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HG10010934 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010934
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description60S ribosomal protein L37a
Genome locationChr01:591584..595188
RNA-Seq ExpressionHG10010934
SyntenyHG10010934
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009536 - plastid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002674 - Ribosomal protein L37ae
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONM18155.1 60S ribosomal protein L37a-2 [Zea mays]4.6e-1788.89Show/hide
Query:  ALLGNMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        ALL   +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  ALLGNMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
ONM18159.1 60S ribosomal protein L37a-2 [Zea mays]4.6e-1788.89Show/hide
Query:  ALLGNMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        ALL   +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  ALLGNMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
RXI00911.1 hypothetical protein DVH24_001145 [Malus domestica]6.0e-17100Show/hide
Query:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
RYQ87783.1 hypothetical protein Ahy_B09g095323 [Arachis hypogaea]6.0e-17100Show/hide
Query:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
RZC86542.1 hypothetical protein C5167_029893 [Papaver somniferum]4.6e-1796Show/hide
Query:  NMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        + YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  NMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
TrEMBL top hitse value%identityAlignment
A0A0V0WQ09 60S ribosomal protein L37a2.9e-17100Show/hide
Query:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
A0A1D6ECX6 60S ribosomal protein L37a-22.2e-1788.89Show/hide
Query:  ALLGNMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        ALL   +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  ALLGNMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
A0A1D6ECX8 60S ribosomal protein L37a-22.2e-1788.89Show/hide
Query:  ALLGNMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        ALL   +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  ALLGNMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
A0A1S3VC88 60S ribosomal protein L37a2.9e-17100Show/hide
Query:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
K7KN96 Uncharacterized protein5.9e-1898Show/hide
Query:  NMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        N YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  NMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
SwissProt top hitse value%identityAlignment
P0DKK1 60S ribosomal protein L37a-18.7e-1993.75Show/hide
Query:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
P0DKK2 60S ribosomal protein L37a-28.7e-1993.75Show/hide
Query:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Q9SRK6 Putative 60S ribosomal protein L37a-18.7e-1993.75Show/hide
Query:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        Y+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Q9XHE4 60S ribosomal protein L37a6.7e-1997.92Show/hide
Query:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        YAVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Q9ZRS8 60S ribosomal protein L37a2.5e-1895.74Show/hide
Query:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        +AVKRKAVGIWGCKDCGKVKAGGAYTLNT SAVTVRSTIRRLREQTE
Subjt:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Arabidopsis top hitse value%identityAlignment
AT3G10950.1 Zinc-binding ribosomal protein family protein6.2e-2093.75Show/hide
Query:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        Y+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
AT3G60245.1 Zinc-binding ribosomal protein family protein4.0e-1993.62Show/hide
Query:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        Y VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQ E
Subjt:  YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCACATGGAAACAAACAGACTTCTTGGGTCCCCCCTCATCTTTGTTACTAGCGATGACAGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGGAAATATGTATGC
AGTTAAGAGGAAGGCAGTTGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCCGGTGGTGCCTACACTCTCAACACTGCTAGTGCTGTGACAGTGAGAAGCACTA
TTAGGAGGCTGAGAGAGCAGACTGAAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCCACATGGAAACAAACAGACTTCTTGGGTCCCCCCTCATCTTTGTTACTAGCGATGACAGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGGAAATATGTATGC
AGTTAAGAGGAAGGCAGTTGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCCGGTGGTGCCTACACTCTCAACACTGCTAGTGCTGTGACAGTGAGAAGCACTA
TTAGGAGGCTGAGAGAGCAGACTGAAAGTTAA
Protein sequenceShow/hide protein sequence
MTHMETNRLLGSPLIFVTSDDRQREPRRQALLGNMYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES