; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10011408 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011408
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionmucin-1
Genome locationChr01:5751392..5751946
RNA-Seq ExpressionHG10011408
SyntenyHG10011408
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066977.1 mucin-1 [Cucumis melo var. makuwa]1.7e-4876.68Show/hide
Query:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASFE-SSPSPKASAP-SSSSEAPTSESPTSSPKSSPSVSPSPA
        MASQSV+VFALIF+AAVAGVFA+APTESPS SPSPKASPSDS+SPSP+SSSPA SPKAS E +SPSP AS+P SSSS+APTS+SPTSSPKSSPSVSPSPA
Subjt:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASFE-SSPSPKASAP-SSSSEAPTSESPTSSPKSSPSVSPSPA

Query:  TDSP-----ADSPADSNADTPTAASPDTDVSSPPSPNAADGP-VADGPF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF
        TDSP     ADSPAD+ ADTPTAASPD+DVSSPPSP+AAD P  ADGP  ADGP ADSPADSPAG  +S  + LK+TSAV GG +A  G +AF
Subjt:  TDSP-----ADSPADSNADTPTAASPDTDVSSPPSPNAADGP-VADGPF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF

XP_008450043.1 PREDICTED: mucin-1 [Cucumis melo]1.7e-4876.68Show/hide
Query:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASFE-SSPSPKASAP-SSSSEAPTSESPTSSPKSSPSVSPSPA
        MASQSV+VFALIF+AAVAGVFA+APTESPS SPSPKASPSDS+SPSP+SSSPA SPKAS E +SPSP AS+P SSSS+APTS+SPTSSPKSSPSVSPSPA
Subjt:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASFE-SSPSPKASAP-SSSSEAPTSESPTSSPKSSPSVSPSPA

Query:  TDSP-----ADSPADSNADTPTAASPDTDVSSPPSPNAADGP-VADGPF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF
        TDSP     ADSPAD+ ADTPTAASPD+DVSSPPSP+AAD P  ADGP  ADGP ADSPADSPAG  +S  + LK+TSAV GG +A  G +AF
Subjt:  TDSP-----ADSPADSNADTPTAASPDTDVSSPPSPNAADGP-VADGPF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF

XP_022934589.1 mucin-1-like [Cucurbita moschata]5.9e-3355.23Show/hide
Query:  MASQS-VIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASS---------------------------------------SPADSPKASF
        MASQS V+VFALIF+AAVAG FA+APT +PS SP+PK++PSDS++ SP+SS                                       +PAD+P AS 
Subjt:  MASQS-VIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASS---------------------------------------SPADSPKASF

Query:  ESSPSPKASAPSSSSEAPTSESPTSSPKSSPSVSPSPATDSPADSPADSNADTPTAASPDTDVSSPPS--PNAADGPVADGPF-------------ADGP
        ESSPSP ASAP+S SEAP S SP SSP SSPSVSPSPATDSPA SPADS +    AASPD+D SSPPS  P+AAD PVADGP              ADG 
Subjt:  ESSPSPKASAPSSSSEAPTSESPTSSPKSSPSVSPSPATDSPADSPADSNADTPTAASPDTDVSSPPS--PNAADGPVADGPF-------------ADGP

Query:  VADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF
        ++DSPADSP G   S  S LK+TSA   GAVAV GLFAF
Subjt:  VADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF

XP_031737954.1 classical arabinogalactan protein 11 [Cucumis sativus]1.2e-4671.29Show/hide
Query:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASFE-SSPSPKASAPSSSSEAPTSESPTSSPKSSPSVSPSPAT
        MASQ+V+VFALIFLAAVAGVFA+APTESPS SPSPKASPSDS+SPSP+SSSPA SPKAS E +SPSP AS+PSSSS+APTS SPTSSP SSPSVSPSPAT
Subjt:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASFE-SSPSPKASAPSSSSEAPTSESPTSSPKSSPSVSPSPAT

Query:  DSP----------ADSPADSNADTPTAASPDTDVSSPPSPNAADGPVADGP-------------FADGPV-ADSPADSPAGAHRSDASGLKITSAVAGGA
        DSP          ADSPADS ADTPTAASPD+DVSSPPSP+AAD P ADGP              ADGPV ADSPADSPA +  S  + LK+TSA+  G 
Subjt:  DSP----------ADSPADSNADTPTAASPDTDVSSPPSPNAADGPVADGP-------------FADGPV-ADSPADSPAGAHRSDASGLKITSAVAGGA

