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HG10011435 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011435
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationChr01:5976137..5979400
RNA-Seq ExpressionHG10011435
SyntenyHG10011435
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065744.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa]3.1e-2395Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQA
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK PQAK+ ADPGKPQA
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQA

KAG7028294.1 RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-2288.71Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQA
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK+GGQPESPG  P+AK  ADP KPQA
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQA

XP_004148258.1 protein NOI4 [Cucumis sativus]6.3e-2484.51Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAASNHYCSNS
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK P+AK+ ADPGKPQA     C  S
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAASNHYCSNS

XP_008449047.1 PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]2.2e-2485.92Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAASNHYCSNS
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK PQAK+ ADPGKPQA     C  S
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAASNHYCSNS

XP_038905925.1 protein NOI4-like [Benincasa hispida]1.5e-2589.71Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAASNHYC
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK PQAKH ADPGKPQA     C
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAASNHYC

TrEMBL top hitse value%identityAlignment
A0A0A0L7F7 AvrRpt-cleavage domain-containing protein3.0e-2484.51Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAASNHYCSNS
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK P+AK+ ADPGKPQA     C  S
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAASNHYCSNS

A0A1S3BL66 RPM1-interacting protein 4-like1.0e-2485.92Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAASNHYCSNS
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK PQAK+ ADPGKPQA     C  S
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAASNHYCSNS

A0A5D3CRF8 RPM1-interacting protein 4-like1.5e-2395Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQA
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK PQAK+ ADPGKPQA
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQA

A0A6J1GG65 RPM1-interacting protein 4-like1.7e-2280.28Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAASNHYCSNS
        MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK+GGQPESPG  P+AK  ADP KPQA     C  S
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAASNHYCSNS

A0A6J5XI31 AvrRpt-cleavage domain-containing protein5.9e-2081.97Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK-PPQAKHGADPGKP
        MSEKG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+PESPGK  P  +HG +PG+P
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK-PPQAKHGADPGKP

SwissProt top hitse value%identityAlignment
O22633 Protein NOI49.8e-2075Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQA---KHGADPGKPQ
        MS+KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK  +      G DP KPQ
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQA---KHGADPGKPQ

Q8GYN5 RPM1-interacting protein 49.5e-0743.64Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADP
        EK   +PKFG+WD NNP+SA+G+T IFNK R+E+ +G       + P  +   +P
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADP

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein1.4e-1662.86Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK--PPQAKHGADPGKPQAASNHYC
        M++KG+PLPKFGEWDVN+P+SAEGFTVIFNKAR+EKK GG+ +SPGK  P   K+G    KP  A   +C
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGK--PPQAKHGADPGKPQAASNHYC

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein6.9e-2175Show/hide
Query:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQA---KHGADPGKPQ
        MS+KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK  +      G DP KPQ
Subjt:  MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQA---KHGADPGKPQ

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein7.7e-2074.19Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQA---KHGADPGKPQ
        +KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK  +      G DP KPQ
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQA---KHGADPGKPQ

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein7.7e-2074.19Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQA---KHGADPGKPQ
        +KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SPGK  +      G DP KPQ
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQA---KHGADPGKPQ

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein1.6e-1256.34Show/hide
Query:  KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT----GGQPESPGKPPQAKHGADPGKPQAASNHYCSN
        KG+PLPKFGEWDVNNPASAEGFTVIF+KA DEKKT    G  P S    PQ    +D     ++ N    N
Subjt:  KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT----GGQPESPGKPPQAKHGADPGKPQAASNHYCSN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAGAAGGGTCAGCCACTACCGAAGTTTGGGGAATGGGATGTTAATAATCCTGCTTCTGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGAGATGAGAAGAA
GACCGGTGGCCAACCCGAATCACCTGGAAAGCCACCTCAGGCGAAACATGGAGCAGATCCTGGCAAACCTCAGGCTGCCTCCAACCATTATTGCTCAAACTCAACAATGT
CCAATGTGTCTGATGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGAGAAGGGTCAGCCACTACCGAAGTTTGGGGAATGGGATGTTAATAATCCTGCTTCTGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGAGATGAGAAGAA
GACCGGTGGCCAACCCGAATCACCTGGAAAGCCACCTCAGGCGAAACATGGAGCAGATCCTGGCAAACCTCAGGCTGCCTCCAACCATTATTGCTCAAACTCAACAATGT
CCAATGTGTCTGATGAATAG
Protein sequenceShow/hide protein sequence
MSEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKPPQAKHGADPGKPQAASNHYCSNSTMSNVSDE