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HG10011133 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011133
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionEKC/KEOPS complex subunit Tprkb
Genome locationChr01:2725912..2726460
RNA-Seq ExpressionHG10011133
SyntenyHG10011133
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsIPR036504 - CGI121/TPRKB superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU31875.1 hypothetical protein TSUD_114860, partial [Trifolium subterraneum]4.2e-1284.78Show/hide
Query:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
        MQAGTLEPEVAFLNASLITESLKRCGIS+S++YVLAA F+A+PDE+
Subjt:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
KAF4374027.1 hypothetical protein F8388_007933 [Cannabis sativa]1.7e-1393.48Show/hide
Query:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
        MQAGTLEPEVAFLNASLITESLKRCGIS+SSSYVLAA FNASPDE+
Subjt:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
KAF4374186.1 hypothetical protein F8388_022952, partial [Cannabis sativa]1.7e-1393.48Show/hide
Query:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
        MQAGTLEPEVAFLNASLITESLKRCGIS+SSSYVLAA FNASPDE+
Subjt:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
KAF4382479.1 hypothetical protein G4B88_011431 [Cannabis sativa]1.7e-1393.48Show/hide
Query:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
        MQAGTLEPEVAFLNASLITESLKRCGIS+SSSYVLAA FNASPDE+
Subjt:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
KAF4398692.1 hypothetical protein G4B88_017118 [Cannabis sativa]1.7e-1393.48Show/hide
Query:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
        MQAGTLEPEVAFLNASLITESLKRCGIS+SSSYVLAA FNASPDE+
Subjt:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
TrEMBL top hitse value%identityAlignment
A0A2Z6N7M4 Uncharacterized protein (Fragment)2.0e-1284.78Show/hide
Query:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
        MQAGTLEPEVAFLNASLITESLKRCGIS+S++YVLAA F+A+PDE+
Subjt:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
A0A7J6FTW7 Uncharacterized protein (Fragment)8.3e-1493.48Show/hide
Query:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
        MQAGTLEPEVAFLNASLITESLKRCGIS+SSSYVLAA FNASPDE+
Subjt:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
A0A7J6FTX4 Uncharacterized protein8.3e-1493.48Show/hide
Query:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
        MQAGTLEPEVAFLNASLITESLKRCGIS+SSSYVLAA FNASPDE+
Subjt:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
A0A7J6GK02 VID27 domain-containing protein8.3e-1493.48Show/hide
Query:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
        MQAGTLEPEVAFLNASLITESLKRCGIS+SSSYVLAA FNASPDE+
Subjt:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
A0A7J6HTW9 Uncharacterized protein8.3e-1493.48Show/hide
Query:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
        MQAGTLEPEVAFLNASLITESLKRCGIS+SSSYVLAA FNASPDE+
Subjt:  MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G34412.1 CONTAINS InterPro DOMAIN/s: Kinase binding protein CGI-121 (InterPro:IPR013926); Has 275 Blast hits to 275 proteins in 139 species: Archae - 0; Bacteria - 5; Metazoa - 98; Fungi - 109; Plants - 42; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).8.2e-0672.41Show/hide
Query:  ITESLKRCGISDSSSYVLAACFNASPDEV
        ITESLKRCGIS++++Y+LAA FNASP E+
Subjt:  ITESLKRCGISDSSSYVLAACFNASPDEV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCTGGAACTCTGGAACCGGAAGTTGCATTTCTCAATGCTTCTCTTATTACAGAGTCTTTAAAAAGATGTGGAATTTCTGATAGCTCCTCGTATGTCCTTGCGGC
TTGTTTTAATGCTTCTCCTGATGAGGTTGGATCAAGATGTCATGCAAAAATAGACTCTGTTACCTTGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCTGGAACTCTGGAACCGGAAGTTGCATTTCTCAATGCTTCTCTTATTACAGAGTCTTTAAAAAGATGTGGAATTTCTGATAGCTCCTCGTATGTCCTTGCGGC
TTGTTTTAATGCTTCTCCTGATGAGGTTGGATCAAGATGTCATGCAAAAATAGACTCTGTTACCTTGTTGTAA
Protein sequenceShow/hide protein sequence
MQAGTLEPEVAFLNASLITESLKRCGISDSSSYVLAACFNASPDEVGSRCHAKIDSVTLL