; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10010976 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010976
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontobamovirus multiplication protein 2B
Genome locationChr01:1123480..1124275
RNA-Seq ExpressionHG10010976
SyntenyHG10010976
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571829.1 Tobamovirus multiplication protein 2B, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1061.04Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT
        MATASASGRSNRDGTAKAMVADHISQS                  AQL KLPKNLLAKA TIKNT K+     Q+++
Subjt:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT

KAG7011518.1 Tobamovirus multiplication protein 2B, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-1167.14Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQS-----------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT
        MATASASGRSNRDGTAKAMVADHISQS           AQL KLPKNLLAKA TIKNT K+     Q+++
Subjt:  MATASASGRSNRDGTAKAMVADHISQS-----------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT

XP_023553909.1 tobamovirus multiplication protein 2B isoform X4 [Cucurbita pepo subsp. pepo]1.3e-1061.04Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT
        MATASASGRSNRDGTAKAMVADHISQS                  AQL KLPKNLLAKA TIKNT K+     Q+++
Subjt:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT

XP_038877830.1 tobamovirus multiplication protein 2B isoform X1 [Benincasa hispida]2.7e-1161.04Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT
        MATASASGRSNRDGTAKAMVADHISQS                  AQL KLPKNLLAK PTIKN GK+     Q+++
Subjt:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT

XP_038877831.1 tobamovirus multiplication protein 2B isoform X2 [Benincasa hispida]2.7e-1161.04Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT
        MATASASGRSNRDGTAKAMVADHISQS                  AQL KLPKNLLAK PTIKN GK+     Q+++
Subjt:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT

TrEMBL top hitse value%identityAlignment
A0A0A0LI80 Uncharacterized protein6.4e-1159.74Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT
        MATAS SGRSNRDGTAKAMVADHISQS                  AQL KLPKNLLAKA T+KNTGK+     Q+++
Subjt:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT

A0A1S3CRH1 tobamovirus multiplication protein 2B isoform X12.4e-1058.44Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT
        MATAS SGRSNRDGTAKAMVADHISQS                  AQL KLPKNLLAKA T++NTGK+     Q+++
Subjt:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT

A0A6J1DSI3 tobamovirus multiplication protein 2B6.4e-1167.65Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKV
        MATASAS RS RDGTAKAMVADHISQS                  AQLIKLPKNLLAKAP IKNTGK+
Subjt:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKV

A0A6J1GLF5 tobamovirus multiplication protein 2B isoform X21.9e-1059.74Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT
        MATASASGRSNRDGTAK MVADHISQS                  AQL KLPKNLLAKA TIKNT K+     Q+++
Subjt:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT

A0A6J1GMU0 tobamovirus multiplication protein 2B isoform X41.9e-1059.74Show/hide
Query:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT
        MATASASGRSNRDGTAK MVADHISQS                  AQL KLPKNLLAKA TIKNT K+     Q+++
Subjt:  MATASASGRSNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT

SwissProt top hitse value%identityAlignment
Q8H960 Tobamovirus multiplication protein 2B3.3e-0445.57Show/hide
Query:  MATASASGR--SNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT
        MATAS + R  S  D TAKA+VAD ISQ+                  AQL KLPKNLLAKA   K TG+  +   Q+I+
Subjt:  MATASASGR--SNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT

Arabidopsis top hitse value%identityAlignment
AT1G32370.1 tobamovirus multiplication 2B2.3e-0545.57Show/hide
Query:  MATASASGR--SNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT
        MATAS + R  S  D TAKA+VAD ISQ+                  AQL KLPKNLLAKA   K TG+  +   Q+I+
Subjt:  MATASASGR--SNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT

AT1G32370.2 tobamovirus multiplication 2B2.3e-0545.57Show/hide
Query:  MATASASGR--SNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT
        MATAS + R  S  D TAKA+VAD ISQ+                  AQL KLPKNLLAKA   K TG+  +   Q+I+
Subjt:  MATASASGR--SNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT

AT1G32370.3 tobamovirus multiplication 2B2.3e-0545.57Show/hide
Query:  MATASASGR--SNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT
        MATAS + R  S  D TAKA+VAD ISQ+                  AQL KLPKNLLAKA   K TG+  +   Q+I+
Subjt:  MATASASGR--SNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT

AT1G32370.4 tobamovirus multiplication 2B2.3e-0545.57Show/hide
Query:  MATASASGR--SNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT
        MATAS + R  S  D TAKA+VAD ISQ+                  AQL KLPKNLLAKA   K TG+  +   Q+I+
Subjt:  MATASASGR--SNRDGTAKAMVADHISQS------------------AQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCGCTTCCGCATCAGGTCGAAGCAACAGGGATGGAACGGCCAAAGCCATGGTGGCCGATCACATTTCTCAATCGGCTCAGTTAATAAAGTTGCCAAAGAATCT
TTTGGCGAAAGCACCTACTATTAAAAATACTGGGAAAGTATGTAGCATCAGACATCAGTTAATAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCGCTTCCGCATCAGGTCGAAGCAACAGGGATGGAACGGCCAAAGCCATGGTGGCCGATCACATTTCTCAATCGGCTCAGTTAATAAAGTTGCCAAAGAATCT
TTTGGCGAAAGCACCTACTATTAAAAATACTGGGAAAGTATGTAGCATCAGACATCAGTTAATAACTTGA
Protein sequenceShow/hide protein sequence
MATASASGRSNRDGTAKAMVADHISQSAQLIKLPKNLLAKAPTIKNTGKVCSIRHQLIT