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HG10011104 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011104
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionribosome-inactivating protein SNAIf-like
Genome locationChr01:2486762..2487010
RNA-Seq ExpressionHG10011104
SyntenyHG10011104
Gene Ontology termsNA
InterPro domainsIPR000772 - Ricin B, lectin domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149256.1 ribosome-inactivating protein SNAIf-like [Momordica charantia]1.0e-0569.7Show/hide
Query:  IGRDGLCLDSDGPSRYNFPKLVPCKAEAKTQLW
        +G+DGLCLDSDG SRYNFPKLVPC  + + Q+W
Subjt:  IGRDGLCLDSDGPSRYNFPKLVPCKAEAKTQLW
TrEMBL top hitse value%identityAlignment
A0A6J1D7U5 ribosome-inactivating protein SNAIf-like5.1e-0669.7Show/hide
Query:  IGRDGLCLDSDGPSRYNFPKLVPCKAEAKTQLW
        +G+DGLCLDSDG SRYNFPKLVPC  + + Q+W
Subjt:  IGRDGLCLDSDGPSRYNFPKLVPCKAEAKTQLW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGACATGAAGAAGACGAGAGAAATTATTATGAGAGTGTTTGTTATTGTTGTGGCTGTTATTTCACTCGTCGGCCACCGCGTCACAGCGACGGGCCAACTCAAAAC
ACATCTAATTGGTCGAGATGGACTATGTTTAGACAGCGATGGGCCGAGTCGCTACAACTTCCCAAAACTAGTGCCATGCAAGGCCGAGGCCAAGACCCAACTATGGATTC
CCCAACGATGGCACGATCCGTTGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGACATGAAGAAGACGAGAGAAATTATTATGAGAGTGTTTGTTATTGTTGTGGCTGTTATTTCACTCGTCGGCCACCGCGTCACAGCGACGGGCCAACTCAAAAC
ACATCTAATTGGTCGAGATGGACTATGTTTAGACAGCGATGGGCCGAGTCGCTACAACTTCCCAAAACTAGTGCCATGCAAGGCCGAGGCCAAGACCCAACTATGGATTC
CCCAACGATGGCACGATCCGTTGGACTGA
Protein sequenceShow/hide protein sequence
MVDMKKTREIIMRVFVIVVAVISLVGHRVTATGQLKTHLIGRDGLCLDSDGPSRYNFPKLVPCKAEAKTQLWIPQRWHDPLD