Query:  VAVVGLFAF
        VA VG FAF
Subjt:  VAVVGLFAF

XP_038887418.1 classical arabinogalactan protein 6-like [Benincasa hispida]3.7e-3567.02Show/hide
Query:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASFESSPSPKASAPSSSSEAPTSESPTSSPKSSPSVSPSPATD
        MASQSV +FALIFLAAVA V A+APT+SPSASPSPKASPSDSKSPSP+SSSPA +PKAS ESSPSP ASAPSSSS+APTS+SPT SP SSPSVSPSPA D
Subjt:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASFESSPSPKASAPSSSSEAPTSESPTSSPKSSPSVSPSPATD

Query:  SPADS----PADSNADTPTAASPDTDVSSPPSPNAADGPVADGPFADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF
        SPADS    PADS+ADTPTAASPD         +A+D                          S ASGLK+T AVAGGAVAVVGL AF
Subjt:  SPADS----PADSNADTPTAASPDTDVSSPPSPNAADGPVADGPFADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF

TrEMBL top hitse value%identityAlignment
A0A0A0LDP4 Uncharacterized protein3.2e-4076.74Show/hide
Query:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASFE-SSPSPKASAPSSSSEAPTSESPTSSPKSSPSVSPSPAT
        MASQ+V+VFALIFLAAVAGVFA+APTESPS SPSPKASPSDS+SPSP+SSSPA SPKAS E +SPSP AS+PSSSS+APTS SPTSSP SSPSVSPSPAT
Subjt:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASFE-SSPSPKASAPSSSSEAPTSESPTSSPKSSPSVSPSPAT

Query:  DSP----------ADSPADSNADTPTAASPDTDVSSPPSPNAADGPVADGP-FADGP-VADSP--ADSPAGA
        DSP          ADSPADS ADTPTAASPD+DVSSPPSP+AAD P ADGP  ADGP  AD P  AD P  A
Subjt:  DSP----------ADSPADSNADTPTAASPDTDVSSPPSPNAADGPVADGP-FADGP-VADSP--ADSPAGA

A0A1S3BND1 mucin-18.3e-4976.68Show/hide
Query:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASFE-SSPSPKASAP-SSSSEAPTSESPTSSPKSSPSVSPSPA
        MASQSV+VFALIF+AAVAGVFA+APTESPS SPSPKASPSDS+SPSP+SSSPA SPKAS E +SPSP AS+P SSSS+APTS+SPTSSPKSSPSVSPSPA
Subjt:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASFE-SSPSPKASAP-SSSSEAPTSESPTSSPKSSPSVSPSPA

Query:  TDSP-----ADSPADSNADTPTAASPDTDVSSPPSPNAADGP-VADGPF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF
        TDSP     ADSPAD+ ADTPTAASPD+DVSSPPSP+AAD P  ADGP  ADGP ADSPADSPAG  +S  + LK+TSAV GG +A  G +AF
Subjt:  TDSP-----ADSPADSNADTPTAASPDTDVSSPPSPNAADGP-VADGPF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF

A0A5A7VIK3 Mucin-18.3e-4976.68Show/hide
Query:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASFE-SSPSPKASAP-SSSSEAPTSESPTSSPKSSPSVSPSPA
        MASQSV+VFALIF+AAVAGVFA+APTESPS SPSPKASPSDS+SPSP+SSSPA SPKAS E +SPSP AS+P SSSS+APTS+SPTSSPKSSPSVSPSPA
Subjt:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASFE-SSPSPKASAP-SSSSEAPTSESPTSSPKSSPSVSPSPA

Query:  TDSP-----ADSPADSNADTPTAASPDTDVSSPPSPNAADGP-VADGPF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF
        TDSP     ADSPAD+ ADTPTAASPD+DVSSPPSP+AAD P  ADGP  ADGP ADSPADSPAG  +S  + LK+TSAV GG +A  G +AF
Subjt:  TDSP-----ADSPADSNADTPTAASPDTDVSSPPSPNAADGP-VADGPF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF

A0A6J1F318 mucin-1-like2.9e-3355.23Show/hide
Query:  MASQS-VIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASS---------------------------------------SPADSPKASF
        MASQS V+VFALIF+AAVAG FA+APT +PS SP+PK++PSDS++ SP+SS                                       +PAD+P AS 
Subjt:  MASQS-VIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASS---------------------------------------SPADSPKASF

Query:  ESSPSPKASAPSSSSEAPTSESPTSSPKSSPSVSPSPATDSPADSPADSNADTPTAASPDTDVSSPPS--PNAADGPVADGPF-------------ADGP
        ESSPSP ASAP+S SEAP S SP SSP SSPSVSPSPATDSPA SPADS +    AASPD+D SSPPS  P+AAD PVADGP              ADG 
Subjt:  ESSPSPKASAPSSSSEAPTSESPTSSPKSSPSVSPSPATDSPADSPADSNADTPTAASPDTDVSSPPS--PNAADGPVADGPF-------------ADGP

Query:  VADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF
        ++DSPADSP G   S  S LK+TSA   GAVAV GLFAF
Subjt:  VADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF

A0A6J1J779 mucin-1-like1.6e-3152.82Show/hide
Query:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASS--------------------------------------------------
        MASQSV+VFALIF+AAVAG FA+APT SPS SP+PK++PSDS++ SP+SS                                                  
Subjt:  MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASS--------------------------------------------------

Query:  ---------SPADSPKASFESSPSPKASAPSSSSEAPTSESPTSSPKSSPSVSPSPATDSPADSPADSNADTPTAASPDTDVSSPPS--PNAADGPVADG
                 +PAD+P AS ESSPSP ASAP+S SEAP S SP SSP SSPSVSPSP TDSPA SPADS +    AASPD+D SSPPS  P+AAD PVADG
Subjt:  ---------SPADSPKASFESSPSPKASAPSSSSEAPTSESPTSSPKSSPSVSPSPATDSPADSPADSNADTPTAASPDTDVSSPPS--PNAADGPVADG

Query:  PF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGG--AVAVVGLFAF
        P   DGP +DSPAD+P G   S  S LK+TSA   G  AVAV GLFAF
Subjt:  PF-ADGPVADSPADSPAGAHRSDASGLKITSAVAGG--AVAVVGLFAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCAATCTGTTATTGTTTTTGCTCTGATATTCCTCGCGGCTGTCGCCGGAGTTTTTGCTCAGGCACCGACCGAATCCCCTTCGGCATCTCCCTCGCCAAAAGC
TTCCCCATCGGACTCTAAATCGCCTTCTCCGGCTTCTTCTTCTCCCGCAGACTCTCCAAAGGCCTCATTTGAGTCGTCGCCATCCCCGAAAGCTTCTGCTCCGTCTTCGT
CCTCCGAGGCTCCAACCAGCGAATCACCTACCAGCTCCCCGAAATCCTCCCCTTCCGTTTCTCCTTCTCCGGCTACTGACTCCCCCGCTGACTCTCCTGCTGACTCCAAT
GCTGACACCCCGACCGCTGCCTCGCCAGATACCGACGTCTCTTCTCCGCCATCCCCTAATGCCGCAGATGGCCCCGTTGCTGATGGCCCTTTTGCCGATGGCCCCGTTGC
TGATTCTCCTGCTGATTCGCCCGCTGGTGCTCATCGCAGCGACGCTTCAGGTCTGAAAATCACCTCTGCCGTTGCCGGTGGTGCCGTCGCCGTTGTCGGACTCTTTGCAT
TCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCAATCTGTTATTGTTTTTGCTCTGATATTCCTCGCGGCTGTCGCCGGAGTTTTTGCTCAGGCACCGACCGAATCCCCTTCGGCATCTCCCTCGCCAAAAGC
TTCCCCATCGGACTCTAAATCGCCTTCTCCGGCTTCTTCTTCTCCCGCAGACTCTCCAAAGGCCTCATTTGAGTCGTCGCCATCCCCGAAAGCTTCTGCTCCGTCTTCGT
CCTCCGAGGCTCCAACCAGCGAATCACCTACCAGCTCCCCGAAATCCTCCCCTTCCGTTTCTCCTTCTCCGGCTACTGACTCCCCCGCTGACTCTCCTGCTGACTCCAAT
GCTGACACCCCGACCGCTGCCTCGCCAGATACCGACGTCTCTTCTCCGCCATCCCCTAATGCCGCAGATGGCCCCGTTGCTGATGGCCCTTTTGCCGATGGCCCCGTTGC
TGATTCTCCTGCTGATTCGCCCGCTGGTGCTCATCGCAGCGACGCTTCAGGTCTGAAAATCACCTCTGCCGTTGCCGGTGGTGCCGTCGCCGTTGTCGGACTCTTTGCAT
TCTGA
Protein sequenceShow/hide protein sequence
MASQSVIVFALIFLAAVAGVFAQAPTESPSASPSPKASPSDSKSPSPASSSPADSPKASFESSPSPKASAPSSSSEAPTSESPTSSPKSSPSVSPSPATDSPADSPADSN
ADTPTAASPDTDVSSPPSPNAADGPVADGPFADGPVADSPADSPAGAHRSDASGLKITSAVAGGAVAVVGLFAF