; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10010969 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010969
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionvacuolar protein sorting-associated protein 55 homolog
Genome locationChr01:1053281..1055507
RNA-Seq ExpressionHG10010969
SyntenyHG10010969
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0006048 - UDP-N-acetylglucosamine biosynthetic process (biological process)
GO:0032511 - late endosome to vacuole transport via multivesicular body sorting pathway (biological process)
GO:0005768 - endosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004610 - phosphoacetylglucosamine mutase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR007262 - Vps55/LEPROT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8055554.1 hypothetical protein FH972_012387 [Carpinus fangiana]5.3e-4771.32Show/hide
Query:  NCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAV
        +CLH  K+  L ILVS GIVLQ LACALYNNWWP+L+ +MYVL+PMPLLFFAGSDSSSLFSES + WVNATKFLTGA+ +GS+AIPAILKHA +IGWGA+
Subjt:  NCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAV

Query:  ALDFSSLLVFVVAIFCYLWMSNEEDYNIL
        A++FSS  +FV+AI CY+ M++E+DYN+L
Subjt:  ALDFSSLLVFVVAIFCYLWMSNEEDYNIL

XP_004150170.1 vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus]2.9e-4568.18Show/hide
Query:  ADMGNCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIG
        A +  CL M KV  L ILVS GIV+Q LACALYNNWWP+LS +MYVL+PMPLLFFAGSDSSSL+++S D W+NATKFLTGA+ VGS+AIP ILKHA +IG
Subjt:  ADMGNCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIG

Query:  WGAVALDFSSLLVFVVAIFCYLWMSNEEDYNI
        WGA+A+D SS +VFVVAI C++ MS ++DY++
Subjt:  WGAVALDFSSLLVFVVAIFCYLWMSNEEDYNI

XP_021599879.1 vacuolar protein sorting-associated protein 55 homolog [Manihot esculenta]2.2e-4571.88Show/hide
Query:  CLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA
        CL   K+  L ILVS GI+LQ LACALYNNWWP+LS +MYVL+PMPLLFFAGSDSSSLFSES + WVNATKFLTGA+AVGS+AIPAILKHA +IGWGA+A
Subjt:  CLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA

Query:  LDFSSLLVFVVAIFCYLWMSNEEDYNIL
        ++ SS  VFV+AI CY+ M++E+ Y+IL
Subjt:  LDFSSLLVFVVAIFCYLWMSNEEDYNIL

XP_022157395.1 vacuolar protein sorting-associated protein 55 homolog [Momordica charantia]2.4e-5580.6Show/hide
Query:  MADMGNCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMI
        MAD+G C HMSK+VTLG+LVS GIVLQFLAC LY NWWPLLS +MY+L+PMPLLFFAGSD+SSL SESGD WVNATKFLTGA+ VGS+AIP ILKHA++I
Subjt:  MADMGNCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMI

Query:  GWGAVALDFSSLLVFVVAIFCYLWMSNEEDYNIL
        GWGA+ALD SSLLVFVVAI CYLWMSNE+DYN L
Subjt:  GWGAVALDFSSLLVFVVAIFCYLWMSNEEDYNIL

XP_038679642.1 vacuolar protein sorting-associated protein 55 homolog [Tripterygium wilfordii]4.9e-4569.77Show/hide
Query:  NCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAV
        +CLH  K+  L ILVS GIVLQ LACALYNNWWP+L+ +MYVL+PMPLLFFAGSD S+L SES D WVNATKFLTGA+AVGS+AIP ILKHA +IGWGA+
Subjt:  NCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAV

Query:  ALDFSSLLVFVVAIFCYLWMSNEEDYNIL
        A++ SS  VFV+AI CY+ M  E+DY++L
Subjt:  ALDFSSLLVFVVAIFCYLWMSNEEDYNIL

TrEMBL top hitse value%identityAlignment
A0A0A0L5B3 Uncharacterized protein1.4e-4568.18Show/hide
Query:  ADMGNCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIG
        A +  CL M KV  L ILVS GIV+Q LACALYNNWWP+LS +MYVL+PMPLLFFAGSDSSSL+++S D W+NATKFLTGA+ VGS+AIP ILKHA +IG
Subjt:  ADMGNCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIG

Query:  WGAVALDFSSLLVFVVAIFCYLWMSNEEDYNI
        WGA+A+D SS +VFVVAI C++ MS ++DY++
Subjt:  WGAVALDFSSLLVFVVAIFCYLWMSNEEDYNI

A0A2C9U468 Uncharacterized protein1.1e-4571.88Show/hide
Query:  CLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA
        CL   K+  L ILVS GI+LQ LACALYNNWWP+LS +MYVL+PMPLLFFAGSDSSSLFSES + WVNATKFLTGA+AVGS+AIPAILKHA +IGWGA+A
Subjt:  CLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA

Query:  LDFSSLLVFVVAIFCYLWMSNEEDYNIL
        ++ SS  VFV+AI CY+ M++E+ Y+IL
Subjt:  LDFSSLLVFVVAIFCYLWMSNEEDYNIL

A0A5N6R6S4 Uncharacterized protein2.5e-4771.32Show/hide
Query:  NCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAV
        +CLH  K+  L ILVS GIVLQ LACALYNNWWP+L+ +MYVL+PMPLLFFAGSDSSSLFSES + WVNATKFLTGA+ +GS+AIPAILKHA +IGWGA+
Subjt:  NCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAV

Query:  ALDFSSLLVFVVAIFCYLWMSNEEDYNIL
        A++FSS  +FV+AI CY+ M++E+DYN+L
Subjt:  ALDFSSLLVFVVAIFCYLWMSNEEDYNIL

A0A6J1DSZ0 vacuolar protein sorting-associated protein 55 homolog1.1e-5580.6Show/hide
Query:  MADMGNCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMI
        MAD+G C HMSK+VTLG+LVS GIVLQFLAC LY NWWPLLS +MY+L+PMPLLFFAGSD+SSL SESGD WVNATKFLTGA+ VGS+AIP ILKHA++I
Subjt:  MADMGNCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMI

Query:  GWGAVALDFSSLLVFVVAIFCYLWMSNEEDYNIL
        GWGA+ALD SSLLVFVVAI CYLWMSNE+DYN L
Subjt:  GWGAVALDFSSLLVFVVAIFCYLWMSNEEDYNIL

A0A7J7CJN6 Vacuolar protein sorting 55 (VPS55) family protein isoform 12.4e-4569.77Show/hide
Query:  NCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAV
        +CLH  K+  L ILVS GIVLQ LACALYNNWWP+L+ +MYVL+PMPLLFFAGSD S+L SES D WVNATKFLTGA+AVGS+AIP ILKHA +IGWGA+
Subjt:  NCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAV

Query:  ALDFSSLLVFVVAIFCYLWMSNEEDYNIL
        A++ SS  VFV+AI CY+ M  E+DY++L
Subjt:  ALDFSSLLVFVVAIFCYLWMSNEEDYNIL

SwissProt top hitse value%identityAlignment
P47111 Vacuolar protein sorting-associated protein 552.2e-0826.98Show/hide
Query:  MSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMP-LLFFAGS--DSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA
        ++K+++L   ++ G +L  L+CAL++N++PL   ++++L P+P  +F AG+   +S   S+S +   +   FLTG      +A+P +  H  +IG  +  
Subjt:  MSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMP-LLFFAGS--DSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA

Query:  LDFSSLLVFVVAIFCYLWMSNEEDYN
        +     L+   +I  + W   ++D+N
Subjt:  LDFSSLLVFVVAIFCYLWMSNEEDYN

Q9AST6 Vacuolar protein sorting-associated protein 55 homolog2.2e-4368.55Show/hide
Query:  CLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA
        CL M K+  L ILVS GIVLQ LACAL+NNWWP+LS +MYVL+PMPLLFF GSDS+SLF+ES + W+NA KFLTGA+AVGSVAIP+ILKHA +IGWGA+A
Subjt:  CLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA

Query:  LDFSSLLVFVVAIFCYLWMSNEED
        LD SS +VF+VAI  Y+ + +  D
Subjt:  LDFSSLLVFVVAIFCYLWMSNEED

Q9UUH1 Vacuolar protein sorting-associated protein 555.9e-0927.2Show/hide
Query:  MSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDR-WVNATKFLTGATAVGSVAIPAILKHADMIGWGAVALD
        + K++ L  +++ G +L  L+CAL+ NW+PLL  + ++L P+P L      +S  F +  DR  ++  +F  GAT     A+P +  +  +IG  A  + 
Subjt:  MSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDR-WVNATKFLTGATAVGSVAIPAILKHADMIGWGAVALD

Query:  F--SSLLVFVVAIFCYLWMSNEEDY
            S++  V+ ++   ++ +EE++
Subjt:  F--SSLLVFVVAIFCYLWMSNEEDY

Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein1.5e-4468.55Show/hide
Query:  CLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA
        CL M K+  L ILVS GIVLQ LACAL+NNWWP+LS +MYVL+PMPLLFF GSDS+SLF+ES + W+NA KFLTGA+AVGSVAIP+ILKHA +IGWGA+A
Subjt:  CLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA

Query:  LDFSSLLVFVVAIFCYLWMSNEED
        LD SS +VF+VAI  Y+ + +  D
Subjt:  LDFSSLLVFVVAIFCYLWMSNEED

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein1.5e-4468.55Show/hide
Query:  CLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA
        CL M K+  L ILVS GIVLQ LACAL+NNWWP+LS +MYVL+PMPLLFF GSDS+SLF+ES + W+NA KFLTGA+AVGSVAIP+ILKHA +IGWGA+A
Subjt:  CLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA

Query:  LDFSSLLVFVVAIFCYLWMSNEED
        LD SS +VF+VAI  Y+ + +  D
Subjt:  LDFSSLLVFVVAIFCYLWMSNEED

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein1.5e-4468.55Show/hide
Query:  CLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA
        CL M K+  L ILVS GIVLQ LACAL+NNWWP+LS +MYVL+PMPLLFF GSDS+SLF+ES + W+NA KFLTGA+AVGSVAIP+ILKHA +IGWGA+A
Subjt:  CLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA

Query:  LDFSSLLVFVVAIFCYLWMSNEED
        LD SS +VF+VAI  Y+ + +  D
Subjt:  LDFSSLLVFVVAIFCYLWMSNEED

AT1G32410.4 Vacuolar protein sorting 55 (VPS55) family protein1.5e-4468.55Show/hide
Query:  CLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA
        CL M K+  L ILVS GIVLQ LACAL+NNWWP+LS +MYVL+PMPLLFF GSDS+SLF+ES + W+NA KFLTGA+AVGSVAIP+ILKHA +IGWGA+A
Subjt:  CLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA

Query:  LDFSSLLVFVVAIFCYLWMSNEED
        LD SS +VF+VAI  Y+ + +  D
Subjt:  LDFSSLLVFVVAIFCYLWMSNEED

AT1G32410.5 Vacuolar protein sorting 55 (VPS55) family protein1.5e-4468.55Show/hide
Query:  CLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA
        CL M K+  L ILVS GIVLQ LACAL+NNWWP+LS +MYVL+PMPLLFF GSDS+SLF+ES + W+NA KFLTGA+AVGSVAIP+ILKHA +IGWGA+A
Subjt:  CLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVA

Query:  LDFSSLLVFVVAIFCYLWMSNEED
        LD SS +VF+VAI  Y+ + +  D
Subjt:  LDFSSLLVFVVAIFCYLWMSNEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACATGGGAAACTGCTTGCACATGAGCAAAGTTGTAACACTAGGAATCTTGGTTTCTGCAGGAATTGTGTTGCAGTTTTTGGCTTGTGCTTTGTACAATAACTG
GTGGCCATTGCTGAGTGCGGTTATGTATGTTCTTATCCCAATGCCTTTGCTGTTTTTTGCTGGCTCCGATAGTTCTTCGCTATTTTCCGAATCGGGCGACAGGTGGGTGA
ATGCGACAAAATTTTTAACGGGAGCTACGGCGGTTGGAAGCGTTGCCATACCTGCAATTTTGAAGCATGCTGATATGATAGGCTGGGGAGCAGTTGCACTGGACTTCTCT
TCCCTTTTAGTCTTTGTGGTGGCCATTTTTTGTTATCTATGGATGAGTAATGAAGAAGACTACAATATACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACATGGGAAACTGCTTGCACATGAGCAAAGTTGTAACACTAGGAATCTTGGTTTCTGCAGGAATTGTGTTGCAGTTTTTGGCTTGTGCTTTGTACAATAACTG
GTGGCCATTGCTGAGTGCGGTTATGTATGTTCTTATCCCAATGCCTTTGCTGTTTTTTGCTGGCTCCGATAGTTCTTCGCTATTTTCCGAATCGGGCGACAGGTGGGTGA
ATGCGACAAAATTTTTAACGGGAGCTACGGCGGTTGGAAGCGTTGCCATACCTGCAATTTTGAAGCATGCTGATATGATAGGCTGGGGAGCAGTTGCACTGGACTTCTCT
TCCCTTTTAGTCTTTGTGGTGGCCATTTTTTGTTATCTATGGATGAGTAATGAAGAAGACTACAATATACTCTAA
Protein sequenceShow/hide protein sequence
MADMGNCLHMSKVVTLGILVSAGIVLQFLACALYNNWWPLLSAVMYVLIPMPLLFFAGSDSSSLFSESGDRWVNATKFLTGATAVGSVAIPAILKHADMIGWGAVALDFS
SLLVFVVAIFCYLWMSNEEDYNIL