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HG10011085 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011085
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionFerredoxin
Genome locationChr01:2258190..2258483
RNA-Seq ExpressionHG10011085
SyntenyHG10011085
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0010008 - endosome membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR001041 - 2Fe-2S ferredoxin-type iron-sulfur binding domain
IPR006058 - 2Fe-2S ferredoxin, iron-sulphur binding site
IPR010241 - Ferredoxin [2Fe-2S], plant
IPR012675 - Beta-grasp domain superfamily
IPR036010 - 2Fe-2S ferredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_060875669.1 2Fe-2S iron-sulfur cluster binding domain-containing protein [Myroides odoratus]1.9e-4692.78Show/hide
Query:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG
        MAYKVTLITPDGEKSITCSGDDYILDAAEE+G+DLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDD+QMA+GWVLTCVARPESDLVIETHKE+ F+G
Subjt:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG

XP_008456052.1 PREDICTED: ferredoxin-like [Cucumis melo]1.2e-4084.54Show/hide
Query:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG
        MAY V LITP+GEKSITC  D YILDAAEENG+DLPYSCRAGACSSCIGKV SGKLDQSD SFLDDDQ+A+GWVLTCVAR ESD+VIETHKED F+G
Subjt:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG

XP_022136604.1 ferredoxin-like [Momordica charantia]1.6e-4083.51Show/hide
Query:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG
        MAYKVTLITP GEKS+ C  D YILDAAEE+GLDLPYSCRAGACSSC+GKV SGK+DQSDNSFLDDDQMA+GWVLTCVA P+SD+VIETHKE  FSG
Subjt:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG

XP_022941964.1 ferredoxin-like [Cucurbita moschata]4.8e-4285.42Show/hide
Query:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFS
        MAYKV LITP+GEK I CSGDDYILDAAEE+G+DLPYSCRAGACSSCIGK+KSGK+DQSDNSFLDD QM DGWVLTCVARPESD+VIETHKE+ F+
Subjt:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFS

XP_038905955.1 ferredoxin-like [Benincasa hispida]3.7e-4286.6Show/hide
Query:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG
        MAY +TLITP+GEKSITC+ D YILDAAEE GLDLPYSCRAGACSSC+GKV SG LDQSDNSFLDDDQMA GWVLTCVARPESDLVIETHKED F+G
Subjt:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG

TrEMBL top hitse value%identityAlignment
A0A1S3C1X0 Ferredoxin5.7e-4184.54Show/hide
Query:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG
        MAY V LITP+GEKSITC  D YILDAAEENG+DLPYSCRAGACSSCIGKV SGKLDQSD SFLDDDQ+A+GWVLTCVAR ESD+VIETHKED F+G
Subjt:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG

A0A5A7TBH5 Ferredoxin5.7e-4184.54Show/hide
Query:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG
        MAY V LITP+GEKSITC  D YILDAAEENG+DLPYSCRAGACSSCIGKV SGKLDQSD SFLDDDQ+A+GWVLTCVAR ESD+VIETHKED F+G
Subjt:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG

A0A6J1C4S7 Ferredoxin7.5e-4183.51Show/hide
Query:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG
        MAYKVTLITP GEKS+ C  D YILDAAEE+GLDLPYSCRAGACSSC+GKV SGK+DQSDNSFLDDDQMA+GWVLTCVA P+SD+VIETHKE  FSG
Subjt:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG

A0A6J1FPZ2 Ferredoxin2.3e-4285.42Show/hide
Query:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFS
        MAYKV LITP+GEK I CSGDDYILDAAEE+G+DLPYSCRAGACSSCIGK+KSGK+DQSDNSFLDD QM DGWVLTCVARPESD+VIETHKE+ F+
Subjt:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFS

A0A6J1J1D5 Ferredoxin2.3e-4285.42Show/hide
Query:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFS
        MAYKV LITP+GEK I CSGDDYILDAAEE+G+DLPYSCRAGACSSCIGK+KSGK+DQSDNSFLDD QM DGWVLTCVARPESD+VIETHKE+ F+
Subjt:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFS

SwissProt top hitse value%identityAlignment
O04090 Ferredoxin-1, chloroplastic1.3e-3471.74Show/hide
Query:  YKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDA
        YKV  ITP+GE+ + C  D Y+LDAAEE GLDLPYSCRAG+CSSC GKV SG +DQSD SFLDD+QM++G+VLTCVA P SD+VIETHKE+A
Subjt:  YKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDA

P00224 Ferredoxin-22.3e-3470.33Show/hide
Query:  YKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKED
        YKVTL+TP G + I C  D+YILDAAEE G+DLPYSCRAGACSSC GKV SG +DQSD SFL+D QM +GWVLTC+A P  D+ IETHKE+
Subjt:  YKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKED

P00232 Ferredoxin-22.9e-3467.37Show/hide
Query:  AYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFS
        +YKVT +TP G K+ITC  D Y+LDAAE+ GLDLPYSCRAGACSSC GKV +G ++Q D SFLD++QM  GWVLTCVA P SD+ IETHKE+  S
Subjt:  AYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFS

P07839 Ferredoxin, chloroplastic3.8e-3472.34Show/hide
Query:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDA
        MAYKVTL TP G+K+I C  D YILDAAEE GLDLPYSCRAGACSSC GKV +G +DQSD SFLDD QM +G+VLTCVA P SD  I+TH+E+A
Subjt:  MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDA

P83583 Ferredoxin5.0e-3469.47Show/hide
Query:  YKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG
        YKV LITP+G     C  D YILD+AEENG DLPYSCRAGACSSC GK+ +G +DQSDNSFLDDDQ+A+G+VLTCVA P+S++ IETHKED   G
Subjt:  YKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG

Arabidopsis top hitse value%identityAlignment
AT1G10960.1 ferredoxin 19.4e-3671.74Show/hide
Query:  YKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDA
        YKV  ITP+GE+ + C  D Y+LDAAEE GLDLPYSCRAG+CSSC GKV SG +DQSD SFLDD+QM++G+VLTCVA P SD+VIETHKE+A
Subjt:  YKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDA

AT1G32550.1 2Fe-2S ferredoxin-like superfamily protein8.5e-1343.84Show/hide
Query:  DDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKED
        D YIL +AE   + LP++CR G C+SC  +VKSG+L Q     +  +  + G+ L CV  P SDL +ET  ED
Subjt:  DDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKED

AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein4.4e-3367.03Show/hide
Query:  YKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKED
        YKV  ITP+GE  + C  D Y+LDAAEE G+DLPYSCRAG+CSSC GKV SG +DQSD SFLDD+Q+ +G+VLTC A P SD+ IETHKE+
Subjt:  YKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKED

AT2G27510.1 ferredoxin 31.1e-2863.74Show/hide
Query:  YKVTLITPDG-EKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKE
        YKV L+ PDG E       D YILDAAEE G+DLPYSCRAGACS+C G++ SG +DQSD SFL+D  +  G+VLTCVA P+SD VI THKE
Subjt:  YKVTLITPDG-EKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKE

AT5G10000.1 ferredoxin 44.5e-2252.22Show/hide
Query:  KVTLITPDG-EKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKE
        KV LI+P+G E+ I  + D  IL++AE  GL+LPYSCR+G C +C GK+ SGK+DQS  SFL+++Q+  G++LTC+A P  D V+ THK+
Subjt:  KVTLITPDG-EKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTACAAGGTGACCCTCATAACCCCAGATGGAGAGAAATCGATTACATGTAGTGGTGATGATTACATTTTAGATGCGGCTGAGGAAAACGGGCTTGATCTTCCTTA
CTCTTGCAGAGCTGGGGCTTGTTCTTCTTGCATTGGCAAAGTGAAATCAGGGAAATTAGATCAATCTGATAATAGTTTTCTTGATGATGATCAAATGGCTGATGGTTGGG
TTTTAACTTGTGTTGCTAGGCCTGAATCTGATCTTGTAATTGAGACCCACAAGGAAGATGCATTTTCTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTACAAGGTGACCCTCATAACCCCAGATGGAGAGAAATCGATTACATGTAGTGGTGATGATTACATTTTAGATGCGGCTGAGGAAAACGGGCTTGATCTTCCTTA
CTCTTGCAGAGCTGGGGCTTGTTCTTCTTGCATTGGCAAAGTGAAATCAGGGAAATTAGATCAATCTGATAATAGTTTTCTTGATGATGATCAAATGGCTGATGGTTGGG
TTTTAACTTGTGTTGCTAGGCCTGAATCTGATCTTGTAATTGAGACCCACAAGGAAGATGCATTTTCTGGTTAA
Protein sequenceShow/hide protein sequence
MAYKVTLITPDGEKSITCSGDDYILDAAEENGLDLPYSCRAGACSSCIGKVKSGKLDQSDNSFLDDDQMADGWVLTCVARPESDLVIETHKEDAFSG