CuGenDBv2

Gene ID	HG10011412
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	C2H2-type domain-containing protein
Genome location	Chr01:5798692..5800689
RNA-Seq Expression	HG10011412
Synteny	HG10011412
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR013087 - Zinc finger C2H2-type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0056275.1 Zinc finger family protein [Cucumis melo var. makuwa]

2.1e-131

94.07

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Query:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS
        STPKQDWNNAHE+HCSRERSRAAWK+IEEYL+PFVEKKK+EISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKY+DQHFDNRHYNLLN S
Subjt:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS

Query:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL
        R+RCLADLCGALHCDHVID VSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQ RTS FYIVISVLT+L
Subjt:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS
        FV+FFYVF YLY RGMRTRPQVLKRLSQSGRKKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS

XP_004145681.1 uncharacterized protein LOC101219582 [Cucumis sativus]

1.2e-129

92.8

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Query:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS
        STPKQDWNNAHE+HCSRERSRAAWK+IEEYL+PFVEKKK++ISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKY+DQHFDNRHYNLLN S
Subjt:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS

Query:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL
        R+RCLADLCGALHCDHVID VSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFL QFCDAHTCSGKPKPFSRGRQ R S FYIVISVLT+L
Subjt:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS
        FV+FFYVF YLY RGMRTRPQVLKRLSQSGRKKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS

XP_008450049.1 PREDICTED: uncharacterized protein LOC103491758 [Cucumis melo]

2.1e-131

94.07

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Query:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS
        STPKQDWNNAHE+HCSRERSRAAWK+IEEYL+PFVEKKK+EISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKY+DQHFDNRHYNLLN S
Subjt:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS

Query:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL
        R+RCLADLCGALHCDHVID VSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQ RTS FYIVISVLT+L
Subjt:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS
        FV+FFYVF YLY RGMRTRPQVLKRLSQSGRKKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS

XP_023526204.1 uncharacterized protein LOC111789755 [Cucurbita pepo subsp. pepo]

1.5e-124

89.41

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Query:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS
        STPKQD NNAHE+HCSRERSRAAWKIIEEYL+PFV+KK+++ISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC+K+FYEEKYLDQHF NRHY+LLN S
Subjt:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS

Query:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL
        RS+CLAD CGALHCD VIDT+SQKSKCNPAAAARNKHMCEGLADSCFP+D+GA ASHLHEFFLRQFCDAHTCSGKPKPFSRGRQ RTS FY+VISVLTV+
Subjt:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS
        FVLFFYVFIYLYKRGMRTRPQVLKRLS+SG KKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS

XP_038891552.1 uncharacterized protein LOC120080934 [Benincasa hispida]

2.1e-131

95.34

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Query:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS
        STPKQDWNNAHE+HCSRERSRAAWKIIEEYL+PFVEKKK++IS+KCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLN S
Subjt:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS

Query:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL
        RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGA ASHLHEFFLRQFCDAHTCSGKPKPFSRGRQ R + FYIVISVLTVL
Subjt:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS
        FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L8D2 C2H2-type domain-containing protein

5.6e-130

92.8

Show/hide

Query:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS
        STPKQDWNNAHE+HCSRERSRAAWK+IEEYL+PFVEKKK++ISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKY+DQHFDNRHYNLLN S
Subjt:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS

Query:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL
        R+RCLADLCGALHCDHVID VSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFL QFCDAHTCSGKPKPFSRGRQ R S FYIVISVLT+L
Subjt:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS
        FV+FFYVF YLY RGMRTRPQVLKRLSQSGRKKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS

A0A1S3BMS8 uncharacterized protein LOC103491758

1.0e-131

94.07

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Query:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS
        STPKQDWNNAHE+HCSRERSRAAWK+IEEYL+PFVEKKK+EISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKY+DQHFDNRHYNLLN S
Subjt:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS

Query:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL
        R+RCLADLCGALHCDHVID VSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQ RTS FYIVISVLT+L
Subjt:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS
        FV+FFYVF YLY RGMRTRPQVLKRLSQSGRKKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS

A0A5A7URM7 Zinc finger family protein

1.0e-131

94.07

Show/hide

Query:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS
        STPKQDWNNAHE+HCSRERSRAAWK+IEEYL+PFVEKKK+EISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKY+DQHFDNRHYNLLN S
Subjt:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS

Query:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL
        R+RCLADLCGALHCDHVID VSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQ RTS FYIVISVLT+L
Subjt:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS
        FV+FFYVF YLY RGMRTRPQVLKRLSQSGRKKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS

A0A6J1F459 uncharacterized protein LOC111441996

1.6e-124

88.98

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Query:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS
        STPKQD NNAHE+HCSRERSRAAWKIIEEYL+PF++KK++++STKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC+K+FYEEKYLDQHF NRHY+LLN S
Subjt:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS

Query:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL
        RS+CLAD CGALHCD VIDT+SQKSKCNPAAAARNKHMCEGLADSCFP+D+GA ASHLHEFFLRQFCDAHTCSGKPKPFSRGRQ RTS FYIVISVLTV+
Subjt:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS
        FVLFFYVFIYLYKRGMRTRPQVLKRLS+SG KKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS

A0A6J1J0Y1 uncharacterized protein LOC111482459

1.6e-124

89.41

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Query:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS
        STPKQD NNAHE+HCSRERSRAAWKIIEEYL+PFV+KK+++ISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC+K+FYEEKYLDQHF NRHY+LLN S
Subjt:  STPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNAS

Query:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL
        RS+CLAD CGALHCD VID++SQKSKCNPAAAARNKHMCEGLADSCFP+D+GA ASHLHEFFLRQFCDAHTCSGKPKPFSRGRQ RTS FYIVISVLTV+
Subjt:  RSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVL

Query:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS
        FVLFFYVFIYLYKRGMRTRPQVLKRLS+SG KKKPS
Subjt:  FVLFFYVFIYLYKRGMRTRPQVLKRLSQSGRKKKPS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G40710.1 zinc finger (C2H2 type) family protein

9.8e-87

61.33

Show/hide

Query:  HEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCG
        HEIHCSRERSR AWKII+EYL+P+VEK+++++ + CR+H DND++R+QE+HK   D N+W+CG+C+K FYEEKYLD+HFD+RHYNLLNAS  +CL+DLCG
Subjt:  HEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCG

Query:  ALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIY
        ALHCD V+DT   KSKCNPAAAA+N+H+CE LA+SCFPV++G+ A+ LH+FFLRQFCDAHTCSG  KP S+ +  + S  YI+ S++ ++ +L +Y F+Y
Subjt:  ALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIY

Query:  LYKRGMRTRPQVLKRLSQSGRKKKP
        L++RG++ R Q LKR+  +G KKKP
Subjt:  LYKRGMRTRPQVLKRLSQSGRKKKP

AT5G63280.1 C2H2-like zinc finger protein

1.2e-84

59.39

Show/hide

Query:  NNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLAD
        +NA EIHCSRERSRAAW+II++YL PFVE++++EI   CRLHPDND++RDQE HK H+D  +WKCGYC+K F +EK+LD+HF  RHYNLLN + ++CLAD
Subjt:  NNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLAD

Query:  LCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYV
        LCGALHCD V+ +   KSKCNP A A+N+H+CE +A+SCFPV +G  AS LHE FLRQFCDAHTC+G  KPF RG + ++  FY+ IS+LT++ +  FY+
Subjt:  LCGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYV

Query:  FIYLYKRGMRTRPQVLKRLSQSGRKKKPS
         ++L++R  R+  Q L+R+ +SG+K KPS
Subjt:  FIYLYKRGMRTRPQVLKRLSQSGRKKKPS

Sequences

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CDS sequence

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ATGTTCAGTACTCCGAAGCAGGATTGGAACAATGCTCATGAGATACATTGCTCGAGAGAAAGGAGTAGGGCGGCGTGGAAAATAATTGAGGAGTATCTAATACCCTTTGT
GGAAAAAAAGAAATTCGAGATTTCTACTAAGTGTAGGCTTCACCCTGATAATGACATGTTCAGAGATCAAGAACAGCACAAGAGCCATCTAGATTTTAATGACTGGAAGT
GTGGATATTGTAGAAAAAGATTCTATGAAGAGAAGTATCTCGATCAGCACTTTGACAATAGACACTATAATTTGCTCAATGCGAGTCGAAGCAGGTGCTTGGCAGATCTT
TGTGGTGCATTGCACTGTGACCATGTGATAGATACAGTATCACAGAAAAGTAAATGCAATCCTGCTGCTGCTGCGAGAAATAAACATATGTGTGAGGGTCTTGCTGACAG
CTGTTTTCCCGTCGATGAGGGTGCTTTGGCCAGCCATCTTCACGAATTCTTCTTGCGCCAGTTCTGTGATGCACACACATGTAGCGGAAAGCCAAAACCTTTCTCCAGAG
GTCGACAGGCTAGGACGAGTGCGTTCTACATTGTGATTTCAGTTTTGACAGTCCTTTTCGTGCTGTTTTTCTATGTCTTCATTTACTTGTATAAGAGGGGAATGAGAACT
CGACCACAGGTGCTGAAGCGTCTCTCACAAAGTGGAAGAAAGAAAAAACCTTCATAG

mRNA sequence

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Protein sequence

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MFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADL
CGALHCDHVIDTVSQKSKCNPAAAARNKHMCEGLADSCFPVDEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKRGMRT
RPQVLKRLSQSGRKKKPS

HG10011412 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome