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HG10010911 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010911
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr01:260038..260424
RNA-Seq ExpressionHG10010911
SyntenyHG10010911
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006485824.1 uncharacterized protein LOC102613298 [Citrus sinensis]2.0e-1141.07Show/hide
Query:  MEPEDLIEDWKKLQL-SEEEKEIKVGRDPSLITQIHGQ--LDHCLVGKLLTTRTISPVIIRNTFANAWITTLGFSVESLGKNLFLFKFDARRDKELVLWL
        M+ E+LI   + + L SEE+  I  GR+     ++ G+  + HCLVGK+L TR++    +R     AW TT    VESLG N+FLFKF ++ +K+ +L+ 
Subjt:  MEPEDLIEDWKKLQL-SEEEKEIKVGRDPSLITQIHGQ--LDHCLVGKLLTTRTISPVIIRNTFANAWITTLGFSVESLGKNLFLFKFDARRDKELVLWL

Query:  GPWIFDNSLLAL
        GPW FD SL+ +
Subjt:  GPWIFDNSLLAL

XP_015388532.1 uncharacterized protein LOC107178176 [Citrus sinensis]3.4e-1140.18Show/hide
Query:  MEPEDLIEDWKKLQL-SEEEKEIKVGRDPSLITQIHGQ--LDHCLVGKLLTTRTISPVIIRNTFANAWITTLGFSVESLGKNLFLFKFDARRDKELVLWL
        M+ E+LI   + + L SEE+  I  GR+     ++ G+  + HCLVGK+L TR++    +R     AW TT    VESLG N+F+FKF ++ +K+ +L+ 
Subjt:  MEPEDLIEDWKKLQL-SEEEKEIKVGRDPSLITQIHGQ--LDHCLVGKLLTTRTISPVIIRNTFANAWITTLGFSVESLGKNLFLFKFDARRDKELVLWL

Query:  GPWIFDNSLLAL
        GPW FD SL+ +
Subjt:  GPWIFDNSLLAL

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.2e-1136.94Show/hide
Query:  MEPEDLIEDWKKLQLSEEEKEIKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAW-ITTLGFSVESLGKNLFLFKFDARRDKELVLWLGP
        M   +L+E+WK  +L+ EE +I V  D S +      L+  L+ KLL+ R+IS  +++NT   AW +    FSV+ +G N+FLF F+   D+  +L +GP
Subjt:  MEPEDLIEDWKKLQLSEEEKEIKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAW-ITTLGFSVESLGKNLFLFKFDARRDKELVLWLGP

Query:  WIFDNSLLALE
        W FD +L+ ++
Subjt:  WIFDNSLLALE

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]2.7e-1639.06Show/hide
Query:  MEPEDLIEDWKKLQLSEEEKEIKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAWITTLGFSVESLGKNLFLFKFDARRDKELVLWLGPW
        M+ E+L+ DW+K +L+ EE EI +  D   +      L + LVGKLL  R IS  ++      AW      +VES+GKNLFLF F    D   V+  GPW
Subjt:  MEPEDLIEDWKKLQLSEEEKEIKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAWITTLGFSVESLGKNLFLFKFDARRDKELVLWLGPW

Query:  IFDNSLLALEVSRDNKRLSQLSFDKAAF
         FD +L+ L+    +K +S+L F++ AF
Subjt:  IFDNSLLALEVSRDNKRLSQLSFDKAAF

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]6.9e-1236.89Show/hide
Query:  DLIEDWKKLQLSEEEKEIKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAW-ITTLGFSVESLGKNLFLFKFDARRDKELVLWLGPWIFD
        DL+E+WK  +L+ EE+E  +  D S       +L+  LVGKL   R I+  +++NT   AW +    F V+SLG NLFLF F    D+  +   GPW FD
Subjt:  DLIEDWKKLQLSEEEKEIKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAW-ITTLGFSVESLGKNLFLFKFDARRDKELVLWLGPWIFD

Query:  NSLLALEVSRDNKRLSQLSFDK
         +L+ +         S+L F K
Subjt:  NSLLALEVSRDNKRLSQLSFDK

TrEMBL top hitse value%identityAlignment
A0A2N9F689 Uncharacterized protein1.5e-1239.67Show/hide
Query:  KKLQLSEEEKE-IKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAW--ITTLGFSVESLGKNLFLFKFDARRDKELVLWLGPWIFDNSLL
        KKL L+E E E IK+  +    +Q  G+   CL+ KLLT R  +   +++T  N W  +TT G     +G NLFLF+F  + DKE VL   PW FD  LL
Subjt:  KKLQLSEEEKE-IKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAW--ITTLGFSVESLGKNLFLFKFDARRDKELVLWLGPWIFDNSLL

Query:  ALEVSRDNKRLSQLSFDKAAF
         L+    + +L+ +S D+A F
Subjt:  ALEVSRDNKRLSQLSFDKAAF

A0A2N9FJK9 CCHC-type domain-containing protein3.3e-1233.33Show/hide
Query:  EDLIEDWKKLQLSEEEKE-IKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAWITTLGFSVESLGKNLFLFKFDARRDKELVLWLGPWIF
        ++L+EDW++  L+E+E     +  +    +++ G   HCL+GKLLT +  +   ++ T    W    G   + +G+NLFLF+F    D + VL   PW+F
Subjt:  EDLIEDWKKLQLSEEEKE-IKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAWITTLGFSVESLGKNLFLFKFDARRDKELVLWLGPWIF

Query:  DNSLLALEVSRDNKRLSQLSFDKAAF
        DN+LL L V   +   +Q+SF+   F
Subjt:  DNSLLALEVSRDNKRLSQLSFDKAAF

A0A6J1BSZ1 uncharacterized protein LOC1110054815.7e-1236.94Show/hide
Query:  MEPEDLIEDWKKLQLSEEEKEIKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAW-ITTLGFSVESLGKNLFLFKFDARRDKELVLWLGP
        M   +L+E+WK  +L+ EE +I V  D S +      L+  L+ KLL+ R+IS  +++NT   AW +    FSV+ +G N+FLF F+   D+  +L +GP
Subjt:  MEPEDLIEDWKKLQLSEEEKEIKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAW-ITTLGFSVESLGKNLFLFKFDARRDKELVLWLGP

Query:  WIFDNSLLALE
        W FD +L+ ++
Subjt:  WIFDNSLLALE

A0A6J1DU55 uncharacterized protein LOC1110231351.3e-1639.06Show/hide
Query:  MEPEDLIEDWKKLQLSEEEKEIKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAWITTLGFSVESLGKNLFLFKFDARRDKELVLWLGPW
        M+ E+L+ DW+K +L+ EE EI +  D   +      L + LVGKLL  R IS  ++      AW      +VES+GKNLFLF F    D   V+  GPW
Subjt:  MEPEDLIEDWKKLQLSEEEKEIKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAWITTLGFSVESLGKNLFLFKFDARRDKELVLWLGPW

Query:  IFDNSLLALEVSRDNKRLSQLSFDKAAF
         FD +L+ L+    +K +S+L F++ AF
Subjt:  IFDNSLLALEVSRDNKRLSQLSFDKAAF

A0A6J1DX30 uncharacterized protein LOC1110248743.3e-1236.89Show/hide
Query:  DLIEDWKKLQLSEEEKEIKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAW-ITTLGFSVESLGKNLFLFKFDARRDKELVLWLGPWIFD
        DL+E+WK  +L+ EE+E  +  D S       +L+  LVGKL   R I+  +++NT   AW +    F V+SLG NLFLF F    D+  +   GPW FD
Subjt:  DLIEDWKKLQLSEEEKEIKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAW-ITTLGFSVESLGKNLFLFKFDARRDKELVLWLGPWIFD

Query:  NSLLALEVSRDNKRLSQLSFDK
         +L+ +         S+L F K
Subjt:  NSLLALEVSRDNKRLSQLSFDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCAGAGGATCTAATAGAAGACTGGAAGAAATTACAGCTTTCGGAAGAGGAAAAGGAAATAAAAGTTGGTAGAGATCCATCGCTAATTACTCAAATTCACGGTCA
ACTAGACCATTGCCTGGTGGGGAAGTTATTAACCACTCGAACTATTTCTCCTGTGATCATAAGGAATACCTTCGCAAATGCTTGGATAACAACTTTGGGTTTTAGCGTGG
AAAGTCTGGGAAAAAATCTTTTTCTTTTCAAGTTTGATGCCCGCAGGGATAAAGAGTTGGTCTTATGGCTGGGTCCTTGGATCTTTGATAATTCTTTACTAGCTTTAGAA
GTCTCTCGAGACAATAAAAGATTATCCCAACTTTCCTTTGATAAAGCTGCTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACCAGAGGATCTAATAGAAGACTGGAAGAAATTACAGCTTTCGGAAGAGGAAAAGGAAATAAAAGTTGGTAGAGATCCATCGCTAATTACTCAAATTCACGGTCA
ACTAGACCATTGCCTGGTGGGGAAGTTATTAACCACTCGAACTATTTCTCCTGTGATCATAAGGAATACCTTCGCAAATGCTTGGATAACAACTTTGGGTTTTAGCGTGG
AAAGTCTGGGAAAAAATCTTTTTCTTTTCAAGTTTGATGCCCGCAGGGATAAAGAGTTGGTCTTATGGCTGGGTCCTTGGATCTTTGATAATTCTTTACTAGCTTTAGAA
GTCTCTCGAGACAATAAAAGATTATCCCAACTTTCCTTTGATAAAGCTGCTTTTTAG
Protein sequenceShow/hide protein sequence
MEPEDLIEDWKKLQLSEEEKEIKVGRDPSLITQIHGQLDHCLVGKLLTTRTISPVIIRNTFANAWITTLGFSVESLGKNLFLFKFDARRDKELVLWLGPWIFDNSLLALE
VSRDNKRLSQLSFDKAAF