| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6596753.1 DNA-directed RNA polymerases I and III subunit RPAC1, partial [Cucurbita argyrosperma subsp. sororia] | 3.6e-183 | 84.14 | Show/hide |
Query: MSGKDKSLHNMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIE
MSGKDK+LHNMSES+SEQE VGKEGIEWIMNL DVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFK+EVIDL+EDD+E
Subjt: MSGKDKSLHNMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIE
Query: FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLP
FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSD+DTPNEKNT+VFRLH RCERGK RLT TSKALTWLP
Subjt: FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLP
Query: NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAE
NGSEFPLVSDKSVSN+KPKTYTSFSCSQDTLPEF+NNPIGPKD DIILARL GQ VVLLE+IEDELAE
Subjt: NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAE
Query: ELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
ELK KCPVNVFDIEDIA+GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt: ELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
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| XP_022936430.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata] | 3.6e-183 | 84.14 | Show/hide |
Query: MSGKDKSLHNMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIE
MSGKDK+LHNMSES+SEQE VGKEGIEWIMNL DVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFK+EVIDL+EDD+E
Subjt: MSGKDKSLHNMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIE
Query: FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLP
FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSD+DTPNEKNT+VFRLH RCERGK RLT TSKALTWLP
Subjt: FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLP
Query: NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAE
NGSEFPLVSDKSVSN+KPKTYTSFSCSQDTLPEF+NNPIGPKD DIILARL GQ VVLLE+IEDELAE
Subjt: NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAE
Query: ELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
ELK KCPVNVFDIEDIA+GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt: ELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
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| XP_023005438.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita maxima] | 2.3e-182 | 83.89 | Show/hide |
Query: MSGKDKSLHNMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIE
MSG+DK+LH+MSES+SEQE VGKEGIEWIMNL DVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFK+EVIDL+EDD+E
Subjt: MSGKDKSLHNMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIE
Query: FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLP
FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSD+DTPNEKNT+VFRLH RCERGK RLT TS+ALTWLP
Subjt: FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLP
Query: NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAE
NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEF+NNPIGPKD DIILARL GQ VVLLEEIEDELAE
Subjt: NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAE
Query: ELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
ELK KCPVNVFDIEDIA+GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt: ELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
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| XP_023540473.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita pepo subsp. pepo] | 6.1e-183 | 84.14 | Show/hide |
Query: MSGKDKSLHNMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIE
MSGKDK+LHNMSES+SE E VGKEGIEWIMNL DVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFK+EVIDL+EDD+E
Subjt: MSGKDKSLHNMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIE
Query: FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLP
FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSD+DTPNEKNT+VFRLH RCERGK RLT TSKALTWLP
Subjt: FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLP
Query: NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAE
NGSEFPLVSDKSVSN+KPKTYTSFSCSQDTLPEF+NNPIGPKD DIILARL GQ VVLLEEIEDELAE
Subjt: NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAE
Query: ELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
ELK KCPVNVFDIEDIA+GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt: ELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
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| XP_038903474.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida] | 3.9e-190 | 88.24 | Show/hide |
Query: MSGKDKSLHNMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIE
MSGKDKSLHNMS+SESEQEGV KEGIEWIMNL DVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFK+EVIDL+EDDIE
Subjt: MSGKDKSLHNMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIE
Query: FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLP
FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGL+PIHVDPRLFEYSD+DTPNEKNT+VFRLHA CERGKQRLTVTSKALTWLP
Subjt: FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLP
Query: NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAE
NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ VVLLEEI+DELAE
Subjt: NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAE
Query: ELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
ELKKKCPVNVFDIEDIA GKKRATVARPRACTLCRECIRGD WEKRVALRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt: ELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0L637 DNA-directed RNA polymerases I and III subunit RPAC1 | 8.0e-181 | 84.69 | Show/hide |
Query: MSGKDKSLHNMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIE
MSGKDK+LHNMSESESEQEGV KEGIEWIMNL DVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGAFASMG DNSLRLD FRNNFK+EVIDL+EDDIE
Subjt: MSGKDKSLHNMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIE
Query: FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLP
FDMIGIDP+LANAFRRILI+EVPTMAIEKVL ANNTSIVQDEVLAHRLGL+PI VDPRLF+YSD+D PNE NT+VFRLHA CERGK RLTVTSKALTWLP
Subjt: FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLP
Query: NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTL-PEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELA
NGSEFPLVSDKSVSNSKPKTYTSFSCSQ+TL EFSNNPIGPKDSDIILARLGPGQ VVL+EEIEDELA
Subjt: NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTL-PEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELA
Query: EELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
EEL+KKCPVNVFDIEDIA GKKRATVARPR CTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt: EELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
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| A0A1S4DX61 DNA-directed RNA polymerases I and III subunit RPAC1 | 2.0e-176 | 82.91 | Show/hide |
Query: MSGKDKSLH-NMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDI
MSGKDK+LH M+ESESEQE VGKEGIEWIMNL DVPMKLPPH+ELQRTRVECK DAPIHTDTIQYSGAFASMG DNSLRLD FRNNFK+EVI+L+ DDI
Subjt: MSGKDKSLH-NMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDI
Query: EFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWL
EFDMIGIDP+LANAFRRILIAEVPTMAIEKVL ANNTSIVQDEVLAHRLGLIPI VDPRLF+YSD+D PNE NT+VFRLHARCERGK RLTV S+ALTWL
Subjt: EFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWL
Query: PNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELA
PNGSEFPLVSDKS+ NSKP+TYTSFSCSQD LPEFS N IGPKDSDIILARLGPGQ V+LLEEIEDELA
Subjt: PNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELA
Query: EELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
EELK+KCPVNVFDIEDIA GKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPP VLFTEAVKILEDKCERLIAELS
Subjt: EELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
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| A0A6J1DXI7 DNA-directed RNA polymerases I and III subunit RPAC1 | 1.4e-177 | 84.25 | Show/hide |
Query: MSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSL
MS+SESEQ GKEGIEWIMNL DVPMKLPPHLE+QRTRVECKADAPIHTDTIQYSGA+ASMGVDNSLRLDYFRNNFK+EVIDL EDDIEFDMIGIDP+L
Subjt: MSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSL
Query: ANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLPNGSEFPLVSD
ANAFRRILIAEVPTMAIEKVLVANNTS++QDEVLAHRLGLIPIHVDPRLFEYSD+DTPNEKNT+VFRLHARCERGK RLTVTSK LTWLPNGSEFPLVSD
Subjt: ANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLPNGSEFPLVSD
Query: KSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAEELKKKCPVNV
KSV NSKPKTYTSFSCSQDTLPEFSNN IGPKD+DII+ARLGPGQ VVL EEIEDELAEELKKKCPV+V
Subjt: KSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAEELKKKCPVNV
Query: FDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
FDIEDIA+GKKRA VARPR+CTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt: FDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
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| A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC1 | 1.7e-183 | 84.14 | Show/hide |
Query: MSGKDKSLHNMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIE
MSGKDK+LHNMSES+SEQE VGKEGIEWIMNL DVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFK+EVIDL+EDD+E
Subjt: MSGKDKSLHNMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIE
Query: FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLP
FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSD+DTPNEKNT+VFRLH RCERGK RLT TSKALTWLP
Subjt: FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLP
Query: NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAE
NGSEFPLVSDKSVSN+KPKTYTSFSCSQDTLPEF+NNPIGPKD DIILARL GQ VVLLE+IEDELAE
Subjt: NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAE
Query: ELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
ELK KCPVNVFDIEDIA+GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt: ELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
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| A0A6J1L269 DNA-directed RNA polymerases I and III subunit RPAC1 | 1.1e-182 | 83.89 | Show/hide |
Query: MSGKDKSLHNMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIE
MSG+DK+LH+MSES+SEQE VGKEGIEWIMNL DVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFK+EVIDL+EDD+E
Subjt: MSGKDKSLHNMSESESEQEGVGKEGIEWIMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIE
Query: FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLP
FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPI VDPRLFEYSD+DTPNEKNT+VFRLH RCERGK RLT TS+ALTWLP
Subjt: FDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEYSDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLP
Query: NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAE
NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEF+NNPIGPKD DIILARL GQ VVLLEEIEDELAE
Subjt: NGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAE
Query: ELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
ELK KCPVNVFDIEDIA+GKKRATVARPRACTLCRECIRG+AWEKRV+LRRVKDHFIFKIESTGALPP+VLFTEAVKILEDKCERLIAELS
Subjt: ELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
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| SwissProt top hits | e value | %identity | Alignment |
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| O15160 DNA-directed RNA polymerases I and III subunit RPAC1 | 4.4e-59 | 39.12 | Show/hide |
Query: LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
+E R+RV + T + G ++ G D++ D F NF+V+V+ + E+ +EFDM+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE
Subjt: LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
Query: VLAHRLGLIPIHVDPRLFEYSDR--DTPNEKNTVVFRLHARCERGKQRL-------------TVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS
+LAHRLGLIPIH DPRLFEY ++ + E +T+ FRL RC R V ++ +TW+P G++ L
Subjt: VLAHRLGLIPIHVDPRLFEYSDR--DTPNEKNTVVFRLHARCERGKQRL-------------TVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS
Query: QDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAEELKKKCPVNVFDIEDIADGKKRATVAR
F I P DI++A+L PGQ + LLE +E E AEEL + V +++++ GKK A VA
Subjt: QDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAEELKKKCPVNVFDIEDIADGKKRATVAR
Query: PRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAEL
PR T RE R + +K V L RV+DH+IF +ESTG LPP VL +EA+K+L KC R + EL
Subjt: PRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAEL
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| O94616 DNA-directed RNA polymerases I and III subunit RPAC1 | 3.5e-48 | 33.61 | Show/hide |
Query: LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
++ RT + +D ++ + G + DN LD F+ N KV + L ++ + F++ GID S+ANAFRRILIAE+PT+A E V + NNTSI+QDE
Subjt: LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
Query: VLAHRLGLIPIHVDPRLFEYSDRDTPNEK------NTVVFRLHARCERGK---------QRLTVTSKA----LTWLPNGSEFPLVSDKSVSNSKPKTYTS
VL+HR+GL+PI DP +F++ P ++ +TVVF L+ +CE K +RL V S+ L W P G +
Subjt: VLAHRLGLIPIHVDPRLFEYSDRDTPNEK------NTVVFRLHARCERGK---------QRLTVTSKA----LTWLPNGSEFPLVSDKSVSNSKPKTYTS
Query: FSCSQDTLPEFSNNPIGPKDSDIILARLGPGQVV--------------------------------LLEEIEDELAEELKKKCPVNVFDIEDIADGKKRA
F++NPI + DI++A+L PGQ + +L IE E A + +K P V ++E+ DGKK+A
Subjt: FSCSQDTLPEFSNNPIGPKDSDIILARLGPGQVV--------------------------------LLEEIEDELAEELKKKCPVNVFDIEDIADGKKRA
Query: TVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKC
VA R T+ REC+R + +V L RV+DH++F +ESTG + P VLF +++ +L+ KC
Subjt: TVARPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKC
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| P52432 DNA-directed RNA polymerases I and III subunit RPAC1 | 8.3e-58 | 40.86 | Show/hide |
Query: LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
+E RTRV + T + G +A G D++ + F NF+V+V+ + ED +EFDM+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE
Subjt: LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
Query: VLAHRLGLIPIHVDPRLFEYSDR--DTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIG
+LAHRLGLIPI DPRLFEY ++ + E +T+ FRL RC R +S N + ++ T+ D PE I
Subjt: VLAHRLGLIPIHVDPRLFEYSDR--DTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTLPEFSNNPIG
Query: PKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAEELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRG
P DI++A+L PGQ + LLE +E E AEEL + V ++E++ GKK A VA R T RE R
Subjt: PKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAEELKKKCPVNVFDIEDIADGKKRATVARPRACTLCRECIRG
Query: DAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAEL
+ +K V L RV+DH+IF +ESTG LPP VL +EA+KIL KC R + EL
Subjt: DAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAEL
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| Q32L22 DNA-directed RNA polymerases I and III subunit RPAC1 | 5.2e-60 | 39.94 | Show/hide |
Query: LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
+E RTRV + T + G ++ G D++ D F NF+V+V+ + E+ +EFDM+GID ++ANAFRRIL+AEVPTMA+EKVLV NNTSIVQDE
Subjt: LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDE
Query: VLAHRLGLIPIHVDPRLFEYSDR--DTPNEKNTVVFRLHARCERGKQRL-------------TVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS
+LAHRLGLIPIH DPRLFEY ++ + E +T+ FRL RC R V ++ +TW+P G++ L
Subjt: VLAHRLGLIPIHVDPRLFEYSDR--DTPNEKNTVVFRLHARCERGKQRL-------------TVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS
Query: QDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAEELKKKCPVNVFDIEDIADGKKRATVAR
F I P DI++A+L PGQ + LLE +E E AEEL + V ++++I GKK A VA
Subjt: QDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAEELKKKCPVNVFDIEDIADGKKRATVAR
Query: PRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAEL
PR T RE R + +K V L RV+DHFIF +ESTG LPP VL +EA+K+L KC+R + EL
Subjt: PRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAEL
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| Q54SN4 DNA-directed RNA polymerases I and III subunit rpac1 | 6.3e-58 | 38.64 | Show/hide |
Query: PHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQ
P+LE +RT+V + YSGA+ S+G DNS L+ F+ NFK+ ++ +++ F+MIGID +ANA RRI+I+E+PTMAIEKV + NNTSI+Q
Subjt: PHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQ
Query: DEVLAHRLGLIPIHVDPRLFEYSDRDTPNE----KNTVVFRLHARCER----GK-QRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTL
DEVLAHRLG+IPI VDPR F + PN+ ++T++F+L +CE+ GK T SK L W+P + ++
Subjt: DEVLAHRLGLIPIHVDPRLFEYSDRDTPNE----KNTVVFRLHARCER----GK-QRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCSQDTL
Query: PEFSNNPIGPKDSDIILARLGPGQVVLLE--------------------------------EIEDELAEELKKKCPVNVFDIEDIADGKKRATVARPRAC
P + P P + DI + +L PGQV+ ++ I+ + A +L +KCP VFDIED + ARP C
Subjt: PEFSNNPIGPKDSDIILARLGPGQVVLLE--------------------------------EIEDELAEELKKKCPVNVFDIEDIADGKKRATVARPRAC
Query: TLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKC
T+CRECIR +E+ V + RV+DHFIF IESTGAL + +F EA+KI +KC
Subjt: TLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKC
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G60620.1 RNA polymerase I subunit 43 | 6.2e-117 | 60.27 | Show/hide |
Query: IMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAIE
I +L DVP LPPHLELQRTRV CK D+ IH I +SGA++SMGVDNS+RL+ F +FKV+VI L E D+ FDMIG+ +ANAFRRIL+AE+P+MAIE
Subjt: IMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAIE
Query: KVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS
KV VANNTS++QDEVLAHRLGLIPI DPRLFEY S+ D PNEKNT+VF+LH +C +G R V + L WLPNGSE L+ + S + PKTYTSF+ S
Subjt: KVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSCS
Query: QDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAEELKKKCPVNVFDIEDIADGKKRATVAR
QD+ PEF+ NPI P DI++A+LGPGQ VVLL+E E + AEEL K CP VFDIED+ G+KRATVAR
Subjt: QDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAEELKKKCPVNVFDIEDIADGKKRATVAR
Query: PRACTLCRECIR-GDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
PR C+LCRECIR G WE +V LRRVK+HFIF IESTG+ PP+VLF EAVKILEDKCER+I+ELS
Subjt: PRACTLCRECIR-GDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERLIAELS
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| AT1G60850.1 DNA-directed RNA polymerase family protein | 4.0e-108 | 57.5 | Show/hide |
Query: IMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAI
I +L DVP LPPHL+ Q+TRV K +AP HT + YSG + +S D++++L F +NFKV+V+ L + D+EFDMIGID + ANAFRRILIAEVP+MAI
Subjt: IMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAI
Query: EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
EKVL+A NTS++ DEVLAHR+GLIPI DPRLFEY S+ D NEKNT+VF+LH +C + + RL V + L WLPNGSE L+ + SKPKTYTSFSC
Subjt: EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
Query: SQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAEELKKKCPVNVFDIEDIADGKKRATVA
SQD+LPEF+NNPI P D DI++A+L PGQ VVL E+EDELAE L CP NVFDIED+ GKKRATVA
Subjt: SQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAEELKKKCPVNVFDIEDIADGKKRATVA
Query: RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERL
+PR CTLC+EC+R D V L VK+HFIF IESTG+LPP+VLFTEAVKILE KCE +
Subjt: RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERL
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| AT1G60850.2 DNA-directed RNA polymerase family protein | 4.0e-108 | 57.5 | Show/hide |
Query: IMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAI
I +L DVP LPPHL+ Q+TRV K +AP HT + YSG + +S D++++L F +NFKV+V+ L + D+EFDMIGID + ANAFRRILIAEVP+MAI
Subjt: IMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAI
Query: EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
EKVL+A NTS++ DEVLAHR+GLIPI DPRLFEY S+ D NEKNT+VF+LH +C + + RL V + L WLPNGSE L+ + SKPKTYTSFSC
Subjt: EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
Query: SQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAEELKKKCPVNVFDIEDIADGKKRATVA
SQD+LPEF+NNPI P D DI++A+L PGQ VVL E+EDELAE L CP NVFDIED+ GKKRATVA
Subjt: SQDTLPEFSNNPIGPKDSDIILARLGPGQ--------------------------------VVLLEEIEDELAEELKKKCPVNVFDIEDIADGKKRATVA
Query: RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERL
+PR CTLC+EC+R D V L VK+HFIF IESTG+LPP+VLFTEAVKILE KCE +
Subjt: RPRACTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCERL
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| AT1G60850.3 DNA-directed RNA polymerase family protein | 8.5e-74 | 60.26 | Show/hide |
Query: IMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAI
I +L DVP LPPHL+ Q+TRV K +AP HT + YSG + +S D++++L F +NFKV+V+ L + D+EFDMIGID + ANAFRRILIAEVP+MAI
Subjt: IMNLSDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAI
Query: EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
EKVL+A NTS++ DEVLAHR+GLIPI DPRLFEY S+ D NEKNT+VF+LH +C + + RL V + L WLPNGSE L+ + SKPKTYTSFSC
Subjt: EKVLVANNTSIVQDEVLAHRLGLIPIHVDPRLFEY-SDRDTPNEKNTVVFRLHARCERGKQRLTVTSKALTWLPNGSEFPLVSDKSVSNSKPKTYTSFSC
Query: SQDTLPEFSNNPIGPKDSDIILARLGPGQVVLLE
SQD+LPEF+NNPI P D DI++A+L PGQ + LE
Subjt: SQDTLPEFSNNPIGPKDSDIILARLGPGQVVLLE
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| AT2G15430.1 DNA-directed RNA polymerase family protein | 3.2e-20 | 29.86 | Show/hide |
Query: KVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVD-------PRLFEYSDRDTPNEKNTVVFRLHA
K+++ +L++D +F++ D S+ANA RR++I+EVPT+AI+ V + N+S++ DE +AHRLGLIP+ + R + D D E +V FRL +
Subjt: KVEVIDLREDDIEFDMIGIDPSLANAFRRILIAEVPTMAIEKVLVANNTSIVQDEVLAHRLGLIPIHVD-------PRLFEYSDRDTPNEKNTVVFRLHA
Query: RCERGKQRLTVTSKAL-TWLPNGSEFPLVSDKSVSNS---KPKTYTSFSCSQD-TLPEFSNNPIGPKDSD----IILARLGPGQVVLLEEIEDELAEELK
+C Q L VTS+ L + P + D SVS+S K Q+ L + IG + + + +++ E++ D L++E K
Subjt: RCERGKQRLTVTSKAL-TWLPNGSEFPLVSDKSVSNS---KPKTYTSFSCSQD-TLPEFSNNPIGPKDSD----IILARLGPGQVVLLEEIEDELAEELK
Query: ----KKCPVNVFDIEDIADGKKRATVARPRACTLCRECI-RGDAWEK--RVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCE
+ P VF ++ + ++ V P A T E I + +A K + + D FIF +ESTGA+ L A+ +L+ K +
Subjt: ----KKCPVNVFDIEDIADGKKRATVARPRACTLCRECI-RGDAWEK--RVALRRVKDHFIFKIESTGALPPQVLFTEAVKILEDKCE
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