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HG10011170 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011170
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionhomeobox protein HAT3.1 isoform X2
Genome locationChr01:3042367..3042726
RNA-Seq ExpressionHG10011170
SyntenyHG10011170
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57486.1 hypothetical protein Csa_010932 [Cucumis sativus]9.8e-1385.71Show/hide
Query:  MIMSGGSGRQTVRVKAGQNAQSNGGPDLEDSETKPLYSLFPLRRHGRTK
        +I SGGSGRQTVRVKA QNAQSNGGPDLEDSETKPLYSLFPLR   RT+
Subjt:  MIMSGGSGRQTVRVKAGQNAQSNGGPDLEDSETKPLYSLFPLRRHGRTK
XP_022149327.1 homeobox protein HAT3.1 isoform X2 [Momordica charantia]2.5e-0878.72Show/hide
Query:  MSGGSGRQTVRVKAGQNAQS-NGGPDLEDSETKPLYSLFPLRRHGRT
        M GGSGRQTVRVKAG+NA + NGGPDLEDSETKPLYSLF LR    T
Subjt:  MSGGSGRQTVRVKAGQNAQS-NGGPDLEDSETKPLYSLFPLRRHGRT
TrEMBL top hitse value%identityAlignment
A0A0A0LBT3 Uncharacterized protein4.8e-1385.71Show/hide
Query:  MIMSGGSGRQTVRVKAGQNAQSNGGPDLEDSETKPLYSLFPLRRHGRTK
        +I SGGSGRQTVRVKA QNAQSNGGPDLEDSETKPLYSLFPLR   RT+
Subjt:  MIMSGGSGRQTVRVKAGQNAQSNGGPDLEDSETKPLYSLFPLRRHGRTK
A0A6J1D7M5 homeobox protein HAT3.1 isoform X21.2e-0878.72Show/hide
Query:  MSGGSGRQTVRVKAGQNAQS-NGGPDLEDSETKPLYSLFPLRRHGRT
        M GGSGRQTVRVKAG+NA + NGGPDLEDSETKPLYSLF LR    T
Subjt:  MSGGSGRQTVRVKAGQNAQS-NGGPDLEDSETKPLYSLFPLRRHGRT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTATGAGCGGCGGTAGCGGAAGGCAGACGGTGCGCGTGAAGGCTGGGCAAAATGCACAGAGTAACGGTGGCCCAGATTTGGAGGACTCTGAGACAAAGCCGCTTTA
TTCTCTCTTCCCGCTGAGAAGACATGGAAGAACCAAGAACAACAACCACCACCACCACCACCACCACCACCATCGCCAAATTTCTTACTCTTTTCTTCCAAAATCTCCAT
TAACAAACATCTCCACCGCCTACAAGATCCAAAAACCACCCTCTTTCTCCGACAATACTATGCTCTTCACCAACACCAGGTACATCTTTCCAATAGGTTTTTTCTTTTTC
TTTTCTATTACCTTCTTCTATTTCTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTATGAGCGGCGGTAGCGGAAGGCAGACGGTGCGCGTGAAGGCTGGGCAAAATGCACAGAGTAACGGTGGCCCAGATTTGGAGGACTCTGAGACAAAGCCGCTTTA
TTCTCTCTTCCCGCTGAGAAGACATGGAAGAACCAAGAACAACAACCACCACCACCACCACCACCACCACCATCGCCAAATTTCTTACTCTTTTCTTCCAAAATCTCCAT
TAACAAACATCTCCACCGCCTACAAGATCCAAAAACCACCCTCTTTCTCCGACAATACTATGCTCTTCACCAACACCAGGTACATCTTTCCAATAGGTTTTTTCTTTTTC
TTTTCTATTACCTTCTTCTATTTCTGCTAG
Protein sequenceShow/hide protein sequence
MIMSGGSGRQTVRVKAGQNAQSNGGPDLEDSETKPLYSLFPLRRHGRTKNNNHHHHHHHHHRQISYSFLPKSPLTNISTAYKIQKPPSFSDNTMLFTNTRYIFPIGFFFF
FSITFFYFC