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HG10011399 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011399
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncystinosin homolog
Genome locationChr01:5628199..5628637
RNA-Seq ExpressionHG10011399
SyntenyHG10011399
Gene Ontology termsGO:0015811 - L-cystine transport (biological process)
GO:0005774 - vacuolar membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015184 - L-cystine transmembrane transporter activity (molecular function)
InterPro domainsIPR006603 - PQ-loop repeat


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PQM40157.1 cystinosin homolog isoform X2 [Prunus yedoensis var. nudiflora]4.2e-1239.25Show/hide
Query:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKR--------------------------IELRLRDSEFHEAIVVFDIQRYSVLQRHCSEAVL
        MASWNS+ +E+ Y+++GW +  CW++  YPQVILNFRRKR                           ELR R +EF +A  +  +QR+ +LQ   S+AVL
Subjt:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKR--------------------------IELRLRDSEFHEAIVVFDIQRYSVLQRHCSEAVL

Query:  RQIRLRS
         +IR+R+
Subjt:  RQIRLRS
XP_038884230.1 cystinosin homolog isoform X1 [Benincasa hispida]2.7e-1185.37Show/hide
Query:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
        M SWNSISMEIIYQ+LGW SIICWALA+YPQVILNFRRK +
Subjt:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
XP_038884260.1 cystinosin homolog isoform X3 [Benincasa hispida]2.7e-1185.37Show/hide
Query:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
        M SWNSISMEIIYQ+LGW SIICWALA+YPQVILNFRRK +
Subjt:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
XP_038884268.1 cystinosin homolog isoform X4 [Benincasa hispida]2.7e-1185.37Show/hide
Query:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
        M SWNSISMEIIYQ+LGW SIICWALA+YPQVILNFRRK +
Subjt:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
XP_038884284.1 cystinosin homolog isoform X6 [Benincasa hispida]2.7e-1185.37Show/hide
Query:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
        M SWNSISMEIIYQ+LGW SIICWALA+YPQVILNFRRK +
Subjt:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
TrEMBL top hitse value%identityAlignment
A0A0A0LB92 Uncharacterized protein1.9e-1078.05Show/hide
Query:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
        M+SWNSISMEI+Y +LGW SI+CWALA+YPQVILNFRRK +
Subjt:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
A0A314URT3 Cystinosin homolog isoform X22.0e-1239.25Show/hide
Query:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKR--------------------------IELRLRDSEFHEAIVVFDIQRYSVLQRHCSEAVL
        MASWNS+ +E+ Y+++GW +  CW++  YPQVILNFRRKR                           ELR R +EF +A  +  +QR+ +LQ   S+AVL
Subjt:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKR--------------------------IELRLRDSEFHEAIVVFDIQRYSVLQRHCSEAVL

Query:  RQIRLRS
         +IR+R+
Subjt:  RQIRLRS
A0A5D3E357 Cystinosin-like protein isoform X14.7e-0968.29Show/hide
Query:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
        M SWNSI ME++YQ+LGW SIICWA + YPQ++LNFRRK +
Subjt:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
A0A6J1DN06 cystinosin homolog2.5e-1073.17Show/hide
Query:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
        MASWNS+ +EI+Y++LGWSSIICW +A YPQVILNFRRK +
Subjt:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
A0A6J1EJ63 cystinosin homolog2.5e-1075.61Show/hide
Query:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
        MASWNS+ MEI+YQ+LGWS+IICWALA+YPQ+ILNF RK +
Subjt:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
SwissProt top hitse value%identityAlignment
P57758 Cystinosin homolog6.6e-0856.1Show/hide
Query:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
        MASWNSI +EI Y+I+GW +   W+++ YPQ+ILNFRR+ +
Subjt:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
Q54WT7 Cystinosin homolog5.7e-0452.94Show/hide
Query:  SMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
        ++ II  I+GW    CW+L+ YPQVILNFR+K +
Subjt:  SMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
Arabidopsis top hitse value%identityAlignment
AT5G40670.1 PQ-loop repeat family protein / transmembrane family protein4.7e-0956.1Show/hide
Query:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI
        MASWNSI +EI Y+I+GW +   W+++ YPQ+ILNFRR+ +
Subjt:  MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCATGGAATTCAATTTCAATGGAGATCATATACCAGATTTTAGGATGGAGTTCCATCATATGCTGGGCGCTTGCTGCATATCCACAGGTCATTCTGAATTTCCG
GCGAAAAAGGATTGAGCTTCGATTACGTGATTCTGAATTTCACGAAGCAATCGTCGTATTTGATATACAACGCTACTCTGTTCTTCAGCGCCACTGTTCAGAGGCAGTAC
TTCGACAAATACGGCTACGATCAGGTTGGCCTTCTTCTTTCTTCCTTCCACTTCTCTTCAGATTTTTGTTTCAATACATTGCGATTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCATGGAATTCAATTTCAATGGAGATCATATACCAGATTTTAGGATGGAGTTCCATCATATGCTGGGCGCTTGCTGCATATCCACAGGTCATTCTGAATTTCCG
GCGAAAAAGGATTGAGCTTCGATTACGTGATTCTGAATTTCACGAAGCAATCGTCGTATTTGATATACAACGCTACTCTGTTCTTCAGCGCCACTGTTCAGAGGCAGTAC
TTCGACAAATACGGCTACGATCAGGTTGGCCTTCTTCTTTCTTCCTTCCACTTCTCTTCAGATTTTTGTTTCAATACATTGCGATTCGTTGA
Protein sequenceShow/hide protein sequence
MASWNSISMEIIYQILGWSSIICWALAAYPQVILNFRRKRIELRLRDSEFHEAIVVFDIQRYSVLQRHCSEAVLRQIRLRSGWPSSFFLPLLFRFLFQYIAIR