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HG10011413 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011413
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGBBH-like_N domain-containing protein
Genome locationChr01:5801203..5805755
RNA-Seq ExpressionHG10011413
SyntenyHG10011413
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR010376 - Gamma-butyrobetaine hydroxylase-like, N-terminal
IPR038492 - GBBH-like, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022935010.1 uncharacterized protein LOC111442002 isoform X1 [Cucurbita moschata]2.7e-3792.05Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR
        MLAL+R FRTIHTT+DAPQVT+FAL APKYVEVKFADGSVFNLSAEFLRVYSPAADAK+R+IGGEKVISGRRHVGIMSAEPVGNYGVR
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR

XP_022984013.1 uncharacterized protein LOC111482460 isoform X1 [Cucurbita maxima]1.0e-3689.77Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR
        MLAL R FRTIHTT+D+PQ+T+FAL APKYVEVKFADGSVFNLSAEFLRVYSPAADAK+R+IGGEKVISGRRHVGIMSAEPVGNYGVR
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR

XP_031737737.1 uncharacterized protein LOC101219823 isoform X1 [Cucumis sativus]5.5e-3893.18Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR
        ML L R+FRTIHTT+DAPQ+TTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIR+IGGEKVISGRRHVGIMSAEPVGNYGVR
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR

XP_031737738.1 uncharacterized protein LOC101219823 isoform X2 [Cucumis sativus]6.1e-3793.02Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYG
        ML L R+FRTIHTT+DAPQ+TTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIR+IGGEKVISGRRHVGIMSAEPVGNYG
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYG

XP_038891561.1 uncharacterized protein LOC120080945 isoform X1 [Benincasa hispida]7.9e-3792.05Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR
        MLAL+RVFRTIHTTIDAPQ+TTFAL APKYVEVKFADGSVFNLSAEFLRVYSPAADAK+R++GGEKVISGRRHV IMSAEPVGNYGVR
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR

TrEMBL top hitse value%identityAlignment
A0A1S3BNF3 uncharacterized protein LOC103491759 isoform X18.5e-3788.64Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR
        ML L R+FRTIHTT++APQ+TTFALHAPKYVEVKFADGSVFNLSAEFLR+YSPAADAK+R+IGGEKVI GRRHVGIMSAEPVGNYGVR
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR

A0A6J1F4E2 uncharacterized protein LOC111442002 isoform X21.5e-3691.86Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYG
        MLAL+R FRTIHTT+DAPQVT+FAL APKYVEVKFADGSVFNLSAEFLRVYSPAADAK+R+IGGEKVISGRRHVGIMSAEPVGNYG
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYG

A0A6J1F9C8 uncharacterized protein LOC111442002 isoform X11.3e-3792.05Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR
        MLAL+R FRTIHTT+DAPQVT+FAL APKYVEVKFADGSVFNLSAEFLRVYSPAADAK+R+IGGEKVISGRRHVGIMSAEPVGNYGVR
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR

A0A6J1J985 uncharacterized protein LOC111482460 isoform X25.5e-3689.53Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYG
        MLAL R FRTIHTT+D+PQ+T+FAL APKYVEVKFADGSVFNLSAEFLRVYSPAADAK+R+IGGEKVISGRRHVGIMSAEPVGNYG
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYG

A0A6J1J9C4 uncharacterized protein LOC111482460 isoform X15.0e-3789.77Show/hide
Query:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR
        MLAL R FRTIHTT+D+PQ+T+FAL APKYVEVKFADGSVFNLSAEFLRVYSPAADAK+R+IGGEKVISGRRHVGIMSAEPVGNYGVR
Subjt:  MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27340.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).8.8e-2663.74Show/hide
Query:  MLALRRVF-RTIHTT--IDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR
        M A+ RV  R +H T  I  P+++ F++ +PK VEV++ADG+ FN S+EFLR++SPAAD K+R+IGGEKVISGRR+VGIMSAEPVGNYGVR
Subjt:  MLALRRVF-RTIHTT--IDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR

AT3G27340.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 693 Blast hits to 693 proteins in 282 species: Archae - 0; Bacteria - 530; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).6.7e-2663.44Show/hide
Query:  MLALRRVF-RTIHTT--IDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVRDQ
        M A+ RV  R +H T  I  P+++ F++ +PK VEV++ADG+ FN S+EFLR++SPAAD K+R+IGGEKVISGRR+VGIMSAEPVGNYGVR Q
Subjt:  MLALRRVF-RTIHTT--IDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVRDQ

AT3G27340.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 945 Blast hits to 945 proteins in 390 species: Archae - 0; Bacteria - 710; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink).8.8e-2663.74Show/hide
Query:  MLALRRVF-RTIHTT--IDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR
        M A+ RV  R +H T  I  P+++ F++ +PK VEV++ADG+ FN S+EFLR++SPAAD K+R+IGGEKVISGRR+VGIMSAEPVGNYGVR
Subjt:  MLALRRVF-RTIHTT--IDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGCTTTGCGTAGAGTTTTCCGGACGATCCATACCACCATCGATGCTCCTCAAGTTACCACTTTCGCTCTTCACGCCCCCAAATATGTAGAGGTTAAATTTGCAGA
TGGAAGTGTGTTCAACTTGTCAGCTGAATTCTTGAGAGTATATAGTCCAGCTGCTGATGCTAAAATCCGGACAATTGGTGGTGAAAAGGTAATTTCTGGACGACGTCATG
TCGGTATCATGTCTGCCGAACCAGTTGGGAACTATGGGGTAAGGGACCAGGGAGATAAAAGAAGACAAGTTGTCTCAGCACTGGCTGATGAAAAAGCTGTGAAGCAAGAA
CCTGAGCGTGGAAATAGACATGTTGCTGTAGCTCCTTGCAAGATTATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGCTTTGCGTAGAGTTTTCCGGACGATCCATACCACCATCGATGCTCCTCAAGTTACCACTTTCGCTCTTCACGCCCCCAAATATGTAGAGGTTAAATTTGCAGA
TGGAAGTGTGTTCAACTTGTCAGCTGAATTCTTGAGAGTATATAGTCCAGCTGCTGATGCTAAAATCCGGACAATTGGTGGTGAAAAGGTAATTTCTGGACGACGTCATG
TCGGTATCATGTCTGCCGAACCAGTTGGGAACTATGGGGTAAGGGACCAGGGAGATAAAAGAAGACAAGTTGTCTCAGCACTGGCTGATGAAAAAGCTGTGAAGCAAGAA
CCTGAGCGTGGAAATAGACATGTTGCTGTAGCTCCTTGCAAGATTATCTAA
Protein sequenceShow/hide protein sequence
MLALRRVFRTIHTTIDAPQVTTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRTIGGEKVISGRRHVGIMSAEPVGNYGVRDQGDKRRQVVSALADEKAVKQE
PERGNRHVAVAPCKII