; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10011037 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011037
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionreticulocalbin-2
Genome locationChr01:1798007..1798773
RNA-Seq ExpressionHG10011037
SyntenyHG10011037
Gene Ontology termsGO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK11288.1 reticulocalbin-2 [Cucumis melo var. makuwa]3.3e-6881.88Show/hide
Query:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL
        FLHPEDSSNYRIQNWLL +KMKRMDHD DGKL+FDEFLHH Y+IYK+YIEFETQ DD+P+AEEKFDELDLDED            EVLSVEE+RPLFQYL
Subjt:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL

Query:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEED-YHDEL
        HPGEVSYAQHYTSHLINEADDNKDGYLT+DEMLNHEY FYSTVYEN +GDYE+D YHDEL
Subjt:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEED-YHDEL

XP_008455987.1 PREDICTED: reticulocalbin-2 [Cucumis melo]8.6e-6982.5Show/hide
Query:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL
        FLHPEDSSNYRIQNWLL +KMKRMDHD DGKL+FDEFLHH YDIYK+YIEFETQ DD+P+AEEKFDELDLDED            EVLSVEE+RPLFQYL
Subjt:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL

Query:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEED-YHDEL
        HPGEVSYAQHYTSHLINEADDNKDGYLT+DEMLNHEY FYSTVYEN +GDYE+D YHDEL
Subjt:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEED-YHDEL

XP_011651314.1 reticulocalbin-2 [Cucumis sativus]2.1e-7084.28Show/hide
Query:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL
        FLHPEDSSNYRIQNWLL +KMKRMDHD DGKL+FDEFLHH YDIYK+YIEFETQ +DVPSAEEKFDELDLDED            EVLS EELRPLFQYL
Subjt:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL

Query:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL
        HPGEVSYAQHYTSHLINEADDNKDGYLT+DEMLNHEYVFYSTVYEN +GDYE+DYHDEL
Subjt:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL

XP_022141310.1 reticulocalbin-2 [Momordica charantia]6.2e-6781.13Show/hide
Query:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL
        FLHPEDSSNYRIQNWLL EKMKRMD+D DGKL+FDEFLHH +DIYKSYIEFETQ DDVP+AEEKFDELDLDED            E+LSVEELRPLFQYL
Subjt:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL

Query:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL
        HPGE+SYAQHYTSHLI EADDNKDGYL+LDEMLNHEYVFY++VYE  +GDYE+DYHDEL
Subjt:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL

XP_022945265.1 reticulocalbin-2 isoform X1 [Cucurbita moschata]6.8e-6679.25Show/hide
Query:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL
        FLHP+DSSNYRIQNWLL EKMKRMD+D DGKLSFDEFLHHAYDIYKSYIEFETQ DDVP+AEEKFDELDLDED            EVL+VEELRPLFQYL
Subjt:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL

Query:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL
        +PGE+S+AQHY +HLINEADDNKDG+LTL+EML HEYVFY+T+YEN +GDYE+D+HDEL
Subjt:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL

TrEMBL top hitse value%identityAlignment
A0A0A0LAH3 Uncharacterized protein9.9e-7184.28Show/hide
Query:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL
        FLHPEDSSNYRIQNWLL +KMKRMDHD DGKL+FDEFLHH YDIYK+YIEFETQ +DVPSAEEKFDELDLDED            EVLS EELRPLFQYL
Subjt:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL

Query:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL
        HPGEVSYAQHYTSHLINEADDNKDGYLT+DEMLNHEYVFYSTVYEN +GDYE+DYHDEL
Subjt:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL

A0A1S3C255 reticulocalbin-24.2e-6982.5Show/hide
Query:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL
        FLHPEDSSNYRIQNWLL +KMKRMDHD DGKL+FDEFLHH YDIYK+YIEFETQ DD+P+AEEKFDELDLDED            EVLSVEE+RPLFQYL
Subjt:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL

Query:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEED-YHDEL
        HPGEVSYAQHYTSHLINEADDNKDGYLT+DEMLNHEY FYSTVYEN +GDYE+D YHDEL
Subjt:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEED-YHDEL

A0A5A7U5L5 Reticulocalbin-24.2e-6982.5Show/hide
Query:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL
        FLHPEDSSNYRIQNWLL +KMKRMDHD DGKL+FDEFLHH YDIYK+YIEFETQ DD+P+AEEKFDELDLDED            EVLSVEE+RPLFQYL
Subjt:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL

Query:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEED-YHDEL
        HPGEVSYAQHYTSHLINEADDNKDGYLT+DEMLNHEY FYSTVYEN +GDYE+D YHDEL
Subjt:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEED-YHDEL

A0A5D3CJD2 Reticulocalbin-21.6e-6881.88Show/hide
Query:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL
        FLHPEDSSNYRIQNWLL +KMKRMDHD DGKL+FDEFLHH Y+IYK+YIEFETQ DD+P+AEEKFDELDLDED            EVLSVEE+RPLFQYL
Subjt:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL

Query:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEED-YHDEL
        HPGEVSYAQHYTSHLINEADDNKDGYLT+DEMLNHEY FYSTVYEN +GDYE+D YHDEL
Subjt:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEED-YHDEL

A0A6J1CHQ2 reticulocalbin-23.0e-6781.13Show/hide
Query:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL
        FLHPEDSSNYRIQNWLL EKMKRMD+D DGKL+FDEFLHH +DIYKSYIEFETQ DDVP+AEEKFDELDLDED            E+LSVEELRPLFQYL
Subjt:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQYL

Query:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL
        HPGE+SYAQHYTSHLI EADDNKDGYL+LDEMLNHEYVFY++VYE  +GDYE+DYHDEL
Subjt:  HPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL

SwissProt top hitse value%identityAlignment
Q05186 Reticulocalbin-11.2e-0427.95Show/hide
Query:  SFLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDEL-DLDEDEYGNACGLINGSEVLSVEELRPLFQ
        +FLHPE+  +  ++  ++ E ++ +D +GDG +  DE++   +    S+ +   + D V S  E+F++  DL++D              L  +E+R    
Subjt:  SFLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDEL-DLDEDEYGNACGLINGSEVLSVEELRPLFQ

Query:  YLHPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL
        ++ P +  +AQ    HL+ E+D NKD  LT +E+L++  +F  +   N   D  ++ HDEL
Subjt:  YLHPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL

Q15293 Reticulocalbin-14.1e-0529.19Show/hide
Query:  SFLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDEL-DLDEDEYGNACGLINGSEVLSVEELRPLFQ
        +FLHPE+  +  ++  ++ E ++ +D +GDG +  DE++   +    S+ E   + D V S  E+F+E  DL++D              L  +E+R    
Subjt:  SFLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDEL-DLDEDEYGNACGLINGSEVLSVEELRPLFQ

Query:  YLHPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL
        ++ P +  +AQ    HL+ E+D NKD  LT +E+L +  +F  +   N   D  ++ HDEL
Subjt:  YLHPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL

Q5BKL9 45 kDa calcium-binding protein1.6e-0425.79Show/hide
Query:  SFLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQY
        SFLHPE S    +  +++ E ++ +D DGD KL+  EF+       ++    +   D V   +++++E+ +D +  G          ++++EEL    +Y
Subjt:  SFLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQY

Query:  LHPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDE
        + P     A +    +I  AD+N+D +L+L+E+L +   F  +       DY  + H+E
Subjt:  LHPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDE

Q66JA6 45 kDa calcium-binding protein4.5e-0425.79Show/hide
Query:  SFLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQY
        SFLHPE S    +  +++ E ++ +D DGD KL+  EF+       ++    +   D V   +++++E+ +D +  G          ++++EEL    +Y
Subjt:  SFLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQY

Query:  LHPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDE
        + P     A +    +I  AD+N+D  L+L+E+L +   F  +       DY  + H+E
Subjt:  LHPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDE

Q6IQP3 Calumenin-A5.4e-0527.66Show/hide
Query:  SFLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDEL-DLDEDEYGNACGLINGSEVLSVEELRPLFQ
        +FLHPE+  +  +++ ++ E M+ +D +GDG +  +E++    D+Y    E + + + V +  E+F E  D ++D      G ++  E +          
Subjt:  SFLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDEL-DLDEDEYGNACGLINGSEVLSVEELRPLFQ

Query:  YLHPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVF
        ++ P +  +A+    HL+ E+D NKDG LT +E+LN   +F
Subjt:  YLHPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVF

Arabidopsis top hitse value%identityAlignment
AT4G27790.1 Calcium-binding EF hand family protein2.1e-3345.96Show/hide
Query:  SFLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDD-VPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQ
        +FLHPEDS N   Q W+L E+M  MD +GDGKL + EF+ +AY++YK + +FE + D+ VP+ +  F E+D D+D +            L  +ELRP+ Q
Subjt:  SFLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDD-VPSAEEKFDELDLDEDEYGNACGLINGSEVLSVEELRPLFQ

Query:  YLHPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL
        YL PGE+SYA+ Y++ L +EAD++KDG L+L+EML+HE VFY  V+  +  D +   HDEL
Subjt:  YLHPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL

AT5G08580.1 Calcium-binding EF hand family protein4.0e-2437.8Show/hide
Query:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQS----DDVPS--AEEKFDELDLDEDEYGNACGLINGSEVLSVEELR
        FLHP D+ N ++  WL  E+++  D D DGK+SF+EF H  +D  ++Y E    S     D+P   A++ F +LD ++D Y            LS  EL 
Subjt:  FLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQS----DDVPS--AEEKFDELDLDEDEYGNACGLINGSEVLSVEELR

Query:  PLFQYLHPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDE
        P+   +HP E  YA+    ++I++AD +KD  LTL EM+ H YVFYS +++ +D D +  +HDE
Subjt:  PLFQYLHPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTTGATTTGAAACTTGTGTTTCCTGACAAAAAATGGTTTGAGATATTTGTATCCTGCAGTTTCCTGCACCCAGAAGATAGCAGCAATTACCGAATACAGAACTG
GCTGTTGGGAGAGAAAATGAAGCGCATGGACCATGACGGAGATGGAAAGCTCAGTTTTGATGAATTTCTCCACCATGCATATGATATATACAAGAGCTATATCGAATTCG
AAACTCAAAGCGATGACGTACCGAGTGCCGAAGAGAAGTTTGATGAGCTTGATCTTGACGAGGACGAGTATGGCAATGCATGTGGATTGATTAATGGCAGTGAAGTATTG
TCAGTGGAGGAATTAAGGCCATTGTTCCAGTATCTACACCCTGGAGAAGTGTCTTATGCCCAACATTACACAAGTCATTTGATTAATGAGGCTGATGACAATAAAGATGG
CTACTTAACACTTGATGAGATGCTTAATCATGAGTATGTTTTCTACAGCACAGTATATGAAAATAACGATGGCGATTATGAAGAAGATTACCATGATGAACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTATTTGATTTGAAACTTGTGTTTCCTGACAAAAAATGGTTTGAGATATTTGTATCCTGCAGTTTCCTGCACCCAGAAGATAGCAGCAATTACCGAATACAGAACTG
GCTGTTGGGAGAGAAAATGAAGCGCATGGACCATGACGGAGATGGAAAGCTCAGTTTTGATGAATTTCTCCACCATGCATATGATATATACAAGAGCTATATCGAATTCG
AAACTCAAAGCGATGACGTACCGAGTGCCGAAGAGAAGTTTGATGAGCTTGATCTTGACGAGGACGAGTATGGCAATGCATGTGGATTGATTAATGGCAGTGAAGTATTG
TCAGTGGAGGAATTAAGGCCATTGTTCCAGTATCTACACCCTGGAGAAGTGTCTTATGCCCAACATTACACAAGTCATTTGATTAATGAGGCTGATGACAATAAAGATGG
CTACTTAACACTTGATGAGATGCTTAATCATGAGTATGTTTTCTACAGCACAGTATATGAAAATAACGATGGCGATTATGAAGAAGATTACCATGATGAACTTTGA
Protein sequenceShow/hide protein sequence
MLFDLKLVFPDKKWFEIFVSCSFLHPEDSSNYRIQNWLLGEKMKRMDHDGDGKLSFDEFLHHAYDIYKSYIEFETQSDDVPSAEEKFDELDLDEDEYGNACGLINGSEVL
SVEELRPLFQYLHPGEVSYAQHYTSHLINEADDNKDGYLTLDEMLNHEYVFYSTVYENNDGDYEEDYHDEL