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HG10011404 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011404
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationChr01:5719976..5720710
RNA-Seq ExpressionHG10011404
SyntenyHG10011404
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066959.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa]1.9e-2589.86Show/hide
Query:  NSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPMGVMVV
        +SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK+NTSR EENYQYSPM ++ V
Subjt:  NSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPMGVMVV
KAG6581070.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]7.4e-2596.72Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPM
        D+GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNN SRPEENYQYSPM
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPM
KAG7017799.1 RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-2593.65Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPM
        + D+GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNN SRPEENYQYSPM
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPM
XP_038883812.1 protein NOI4-like isoform X1 [Benincasa hispida]6.7e-2698.39Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPM
        QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNT AKNNTSRPEENYQYSPM
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPM
XP_038883820.1 protein NOI4-like isoform X2 [Benincasa hispida]6.7e-2698.39Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPM
        QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNT AKNNTSRPEENYQYSPM
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPM
TrEMBL top hitse value%identityAlignment
A0A0A0LDP9 AvrRpt-cleavage domain-containing protein1.0e-2493.65Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPM
        + DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK+NTSR EENYQYSPM
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPM
A0A5D3E371 RPM1-interacting protein 4-like9.4e-2689.86Show/hide
Query:  NSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPMGVMVV
        +SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK+NTSR EENYQYSPM ++ V
Subjt:  NSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEENYQYSPMGVMVV
A0A5J5AK52 AvrRpt-cleavage domain-containing protein2.7e-1775.76Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA--PGNTAAKN-NTSRPEENYQYSPM
        SQDKGRPLPKFGEWDVNNPASA+GFTVIF+KARD+KK+N A  PG  + KN NTS+  ENYQY PM
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA--PGNTAAKN-NTSRPEENYQYSPM
A0A5J5BYY8 AvrRpt-cleavage domain-containing protein2.3e-1667.61Show/hide
Query:  NSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA-------PGNTAAKNNTSRPEENYQYSPM
        +SQDKGRPLPKFGEWDVNNPASA+GFTVIF+KARD+KK+N A        G    KN+ S+  ENYQYSPM
Subjt:  NSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA-------PGNTAAKNNTSRPEENYQYSPM
B9SLS6 NOI, putative4.0e-1676.19Show/hide
Query:  NSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAA---KNNTSRPEENYQ
        ++QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN A G  AA    NN  +P++NYQ
Subjt:  NSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAA---KNNTSRPEENYQ
SwissProt top hitse value%identityAlignment
O22633 Protein NOI42.3e-1383.33Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
        DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
Q8GYN5 RPM1-interacting protein 45.2e-0540.28Show/hide
Query:  PFKSNGRTDKHENSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKS--NEAPGNTAAKNNTSRPEEN
        P  +N R D+   S +K   +PKFG+WD NNP+SA+G+T IF+K R+E+ S  N +  +    + +SR   N
Subjt:  PFKSNGRTDKHENSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKS--NEAPGNTAAKNNTSRPEEN
Arabidopsis top hitse value%identityAlignment
AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein6.9e-1362.3Show/hide
Query:  HENSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK---NNTSRPE
        ++  Q + RPLPKFGEWDVN+PASAEGFTVIF+KARD+KK+N A G  A++   NN S+ E
Subjt:  HENSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAK---NNTSRPE
AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein1.6e-1483.33Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
        DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein1.3e-1481.4Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
        +DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein1.3e-1481.4Show/hide
Query:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
        +DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+   PG+
Subjt:  QDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGN
AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein1.6e-1466.67Show/hide
Query:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEEN
        +++KG+PLPKFGEWDVNNPASAEGFTVIFSKA DEKK+ +A G  A  N+   P+ N
Subjt:  SQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSRPEEN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCCTTGTTTGATATTGATACCGACATCAGCAGAAAATATTTCATTGCTTTCTCACAGAAATGCATGGCCAGAAGCAAATACAAGATAGGCAGAGATCTACACAT
AAACAAGGAACATTCAAAGTTCCCTTTTAAAAGCAATGGAAGAACTGACAAACATGAGAATTCACAAGATAAAGGTCGCCCCTTGCCGAAGTTCGGCGAGTGGGATGTCA
ACAACCCAGCCTCCGCCGAAGGATTTACAGTAATATTTAGCAAAGCTAGAGATGAGAAGAAGTCAAATGAGGCTCCTGGGAACACAGCAGCCAAAAACAATACATCCAGA
CCAGAGGAGAATTATCAATATTCTCCCATGGGAGTGATGGTGGTGGTGACAACAGACATGGTGAAAGAAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGCCTTGTTTGATATTGATACCGACATCAGCAGAAAATATTTCATTGCTTTCTCACAGAAATGCATGGCCAGAAGCAAATACAAGATAGGCAGAGATCTACACAT
AAACAAGGAACATTCAAAGTTCCCTTTTAAAAGCAATGGAAGAACTGACAAACATGAGAATTCACAAGATAAAGGTCGCCCCTTGCCGAAGTTCGGCGAGTGGGATGTCA
ACAACCCAGCCTCCGCCGAAGGATTTACAGTAATATTTAGCAAAGCTAGAGATGAGAAGAAGTCAAATGAGGCTCCTGGGAACACAGCAGCCAAAAACAATACATCCAGA
CCAGAGGAGAATTATCAATATTCTCCCATGGGAGTGATGGTGGTGGTGACAACAGACATGGTGAAAGAAGGCTGA
Protein sequenceShow/hide protein sequence
MPALFDIDTDISRKYFIAFSQKCMARSKYKIGRDLHINKEHSKFPFKSNGRTDKHENSQDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTAAKNNTSR
PEENYQYSPMGVMVVVTTDMVKEG