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HG10011166 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011166
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLYR motif-containing protein At3g19508
Genome locationChr01:3001331..3001676
RNA-Seq ExpressionHG10011166
SyntenyHG10011166
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140718.1 LYR motif-containing protein At3g19508 [Cucumis sativus]1.7e-3592.59Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICY
        MEKALR+YGEVLRLVR+LPKDTRPYYAKY RENFVNYREVDA DAKSLEELFH AYNHS+WVLNKYSVDGSAADKLKEICY
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICY

XP_008456173.1 PREDICTED: LYR motif-containing protein At3g19508 [Cucumis melo]1.4e-3796.34Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS
        MEKALR+YGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFH AYNHS+WVLNKYSVDGSAADKLKEICYS
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS

XP_015892821.1 LYR motif-containing protein At3g19508 [Ziziphus jujuba]8.2e-3589.02Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS
        MEKALRIYGE+LRLVRRLPKDTRPYYAKYARENFVNYREVDAND+ +LEELFH AYNHS+WVLNKYSVD SAADKLKE+CY+
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS

XP_022941949.1 LYR motif-containing protein At3g19508 [Cucurbita moschata]2.8e-3593.9Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS
        MEKALRIY EVLRLVRRLPKD+RPYYAKYARENFVNYREVDANDAKSLEELFH AYNHSVWVLNKYSV+GSAADKLKEIC S
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS

XP_038898400.1 LYR motif-containing protein At3g19508 [Benincasa hispida]1.5e-3695.12Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS
        MEKALRIYGEVLRLVRRLPKD+RPYYAKYARENFVNYREVDANDAKSLEELFH AY HS+WVLNKYSVDGSAADKLKEICYS
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS

TrEMBL top hitse value%identityAlignment
A0A0A0L970 Uncharacterized protein8.0e-3692.59Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICY
        MEKALR+YGEVLRLVR+LPKDTRPYYAKY RENFVNYREVDA DAKSLEELFH AYNHS+WVLNKYSVDGSAADKLKEICY
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICY

A0A1S3C3W4 LYR motif-containing protein At3g195086.6e-3896.34Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS
        MEKALR+YGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFH AYNHS+WVLNKYSVDGSAADKLKEICYS
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS

A0A5A7T6G8 LYR motif-containing protein6.6e-3896.34Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS
        MEKALR+YGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFH AYNHS+WVLNKYSVDGSAADKLKEICYS
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS

A0A6J1FPX9 LYR motif-containing protein At3g195081.4e-3593.9Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS
        MEKALRIY EVLRLVRRLPKD+RPYYAKYARENFVNYREVDANDAKSLEELFH AYNHSVWVLNKYSV+GSAADKLKEIC S
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS

A0A6P4A9N6 LYR motif-containing protein At3g195084.0e-3589.02Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS
        MEKALRIYGE+LRLVRRLPKDTRPYYAKYARENFVNYREVDAND+ +LEELFH AYNHS+WVLNKYSVD SAADKLKE+CY+
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS

SwissProt top hitse value%identityAlignment
A9SNJ1 LYR motif-containing protein PHYPADRAFT_1868639.5e-1053.45Show/hide
Query:  YGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNK
        Y EVL+LV+RLP  +R YYA+YARENFV Y EV+  D +S+  L    ++H+ WVL K
Subjt:  YGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNK

Q1G3M2 LYR motif-containing protein At3g195081.0e-2772.84Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICY
        M+K LR+YG V+RLVR LP D+RPYYAKYARENFVNYREVD ++  SL+ELF  AYNHS+WVL KYS+D SAA KLKEIC+
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICY

Arabidopsis top hitse value%identityAlignment
AT3G19508.1 unknown protein7.2e-2972.84Show/hide
Query:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICY
        M+K LR+YG V+RLVR LP D+RPYYAKYARENFVNYREVD ++  SL+ELF  AYNHS+WVL KYS+D SAA KLKEIC+
Subjt:  MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGCCCTGAGAATATACGGCGAAGTTTTGAGGTTAGTGCGGCGGTTACCTAAGGACACGAGGCCTTACTACGCCAAGTACGCTCGAGAGAATTTCGTCAACTA
CAGAGAAGTCGATGCGAACGATGCCAAATCCCTAGAAGAACTCTTCCACGGAGCTTATAACCACTCCGTTTGGGTTCTAAACAAGTATTCGGTGGATGGATCTGCGGCGG
ATAAGCTGAAGGAGATCTGTTATAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGGCCCTGAGAATATACGGCGAAGTTTTGAGGTTAGTGCGGCGGTTACCTAAGGACACGAGGCCTTACTACGCCAAGTACGCTCGAGAGAATTTCGTCAACTA
CAGAGAAGTCGATGCGAACGATGCCAAATCCCTAGAAGAACTCTTCCACGGAGCTTATAACCACTCCGTTTGGGTTCTAAACAAGTATTCGGTGGATGGATCTGCGGCGG
ATAAGCTGAAGGAGATCTGTTATAGTTAA
Protein sequenceShow/hide protein sequence
MEKALRIYGEVLRLVRRLPKDTRPYYAKYARENFVNYREVDANDAKSLEELFHGAYNHSVWVLNKYSVDGSAADKLKEICYS