; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10011084 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011084
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionFerredoxin
Genome locationChr01:2256424..2256855
RNA-Seq ExpressionHG10011084
SyntenyHG10011084
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0010008 - endosome membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR001041 - 2Fe-2S ferredoxin-type iron-sulfur binding domain
IPR006058 - 2Fe-2S ferredoxin, iron-sulphur binding site
IPR010241 - Ferredoxin [2Fe-2S], plant
IPR012675 - Beta-grasp domain superfamily
IPR036010 - 2Fe-2S ferredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4352271.1 hypothetical protein G4B88_029227 [Cannabis sativa]5.6e-4766.9Show/hide
Query:  ASLITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGK
        ++ + +TSF+  QP A +LR VPNVG+ LFG  K  SRGGRVTAMA Y+VKLITP G+  +ECPD+ Y+LD AE+ GIDLP+SCRAGACS+C+GK+  GK
Subjt:  ASLITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGK

Query:  VDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS
        VDQSD SFLD+DQ+A+GWVLTC+A PLSDVVIET KEEEF++
Subjt:  VDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS

KAF4357178.1 hypothetical protein F8388_003325 [Cannabis sativa]5.6e-4766.9Show/hide
Query:  ASLITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGK
        ++ + +TSF+  QP A +LR VPNVG+ LFG  K  SRGGRVTAMA Y+VKLITP G+  +ECPD+ Y+LD AE+ GIDLP+SCRAGACS+C+GK+  GK
Subjt:  ASLITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGK

Query:  VDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS
        VDQSD SFLD+DQ+A+GWVLTC+A PLSDVVIET KEEEF++
Subjt:  VDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS

TYK11179.1 ferredoxin-like [Cucumis melo var. makuwa]1.9e-4771.22Show/hide
Query:  ITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQ
        ITTTSFL  Q    TLR  PNVGE LFGLQK   RG RVTAMATY+VKLITPSG K ++CPD+ YIL+ AE++G+DLP+SCRAGACS+C GKL SGKVDQ
Subjt:  ITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQ

Query:  SDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS
        S+VSFLD+D IA+GWV+ C+A PLSDVVIET KEEEF++
Subjt:  SDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS

XP_008456215.1 PREDICTED: ferredoxin-like [Cucumis melo]6.6e-4871.22Show/hide
Query:  ITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQ
        ITTTSFL  Q    TLR  PNVGE LFGLQK   RG RVTAMATY+VKLITPSG K ++CPD+ YIL+ AE++G+DLP+SCRAGACS+C GKL SGKVDQ
Subjt:  ITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQ

Query:  SDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS
        S++SFLD+DQIA+GWV+ C+A PLSDVVIET KEEEF++
Subjt:  SDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS

XP_022136605.1 ferredoxin-2-like [Momordica charantia]7.8e-4976.87Show/hide
Query:  TSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQSDV
        TSFL +  P    R V NVGE LFGLQKG SR GRVTAMATY+VKLITPSGEKVV+C D++YILDAAE  G++LP SCRAGACS+CVGKLKSGK+DQSDV
Subjt:  TSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQSDV

Query:  SFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEF
        SFLDEDQI +GWVLTCLA+P+SDVVIET K EEF
Subjt:  SFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEF

TrEMBL top hitse value%identityAlignment
A0A1S3C2Q0 Ferredoxin3.2e-4871.22Show/hide
Query:  ITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQ
        ITTTSFL  Q    TLR  PNVGE LFGLQK   RG RVTAMATY+VKLITPSG K ++CPD+ YIL+ AE++G+DLP+SCRAGACS+C GKL SGKVDQ
Subjt:  ITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQ

Query:  SDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS
        S++SFLD+DQIA+GWV+ C+A PLSDVVIET KEEEF++
Subjt:  SDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS

A0A5A7TC46 Ferredoxin3.2e-4871.22Show/hide
Query:  ITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQ
        ITTTSFL  Q    TLR  PNVGE LFGLQK   RG RVTAMATY+VKLITPSG K ++CPD+ YIL+ AE++G+DLP+SCRAGACS+C GKL SGKVDQ
Subjt:  ITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQ

Query:  SDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS
        S++SFLD+DQIA+GWV+ C+A PLSDVVIET KEEEF++
Subjt:  SDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS

A0A5D3CLT7 Ferredoxin9.3e-4871.22Show/hide
Query:  ITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQ
        ITTTSFL  Q    TLR  PNVGE LFGLQK   RG RVTAMATY+VKLITPSG K ++CPD+ YIL+ AE++G+DLP+SCRAGACS+C GKL SGKVDQ
Subjt:  ITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQ

Query:  SDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS
        S+VSFLD+D IA+GWV+ C+A PLSDVVIET KEEEF++
Subjt:  SDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS

A0A6J1C4E2 Ferredoxin3.8e-4976.87Show/hide
Query:  TSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQSDV
        TSFL +  P    R V NVGE LFGLQKG SR GRVTAMATY+VKLITPSGEKVV+C D++YILDAAE  G++LP SCRAGACS+CVGKLKSGK+DQSDV
Subjt:  TSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQSDV

Query:  SFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEF
        SFLDEDQI +GWVLTCLA+P+SDVVIET K EEF
Subjt:  SFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEF

A0A7J6EFD8 Ferredoxin2.7e-4766.9Show/hide
Query:  ASLITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGK
        ++ + +TSF+  QP A +LR VPNVG+ LFG  K  SRGGRVTAMA Y+VKLITP G+  +ECPD+ Y+LD AE+ GIDLP+SCRAGACS+C+GK+  GK
Subjt:  ASLITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGK

Query:  VDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS
        VDQSD SFLD+DQ+A+GWVLTC+A PLSDVVIET KEEEF++
Subjt:  VDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS

SwissProt top hitse value%identityAlignment
O04090 Ferredoxin-1, chloroplastic9.6e-4259.29Show/hide
Query:  MASLITTTSFLWSQPPAATLRLVPNVG-ERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKS
        ++S I +TSFL  Q    +LR +P    + LFGL+   +RGGRVTAMATY+VK ITP GE+ VEC ++ Y+LDAAE  G+DLP+SCRAG+CS+C GK+ S
Subjt:  MASLITTTSFLWSQPPAATLRLVPNVG-ERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKS

Query:  GKVDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEE
        G +DQSD SFLD++Q+++G+VLTC+A P SDVVIET KEE
Subjt:  GKVDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEE

O04683 Ferredoxin-1, chloroplastic8.2e-4160.58Show/hide
Query:  TTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQSD
        +T+F    PP  T  L  NVG  LFGL+   SR GRVTAMA Y+V L+TP G++ +ECPD+ YILDAAE  GIDLP+SCRAG+CS+C GK+ SG V+Q D
Subjt:  TTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQSD

Query:  VSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS
         SFLD+DQI +GWVLTC+A P  DV IET KEEE ++
Subjt:  VSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS

P16972 Ferredoxin-2, chloroplastic8.7e-4360.99Show/hide
Query:  MASLITTTSFLWSQPPAATLRLVPNVG-ERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKS
        ++S I  TSF+   P   +LR +P+   + LFGL+ G +RGGRVTAMATY+VK ITP GE  VEC D+ Y+LDAAE  GIDLP+SCRAG+CS+C GK+ S
Subjt:  MASLITTTSFLWSQPPAATLRLVPNVG-ERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKS

Query:  GKVDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEE
        G VDQSD SFLD++QI +G+VLTC A P SDV IET KEE+
Subjt:  GKVDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEE

Q43517 Ferredoxin-1, chloroplastic8.2e-4157.34Show/hide
Query:  MASLITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSG
        ++  + +TSFL  +P   +L+ + NVGE LFGL+ G  R GR+T MA+Y+VKLITP G    ECPD+ YILD AE +G DLP+SCRAG+CS+C GK+ +G
Subjt:  MASLITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSG

Query:  KVDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS
         VDQSD +FLDEDQ A G+VLTC+A P  DV IET KEEE ++
Subjt:  KVDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS

Q9ZTS2 Ferredoxin, chloroplastic1.1e-4056.43Show/hide
Query:  MASLITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSG
        +++ + +TSF+  +P   +L+ +PNVGE LFGL+   + GG+VT MA+Y+VKLITP G    +CPDN YILD AE  G DLP+SCRAG+CS+C GK+  G
Subjt:  MASLITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSG

Query:  KVDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEE
         VDQ+D +FLD+DQ+ +GWVLTC+A P SDV IET KE E
Subjt:  KVDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEE

Arabidopsis top hitse value%identityAlignment
AT1G10960.1 ferredoxin 16.9e-4359.29Show/hide
Query:  MASLITTTSFLWSQPPAATLRLVPNVG-ERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKS
        ++S I +TSFL  Q    +LR +P    + LFGL+   +RGGRVTAMATY+VK ITP GE+ VEC ++ Y+LDAAE  G+DLP+SCRAG+CS+C GK+ S
Subjt:  MASLITTTSFLWSQPPAATLRLVPNVG-ERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKS

Query:  GKVDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEE
        G +DQSD SFLD++Q+++G+VLTC+A P SDVVIET KEE
Subjt:  GKVDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEE

AT1G32550.1 2Fe-2S ferredoxin-like superfamily protein1.5e-1339.74Show/hide
Query:  ECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEE
        E P+++YIL +AE+  I LPF+CR G C++C  ++KSG++ Q     +  +  +QG+ L C+  P SD+ +ET  E+E
Subjt:  ECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEE

AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein6.2e-4460.99Show/hide
Query:  MASLITTTSFLWSQPPAATLRLVPNVG-ERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKS
        ++S I  TSF+   P   +LR +P+   + LFGL+ G +RGGRVTAMATY+VK ITP GE  VEC D+ Y+LDAAE  GIDLP+SCRAG+CS+C GK+ S
Subjt:  MASLITTTSFLWSQPPAATLRLVPNVG-ERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKS

Query:  GKVDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEE
        G VDQSD SFLD++QI +G+VLTC A P SDV IET KEE+
Subjt:  GKVDQSDVSFLDEDQIAQGWVLTCLATPLSDVVIETDKEEE

AT2G27510.1 ferredoxin 31.3e-2855.75Show/hide
Query:  RLFGLQKGGSRGGRVTAMATYEVKLITPSG-EKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQSDVSFLDEDQIAQGWVLTCLATP
        R FGL+   + GG  T  A Y+VKL+ P G E   E  D++YILDAAE  G+DLP+SCRAGACS C G++ SG VDQSD SFL++  + +G+VLTC+A P
Subjt:  RLFGLQKGGSRGGRVTAMATYEVKLITPSG-EKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQSDVSFLDEDQIAQGWVLTCLATP

Query:  LSDVVIETDKEEE
         SD VI T KE E
Subjt:  LSDVVIETDKEEE

AT5G10000.1 ferredoxin 43.8e-2549.55Show/hide
Query:  FGLQKGGSRGGRVTAMATYEVKLITPSG-EKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQSDVSFLDEDQIAQGWVLTCLATPLS
        FGL       G+V A  + +VKLI+P G E+ +E  ++  IL++AEN G++LP+SCR+G C  C GKL SGKVDQS  SFL+E+QI +G++LTC+A PL 
Subjt:  FGLQKGGSRGGRVTAMATYEVKLITPSG-EKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQSDVSFLDEDQIAQGWVLTCLATPLS

Query:  DVVIETDKEEE
        D V+ T K+ +
Subjt:  DVVIETDKEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGCCTCATCACCACCACTTCCTTCCTCTGGTCCCAGCCACCGGCCGCGACGTTGAGGCTGGTGCCTAATGTGGGTGAGCGCTTGTTCGGGTTGCAGAAGGGAGG
GAGCCGAGGCGGGCGAGTGACGGCGATGGCAACATACGAGGTGAAGCTAATAACACCAAGTGGAGAGAAAGTTGTCGAGTGTCCGGATAACGAGTACATTCTAGATGCGG
CGGAGAACGATGGGATCGACCTTCCATTCTCATGTAGAGCAGGAGCATGTTCTGCTTGTGTAGGAAAATTGAAATCAGGGAAAGTGGATCAGTCAGATGTTAGCTTCCTT
GATGAAGATCAGATTGCACAAGGCTGGGTTCTTACTTGTTTGGCTACTCCTCTCTCTGATGTTGTTATTGAGACAGATAAGGAGGAGGAATTTTCAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGCCTCATCACCACCACTTCCTTCCTCTGGTCCCAGCCACCGGCCGCGACGTTGAGGCTGGTGCCTAATGTGGGTGAGCGCTTGTTCGGGTTGCAGAAGGGAGG
GAGCCGAGGCGGGCGAGTGACGGCGATGGCAACATACGAGGTGAAGCTAATAACACCAAGTGGAGAGAAAGTTGTCGAGTGTCCGGATAACGAGTACATTCTAGATGCGG
CGGAGAACGATGGGATCGACCTTCCATTCTCATGTAGAGCAGGAGCATGTTCTGCTTGTGTAGGAAAATTGAAATCAGGGAAAGTGGATCAGTCAGATGTTAGCTTCCTT
GATGAAGATCAGATTGCACAAGGCTGGGTTCTTACTTGTTTGGCTACTCCTCTCTCTGATGTTGTTATTGAGACAGATAAGGAGGAGGAATTTTCAAGTTAA
Protein sequenceShow/hide protein sequence
MASLITTTSFLWSQPPAATLRLVPNVGERLFGLQKGGSRGGRVTAMATYEVKLITPSGEKVVECPDNEYILDAAENDGIDLPFSCRAGACSACVGKLKSGKVDQSDVSFL
DEDQIAQGWVLTCLATPLSDVVIETDKEEEFSS