; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10011058 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011058
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description50S ribosomal protein L33-like
Genome locationChr01:1959372..1960603
RNA-Seq ExpressionHG10011058
SyntenyHG10011058
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001705 - Ribosomal protein L33
IPR011332 - Zinc-binding ribosomal protein
IPR018264 - Ribosomal protein L33, conserved site
IPR038584 - Ribosomal protein L33 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058825.1 50S ribosomal protein L33-like [Cucumis melo var. makuwa]2.9e-6890Show/hide
Query:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSA--SLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPD
        MATTIQRFCLDL LSCGKRN+FLS+S SSAPSNF+TFNS SF A  SL+LS VPNVKG L QRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDP 
Subjt:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSA--SLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPD

Query:  KKKKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK
        KKKKTRRKGG+KDFKIVRLSSTARTGFFYAKKKSRKMADKIE+QKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK

KAE8650541.1 hypothetical protein Csa_009952 [Cucumis sativus]8.7e-6586.25Show/hide
Query:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSASLSLSV--VPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPD
        M TTIQRFCLDL LSCG RN FLSDS SS PSNF+TFNS SFSA+LSL++  +PN+KG LSQRALERSIRY SVICMAKRYAP+TTKRKRLSRKRGGDP 
Subjt:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSASLSLSV--VPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPD

Query:  KKKKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK
        KKKKTRRKGG KDFKIVRLSSTARTGFFYAKKKSRK+ADKIE+QKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK

KAG7015026.1 rpmG, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-6383.54Show/hide
Query:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSASLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPDKK
        MA TI+R CLD ALSCG+RNRFL +S SS P +FV+F  LSFSA+LSLSVVPNVK SLSQ A ERSIRYGSVICMAKRYAP+TTKRKRLSRKRGGDP+KK
Subjt:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSASLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPDKK

Query:  KKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK
        KKTRRKGG+KDFKI+RLSSTA TGFFYAKKKSRKMADKIELQK+DP+A RHVLFTEVK
Subjt:  KKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK

XP_008456021.1 PREDICTED: uncharacterized protein LOC103496073 [Cucumis melo]2.9e-6890Show/hide
Query:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSA--SLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPD
        MATTIQRFCLDL LSCGKRN+FLS+S SSAPSNF+TFNS SF A  SL+LS VPNVKG L QRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDP 
Subjt:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSA--SLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPD

Query:  KKKKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK
        KKKKTRRKGG+KDFKIVRLSSTARTGFFYAKKKSRKMADKIE+QKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK

XP_038880588.1 uncharacterized protein LOC120072240 [Benincasa hispida]4.0e-7091.82Show/hide
Query:  MMATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSASLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPDK
        MMATTIQRFCLDLA+SCGKRNRFLSDS SSA  N VTFNSLSFSA+LSLSVVPN+KGSLSQRA ERSIRY SVICMAKRYAPDTTKRKRLSRKRGGDP K
Subjt:  MMATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSASLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPDK

Query:  KKKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK
        KKKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADK+EL+KYDPIANRHVLF EVK
Subjt:  KKKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK

TrEMBL top hitse value%identityAlignment
A0A0A0LAF8 Uncharacterized protein2.5e-6279.77Show/hide
Query:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSASLSLSV--VPNVKG-------------SLSQRALERSIRYGSVICMAKRYAPDTTK
        M TTIQRFCLDL LSCG RN FLSDS SS PSNF+TFNS SFSA+LSL++  +PN+KG              LSQRALERSIRY SVICMAKRYAP+TTK
Subjt:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSASLSLSV--VPNVKG-------------SLSQRALERSIRYGSVICMAKRYAPDTTK

Query:  RKRLSRKRGGDPDKKKKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK
        RKRLSRKRGGDP KKKKTRRKGG KDFKIVRLSSTARTGFFYAKKKSRK+ADKIE+QKYDPIANRHVLFTEVK
Subjt:  RKRLSRKRGGDPDKKKKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK

A0A1S3C284 uncharacterized protein LOC1034960731.4e-6890Show/hide
Query:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSA--SLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPD
        MATTIQRFCLDL LSCGKRN+FLS+S SSAPSNF+TFNS SF A  SL+LS VPNVKG L QRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDP 
Subjt:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSA--SLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPD

Query:  KKKKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK
        KKKKTRRKGG+KDFKIVRLSSTARTGFFYAKKKSRKMADKIE+QKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK

A0A5A7UZ21 50S ribosomal protein L33-like1.4e-6890Show/hide
Query:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSA--SLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPD
        MATTIQRFCLDL LSCGKRN+FLS+S SSAPSNF+TFNS SF A  SL+LS VPNVKG L QRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDP 
Subjt:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSA--SLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPD

Query:  KKKKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK
        KKKKTRRKGG+KDFKIVRLSSTARTGFFYAKKKSRKMADKIE+QKYDPIANRHVLFTEVK
Subjt:  KKKKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK

A0A6J1E445 uncharacterized protein LOC111430611 isoform X11.7e-6182.17Show/hide
Query:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSASLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPDKK
        MA TI+R CLD ALSCG+RNRFL DS SS P +FV+F  LSFSA+LSLSVVPNVK SLSQ A ERSIR+GSVICMA+RYAP+ TKRKRLSRKRGGDP+KK
Subjt:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSASLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPDKK

Query:  KKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEV
        KKTRRKGG+KDFKI+RLSSTA TGFFYAKKKSRKMADKIELQK+DP+A RHVLFTEV
Subjt:  KKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEV

A0A6J1E4T6 uncharacterized protein LOC111430611 isoform X24.3e-6282.28Show/hide
Query:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSASLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPDKK
        MA TI+R CLD ALSCG+RNRFL DS SS P +FV+F  LSFSA+LSLSVVPNVK SLSQ A ERSIR+GSVICMA+RYAP+ TKRKRLSRKRGGDP+KK
Subjt:  MATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSASLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPDKK

Query:  KKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK
        KKTRRKGG+KDFKI+RLSSTA TGFFYAKKKSRKMADKIELQK+DP+A RHVLFTEVK
Subjt:  KKTRRKGGKKDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK

SwissProt top hitse value%identityAlignment
B6IN38 50S ribosomal protein L332.9e-0750.98Show/hide
Query:  KKDFKIVRLSSTARTGFFYAKKKS-RKMADKIELQKYDPIANRHVLFTEVK
        K++  +++L S+A TGFFY KKK+ RK  +K+E +KYDP+A +HV+F E K
Subjt:  KKDFKIVRLSSTARTGFFYAKKKS-RKMADKIELQKYDPIANRHVLFTEVK

Q2W1A2 50S ribosomal protein L331.5e-0654.35Show/hide
Query:  IVRLSSTARTGFFY-AKKKSRKMADKIELQKYDPIANRHVLFTEVK
        +++L STA TGFFY AKK  RK  +K+E +KYDP+  +HV F E K
Subjt:  IVRLSSTARTGFFY-AKKKSRKMADKIELQKYDPIANRHVLFTEVK

Q3YSN4 50S ribosomal protein L336.6e-0750Show/hide
Query:  IVRLSSTARTGFFYAKKKS-RKMADKIELQKYDPIANRHVLFTEVK
        +V+L+S+A+TGFFY KK++ +K+ +K+  +KYDP+  +HVLF+E K
Subjt:  IVRLSSTARTGFFYAKKKS-RKMADKIELQKYDPIANRHVLFTEVK

Q5FFJ4 50S ribosomal protein L335.0e-0752.17Show/hide
Query:  IVRLSSTARTGFFYAKKKS-RKMADKIELQKYDPIANRHVLFTEVK
        +V+L+S+A TG+FY KK++ +K+ +K+  +KYDP+A +HVLFTE K
Subjt:  IVRLSSTARTGFFYAKKKS-RKMADKIELQKYDPIANRHVLFTEVK

Q5HBV6 50S ribosomal protein L335.0e-0752.17Show/hide
Query:  IVRLSSTARTGFFYAKKKS-RKMADKIELQKYDPIANRHVLFTEVK
        +V+L+S+A TG+FY KK++ +K+ +K+  +KYDP+A +HVLFTE K
Subjt:  IVRLSSTARTGFFYAKKKS-RKMADKIELQKYDPIANRHVLFTEVK

Arabidopsis top hitse value%identityAlignment
AT3G06320.1 Ribosomal protein L33 family protein6.5e-1060.78Show/hide
Query:  KKDFKIVRLSSTARTGFFYAKKKSRK-MADKIELQKYDPIANRHVLFTEVK
        KK F  +RL S A TGFFY K+KS K + +K+E +KYDP  NRHVLFTE K
Subjt:  KKDFKIVRLSSTARTGFFYAKKKSRK-MADKIELQKYDPIANRHVLFTEVK

AT5G18790.1 Ribosomal protein L33 family protein6.5e-1060.78Show/hide
Query:  KKDFKIVRLSSTARTGFFYAKKKSRK-MADKIELQKYDPIANRHVLFTEVK
        KK F  +RL S A TGFFY K+KS K + +K+E +KYDP  NRHVLFTE K
Subjt:  KKDFKIVRLSSTARTGFFYAKKKSRK-MADKIELQKYDPIANRHVLFTEVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCGACAACAATTCAAAGGTTTTGTTTGGATTTGGCGCTTTCTTGTGGAAAAAGGAATCGATTTCTCAGTGATTCTCCGTCTTCAGCTCCTTCAAACTTCGTCAC
TTTCAACTCTCTCTCCTTCTCTGCTTCCCTCTCGCTGAGCGTCGTTCCCAATGTCAAAGGATCGTTGTCGCAGAGGGCTCTGGAGAGATCAATTCGTTATGGATCCGTAA
TTTGCATGGCCAAAAGATATGCTCCTGACACTACAAAGAGAAAGAGGTTGAGTAGGAAGAGAGGTGGTGATCCAGACAAGAAAAAGAAGACAAGGAGGAAAGGAGGAAAG
AAAGATTTCAAAATAGTCCGACTCTCCTCAACTGCTAGGACTGGTTTTTTCTATGCCAAGAAGAAAAGCAGGAAGATGGCTGATAAGATTGAGCTCCAGAAATATGACCC
TATTGCAAATCGCCATGTTCTGTTCACTGAAGTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGCGACAACAATTCAAAGGTTTTGTTTGGATTTGGCGCTTTCTTGTGGAAAAAGGAATCGATTTCTCAGTGATTCTCCGTCTTCAGCTCCTTCAAACTTCGTCAC
TTTCAACTCTCTCTCCTTCTCTGCTTCCCTCTCGCTGAGCGTCGTTCCCAATGTCAAAGGATCGTTGTCGCAGAGGGCTCTGGAGAGATCAATTCGTTATGGATCCGTAA
TTTGCATGGCCAAAAGATATGCTCCTGACACTACAAAGAGAAAGAGGTTGAGTAGGAAGAGAGGTGGTGATCCAGACAAGAAAAAGAAGACAAGGAGGAAAGGAGGAAAG
AAAGATTTCAAAATAGTCCGACTCTCCTCAACTGCTAGGACTGGTTTTTTCTATGCCAAGAAGAAAAGCAGGAAGATGGCTGATAAGATTGAGCTCCAGAAATATGACCC
TATTGCAAATCGCCATGTTCTGTTCACTGAAGTCAAGTGA
Protein sequenceShow/hide protein sequence
MMATTIQRFCLDLALSCGKRNRFLSDSPSSAPSNFVTFNSLSFSASLSLSVVPNVKGSLSQRALERSIRYGSVICMAKRYAPDTTKRKRLSRKRGGDPDKKKKTRRKGGK
KDFKIVRLSSTARTGFFYAKKKSRKMADKIELQKYDPIANRHVLFTEVK