; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10011449 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011449
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTHO complex subunit 3
Genome locationChr01:6123868..6125853
RNA-Seq ExpressionHG10011449
SyntenyHG10011449
Gene Ontology termsGO:0006406 - mRNA export from nucleus (biological process)
GO:0010267 - production of ta-siRNAs involved in RNA interference (biological process)
GO:0000445 - THO complex part of transcription export complex (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR024977 - Anaphase-promoting complex subunit 4, WD40 domain
IPR036322 - WD40-repeat-containing domain superfamily
IPR040132 - TREX component Tex1/THOC3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065764.1 THO complex subunit 3 [Cucumis melo var. makuwa]6.0e-11499.5Show/hide
Query:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
        AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
Subjt:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG

Query:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
        YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
Subjt:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG

Query:  K
        K
Subjt:  K

XP_004149572.1 THO complex subunit 3 [Cucumis sativus]2.3e-11399.5Show/hide
Query:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
        AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
Subjt:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG

Query:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
        YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
Subjt:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG

XP_022155009.1 THO complex subunit 3 isoform X2 [Momordica charantia]8.2e-11197.49Show/hide
Query:  ELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGY
        ELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRP+ETLMAHTAGCYCIAIDPVG Y
Subjt:  ELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGY

Query:  FAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
        FAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFN+TG+YIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
Subjt:  FAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG

XP_022946738.1 THO complex subunit 3 [Cucurbita moschata]2.5e-11298.5Show/hide
Query:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
        AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
Subjt:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG

Query:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
        YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
Subjt:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG

XP_038905145.1 THO complex subunit 3 [Benincasa hispida]1.8e-113100Show/hide
Query:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
        AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
Subjt:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG

Query:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
        YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
Subjt:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG

TrEMBL top hitse value%identityAlignment
A0A0A0L651 WD_REPEATS_REGION domain-containing protein1.1e-11399.5Show/hide
Query:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
        AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
Subjt:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG

Query:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
        YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
Subjt:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG

A0A1S3BM38 THO complex subunit 31.1e-11399.5Show/hide
Query:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
        AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
Subjt:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG

Query:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
        YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
Subjt:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG

A0A5D3BC11 THO complex subunit 32.9e-11499.5Show/hide
Query:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
        AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
Subjt:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG

Query:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
        YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
Subjt:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG

Query:  K
        K
Subjt:  K

A0A6J1G4N9 THO complex subunit 31.2e-11298.5Show/hide
Query:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
        AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
Subjt:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG

Query:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
        YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
Subjt:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG

A0A6J1KZA7 THO complex subunit 31.2e-11298.5Show/hide
Query:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
        AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG
Subjt:  AELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG

Query:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
        YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG
Subjt:  YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEG

SwissProt top hitse value%identityAlignment
Q29RH4 THO complex subunit 34.0e-6051Show/hide
Query:  AIAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPV
        A     GENINI + PDG  IAVGN+DD +T +D +  +   + +F +EVNEI+WN    MFFLT GNG + +L+YP L+P++++ AH + C CI  DP+
Subjt:  AIAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPV

Query:  GGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA
        G YFA GSAD+LVSLWD+ +++CVR F++L+WPVRT+SF+H G+ +ASASED FIDI+ V+TG  + ++ C +   +V W+PK  LLA+A DDK+ KY +
Subjt:  GGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA

Q8VE80 THO complex subunit 34.0e-6051Show/hide
Query:  AIAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPV
        A     GENINI + PDG  IAVGN+DD +T +D +  +   + +F +EVNEI+WN    MFFLT GNG + +L+YP L+P++++ AH + C CI  DP+
Subjt:  AIAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPV

Query:  GGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA
        G YFA GSAD+LVSLWD+ +++CVR F++L+WPVRT+SF+H G+ +ASASED FIDI+ V+TG  + ++ C +   +V W+PK  LLA+A DDK+ KY +
Subjt:  GGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA

Q96J01 THO complex subunit 34.0e-6051Show/hide
Query:  AIAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPV
        A     GENINI + PDG  IAVGN+DD +T +D +  +   + +F +EVNEI+WN    MFFLT GNG + +L+YP L+P++++ AH + C CI  DP+
Subjt:  AIAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPV

Query:  GGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA
        G YFA GSAD+LVSLWD+ +++CVR F++L+WPVRT+SF+H G+ +ASASED FIDI+ V+TG  + ++ C +   +V W+PK  LLA+A DDK+ KY +
Subjt:  GGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA

Q9FKT5 THO complex subunit 32.2e-10388.5Show/hide
Query:  ELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGY
        ELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKP+H+RKFNYEVNEIAWNM G+ FFLTTG GTVEVL+YPSL+P++TL AHTAGCYCIAIDP G Y
Subjt:  ELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGY

Query:  FAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQADEG
        FAVGSADSLVSLWDIS MLC+RTFTKLEWPVRTISFN++GEYIASASEDLFIDI+NVQTGRTVHQIPCRAAMNSVEWNPK+NLLAYAGDDKN KY  DEG
Subjt:  FAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQADEG

Q9USL1 Uncharacterized WD repeat-containing protein C18B5.10c2.2e-4237.24Show/hide
Query:  IAELSG--ENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDP
        IAE+    ENI  T+ P G +    +RDD L+ +D R+ + +   +   E NE  W+ + ++FF+TTG GTV+++ +PSL+ +  + AH + C+CI   P
Subjt:  IAELSG--ENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDP

Query:  VGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN
           + A+G AD++ SLWD  +++C R+ T++++P+RT+SF++   Y+AS SED ++DI++ +TG  + +IP    +N V W+P  ++LAYA  + N
Subjt:  VGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN

Arabidopsis top hitse value%identityAlignment
AT1G11160.1 Transducin/WD40 repeat-like superfamily protein1.2e-1121.23Show/hide
Query:  VNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASA
        V+ +A+N    +      +G +++      + +     H + C  +   P G + A GS+D+ + +WD  +  C++T+      + TI F+  G ++ S 
Subjt:  VNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASA

Query:  SEDLFIDISNVQTGRTVHQIPC-RAAMNSVEWNPKHNLLAYAGDDK
          D  + + ++  G+ +H+  C    + S++++P   LLA    D+
Subjt:  SEDLFIDISNVQTGRTVHQIPC-RAAMNSVEWNPKHNLLAYAGDDK

AT5G08390.1 Transducin/WD40 repeat-like superfamily protein8.4e-1323.29Show/hide
Query:  VNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASA
        ++ + ++ +  +      +GT+++      + + TL  H + C  +   P G +FA GS D+ + +WDI +  C+ T+      V  + F   G +I S 
Subjt:  VNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASA

Query:  SEDLFIDISNVQTGRTVHQIPC-RAAMNSVEWNPKHNLLAYAGDDK
         ED  + + ++  G+ +H+       + S++++P   LLA    DK
Subjt:  SEDLFIDISNVQTGRTVHQIPC-RAAMNSVEWNPKHNLLAYAGDDK

AT5G25150.1 TBP-associated factor 52.4e-1223.94Show/hide
Query:  SGENINITYKPDGTHIAVGNRDDELTILDVR-KFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYF
        SG   + T+ P G  +   + D  + +   +     +  +  NY V +  ++  G  F   + + T  + +   ++P+  +  H +   C+   P   Y 
Subjt:  SGENINITYKPDGTHIAVGNRDDELTILDVR-KFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYF

Query:  AVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGD
        A GS+D  V LWD+    CVR F      V +++ +  G Y+AS  ED  I + ++ T R +  +      NS  W+     L+Y+G+
Subjt:  AVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGD

AT5G56130.1 Transducin/WD40 repeat-like superfamily protein1.6e-10488.5Show/hide
Query:  ELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGY
        ELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKP+H+RKFNYEVNEIAWNM G+ FFLTTG GTVEVL+YPSL+P++TL AHTAGCYCIAIDP G Y
Subjt:  ELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGY

Query:  FAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQADEG
        FAVGSADSLVSLWDIS MLC+RTFTKLEWPVRTISFN++GEYIASASEDLFIDI+NVQTGRTVHQIPCRAAMNSVEWNPK+NLLAYAGDDKN KY  DEG
Subjt:  FAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQADEG

AT5G67320.1 WD-40 repeat family protein1.2e-1126.15Show/hide
Query:  SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHK-RKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG--
        SG  +++ ++ +    A  + D  + +  + + +P         EVN + W+ TG +    + + T ++        +  L  HT   Y I   P G   
Subjt:  SGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHK-RKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG--

Query:  -------YFAVGSADSLVSLWD--ISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLA
                 A  S DS V LWD  + +MLC  +F     PV +++F+  GEYIAS S D  I I +++ G+ V        +  V WN + N +A
Subjt:  -------YFAVGSADSLVSLWD--ISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCATTTATCAGCTATAGCTGAGCTCAGTGGAGAAAATATCAACATCACCTACAAACCTGATGGGACGCACATAGCTGTTGGGAATAGGGATGATGAACTTACGAT
TCTGGATGTTAGGAAGTTTAAACCAATTCACAAGCGAAAGTTCAATTATGAGGTGAATGAAATTGCTTGGAACATGACTGGGGAGATGTTTTTCCTGACAACTGGAAACG
GTACTGTTGAAGTACTAGCATACCCGTCGCTTCGACCAATTGAAACTCTTATGGCTCATACAGCTGGTTGTTACTGCATTGCAATTGACCCAGTTGGAGGGTATTTTGCA
GTTGGAAGTGCTGATTCATTAGTTAGCCTATGGGATATCTCTCAGATGCTCTGTGTGCGAACATTTACAAAACTCGAATGGCCTGTCAGAACAATAAGTTTCAACCACAC
AGGAGAATACATTGCTTCTGCCAGTGAGGACTTGTTCATTGATATATCAAATGTTCAAACGGGACGAACGGTCCATCAGATTCCTTGTCGGGCTGCAATGAACAGTGTGG
AGTGGAATCCAAAACATAATTTACTTGCATATGCTGGGGATGACAAGAACAAGTATCAGGCTGATGAAGGCAAGTTATCTGTGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCATTTATCAGCTATAGCTGAGCTCAGTGGAGAAAATATCAACATCACCTACAAACCTGATGGGACGCACATAGCTGTTGGGAATAGGGATGATGAACTTACGAT
TCTGGATGTTAGGAAGTTTAAACCAATTCACAAGCGAAAGTTCAATTATGAGGTGAATGAAATTGCTTGGAACATGACTGGGGAGATGTTTTTCCTGACAACTGGAAACG
GTACTGTTGAAGTACTAGCATACCCGTCGCTTCGACCAATTGAAACTCTTATGGCTCATACAGCTGGTTGTTACTGCATTGCAATTGACCCAGTTGGAGGGTATTTTGCA
GTTGGAAGTGCTGATTCATTAGTTAGCCTATGGGATATCTCTCAGATGCTCTGTGTGCGAACATTTACAAAACTCGAATGGCCTGTCAGAACAATAAGTTTCAACCACAC
AGGAGAATACATTGCTTCTGCCAGTGAGGACTTGTTCATTGATATATCAAATGTTCAAACGGGACGAACGGTCCATCAGATTCCTTGTCGGGCTGCAATGAACAGTGTGG
AGTGGAATCCAAAACATAATTTACTTGCATATGCTGGGGATGACAAGAACAAGTATCAGGCTGATGAAGGCAAGTTATCTGTGCATTGA
Protein sequenceShow/hide protein sequence
MVHLSAIAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFA
VGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGKLSVH