 Ubiquitin-related modifier 1 homolog5.0e-5196.12Show/hide
Query:  MDMTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
        MDMT+ LDFKCSGGLELLC+SVKIHNVSIDPENGVGKLIMKDLLSWVR NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
Subjt:  MDMTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

A0A6J1CUK8 Ubiquitin-related modifier 1 homolog3.2e-5094.17Show/hide
Query:  MDMTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
        MDMT++L FKCSGGLELLC+SVKIHNVSIDPENG GKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTL
Subjt:  MDMTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

A0A6J1KGQ8 Ubiquitin-related modifier 1 homolog7.0e-4590.1Show/hide
Query:  MTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        M + L+F   GGLELLCDSVKIHNVSI+PENGVGKL+MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
Subjt:  MTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

SwissProt top hitse value%identityAlignment
A0MDQ1 Ubiquitin-related modifier 1 homolog 11.6e-3876.7Show/hide
Query:  MTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGK--LIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
        M + L+F   GGLELLCDS KIH V++D  NG       MK LLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT +E+KDVVVFISTL
Subjt:  MTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGK--LIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

B3H7G2 Ubiquitin-related modifier 1 homolog 22.2e-4081.19Show/hide
Query:  MTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        M   L+F   GGLELLCDSVKIH V+I+  N    L MKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLE+KDV+VFISTLHG
Subjt:  MTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G

B6SXH2 Ubiquitin-related modifier 1 homolog1.7e-3268.69Show/hide
Query:  LDFKCSGGLELLCD-SVKIHNVSI-DPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        L  +  GGLELL + S K+H V +  P++G GK+ MK LLSWV+ NLIKERPEMF+K D+VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Subjt:  LDFKCSGGLELLCD-SVKIHNVSI-DPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

Q0D6M1 Ubiquitin-related modifier 1 homolog6.3e-3569.39Show/hide
Query:  LDFKCSGGLELLCD-SVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        L  +  GGLELL + S K+H V + P +G GK++MK LL+WV++NLIKERPEMF+KGD+VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Subjt:  LDFKCSGGLELLCD-SVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

Q7GBC8 Ubiquitin-related modifier 1 homolog6.3e-3569.39Show/hide
Query:  LDFKCSGGLELLCD-SVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        L  +  GGLELL + S K+H V + P +G GK++MK LL+WV++NLIKERPEMF+KGD+VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Subjt:  LDFKCSGGLELLCD-SVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

Arabidopsis top hitse value%identityAlignment
AT2G45695.1 Ubiquitin related modifier 11.1e-3976.7Show/hide
Query:  MTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGK--LIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL
        M + L+F   GGLELLCDS KIH V++D  NG       MK LLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT +E+KDVVVFISTL
Subjt:  MTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGK--LIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTL

Query:  HGG
        HGG
Subjt:  HGG

AT3G61113.1 Ubiquitin related modifier 11.6e-4181.19Show/hide
Query:  MTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG
        M   L+F   GGLELLCDSVKIH V+I+  N    L MKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLE+KDV+VFISTLHG
Subjt:  MTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHG

Query:  G
        G
Subjt:  G


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATGACAGTAATATTAGACTTTAAATGCAGTGGGGGATTGGAGTTACTATGTGACTCTGTGAAGATCCATAATGTCAGCATTGATCCTGAAAATGGAGTGGGAAA
GTTAATTATGAAAGATTTGCTGTCTTGGGTCCGTACTAACCTGATCAAGGAGCGGCCAGAAATGTTTATGAAAGGCGACACTGTAAGACCTGGTGTTCTGGTGCTTGTAA
ATGATTGTGATTGGGAGCTTAGTGGGCAGCTTGACACAACATTGGAAGAGAAAGACGTGGTAGTGTTCATATCCACCTTGCATGGAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACATGACAGTAATATTAGACTTTAAATGCAGTGGGGGATTGGAGTTACTATGTGACTCTGTGAAGATCCATAATGTCAGCATTGATCCTGAAAATGGAGTGGGAAA
GTTAATTATGAAAGATTTGCTGTCTTGGGTCCGTACTAACCTGATCAAGGAGCGGCCAGAAATGTTTATGAAAGGCGACACTGTAAGACCTGGTGTTCTGGTGCTTGTAA
ATGATTGTGATTGGGAGCTTAGTGGGCAGCTTGACACAACATTGGAAGAGAAAGACGTGGTAGTGTTCATATCCACCTTGCATGGAGGCTAG
Protein sequenceShow/hide protein sequence
MDMTVILDFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG