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HG10011122 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011122
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTubby-like F-box protein 8
Genome locationChr01:2627177..2628172
RNA-Seq ExpressionHG10011122
SyntenyHG10011122
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650509.1 hypothetical protein Csa_010751 [Cucumis sativus]3.6e-1376.56Show/hide
Query:  MEKSAAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGPG
        ME+S A AILC LLLS A VTVSADAADCIDGCFTACVQKD     +R MQRCE KC IKCGPG
Subjt:  MEKSAAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGPG

KAG6600340.1 hypothetical protein SDJN03_05573, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1674.29Show/hide
Query:  MEKSAAA---AILCFLLLSAAAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGPGINY
        M+KS AA   AILCF+LLSAAA TVSADAADCIDGCFTACVQKD      RLMQRCEGKC+IKCGP   +
Subjt:  MEKSAAA---AILCFLLLSAAAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGPGINY

KYP63130.1 Tubby-like F-box protein 8 [Cajanus cajan]1.2e-0858.06Show/hide
Query:  KSAAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGPG
        K   AAI+  L++S+   +V  DA DCIDGC TACVQ+D     +RL  RCEGKCKIKCGPG
Subjt:  KSAAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGPG

XP_008456107.1 PREDICTED: uncharacterized protein LOC103496144 isoform X2 [Cucumis melo]1.5e-1478.79Show/hide
Query:  MEKS--AAAAILCFLLLSA-AAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGP
        MEKS  AAAAILC LLLSA A VTVSADAADCID CFTACVQKD      R+MQRCEGKC+IKCGP
Subjt:  MEKS--AAAAILCFLLLSA-AAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGP

XP_016901882.1 PREDICTED: uncharacterized protein LOC103496144 isoform X1 [Cucumis melo]1.9e-1781.43Show/hide
Query:  MEKS--AAAAILCFLLLSA-AAVTVSADAADCIDGCFTACVQKDIG----CGAARLMQRCEGKCKIKCGP
        MEKS  AAAAILC LLLSA A VTVSADAADCID CFTACVQKD G    CGAAR+MQRCEGKC+IKCGP
Subjt:  MEKS--AAAAILCFLLLSA-AAVTVSADAADCIDGCFTACVQKDIG----CGAARLMQRCEGKCKIKCGP

TrEMBL top hitse value%identityAlignment
A0A0A0LC00 Uncharacterized protein8.7e-1376.19Show/hide
Query:  MEKSAAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGP
        ME+S A AILC LLLS A VTVSADAADCIDGCFTACVQKD     +R MQRCE KC IKCGP
Subjt:  MEKSAAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGP

A0A0L9VG55 Uncharacterized protein2.2e-0853.85Show/hide
Query:  KSAAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGPGINY
        K   AA + FLL+++   +V  DAADC+DGC TACVQ+D     +RL QRCE KC I+CGPG N+
Subjt:  KSAAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGPGINY

A0A151T7U7 Tubby-like F-box protein5.9e-0958.06Show/hide
Query:  KSAAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGPG
        K   AAI+  L++S+   +V  DA DCIDGC TACVQ+D     +RL  RCEGKCKIKCGPG
Subjt:  KSAAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGPG

A0A1S3C2J8 uncharacterized protein LOC103496144 isoform X27.1e-1578.79Show/hide
Query:  MEKS--AAAAILCFLLLSA-AAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGP
        MEKS  AAAAILC LLLSA A VTVSADAADCID CFTACVQKD      R+MQRCEGKC+IKCGP
Subjt:  MEKS--AAAAILCFLLLSA-AAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGP

A0A1S4E0W4 uncharacterized protein LOC103496144 isoform X19.0e-1881.43Show/hide
Query:  MEKS--AAAAILCFLLLSA-AAVTVSADAADCIDGCFTACVQKDIG----CGAARLMQRCEGKCKIKCGP
        MEKS  AAAAILC LLLSA A VTVSADAADCID CFTACVQKD G    CGAAR+MQRCEGKC+IKCGP
Subjt:  MEKS--AAAAILCFLLLSA-AAVTVSADAADCIDGCFTACVQKDIG----CGAARLMQRCEGKCKIKCGP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G25275.1 unknown protein1.9e-0441.67Show/hide
Query:  AAAILCFLLLSAAAVTVSAD--AADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGP
        AA ++   L S+  +   A     DC DGC TACVQ+D      R   RC+ KC I+CGP
Subjt:  AAAILCFLLLSAAAVTVSAD--AADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGP

AT1G25275.2 unknown protein7.3e-0440Show/hide
Query:  AAAILCFLLLSAAAVTVSAD--AADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGP
        AA ++   L S+  +   A     DC DGC TACVQ+D          RC+ KC I+CGP
Subjt:  AAAILCFLLLSAAAVTVSAD--AADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGP

AT1G25275.3 unknown protein7.8e-0642.19Show/hide
Query:  AAAILCFLLLSAAAVTVSAD--AADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGPGINY
        AA ++   L S+  +   A     DC DGC TACVQ+D      R   RC+ KC I+CGPG +Y
Subjt:  AAAILCFLLLSAAAVTVSAD--AADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGPGINY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAATCTGCGGCGGCGGCGATTTTGTGCTTCTTGCTACTTTCTGCGGCGGCGGTGACGGTTTCAGCCGACGCTGCCGACTGCATCGACGGCTGTTTCACCGCTTG
TGTCCAGAAAGACATTGGTTGTGGTGCAGCGAGGCTGATGCAGCGTTGTGAGGGCAAGTGTAAAATTAAGTGCGGTCCAGGTATTAATTATTTATTGGAATTAACTTTTA
TAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAATCTGCGGCGGCGGCGATTTTGTGCTTCTTGCTACTTTCTGCGGCGGCGGTGACGGTTTCAGCCGACGCTGCCGACTGCATCGACGGCTGTTTCACCGCTTG
TGTCCAGAAAGACATTGGTTGTGGTGCAGCGAGGCTGATGCAGCGTTGTGAGGGCAAGTGTAAAATTAAGTGCGGTCCAGGTATTAATTATTTATTGGAATTAACTTTTA
TAATTTAA
Protein sequenceShow/hide protein sequence
MEKSAAAAILCFLLLSAAAVTVSADAADCIDGCFTACVQKDIGCGAARLMQRCEGKCKIKCGPGINYLLELTFII