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HG10011451 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011451
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr01:6138572..6139372
RNA-Seq ExpressionHG10011451
SyntenyHG10011451
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038886170.1 uncharacterized protein LOC120076417 [Benincasa hispida]3.3e-0955.38Show/hide
Query:  MEFHPRCCEAKVLEALAICFGMEDIFSIYISNLMIESNCL-KVVKLLNDEVIDLPKVSFFIDEAK
        ++F  RC +  +LEA+AICFG+E + SI ISN+M+ES+CL +V+ LLND+V+DL +VSF  +EAK
Subjt:  MEFHPRCCEAKVLEALAICFGMEDIFSIYISNLMIESNCL-KVVKLLNDEVIDLPKVSFFIDEAK
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTGTGGCAGCCCTTGCGGAAGGTCTTCATGGAGTTATCAAGATCATTGGTTTTTGCTCTATGATCGTGTCTCTCCCCCAAACTTGGATAAGGTCGTGATCATCGC
TTGGAAGATTTGGGAGGCAAGGAATAATCTAGTGCTTCAGATGCATCTGGCAGAAGCTAAGACCATCATCAGTGATTCAATTGACGAGCATATTATGGAGTTTCACCCTA
GATGCTGTGAGGCGAAAGTTCTTGAAGCGTTGGCTATATGCTTTGGCATGGAGGATATTTTCTCGATCTATATTTCAAACCTTATGATTGAATCTAATTGCTTGAAGGTT
GTTAAACTGTTGAATGATGAGGTGATCGACCTCCCTAAAGTCTCTTTCTTCATTGACGAGGCTAAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTGTGGCAGCCCTTGCGGAAGGTCTTCATGGAGTTATCAAGATCATTGGTTTTTGCTCTATGATCGTGTCTCTCCCCCAAACTTGGATAAGGTCGTGATCATCGC
TTGGAAGATTTGGGAGGCAAGGAATAATCTAGTGCTTCAGATGCATCTGGCAGAAGCTAAGACCATCATCAGTGATTCAATTGACGAGCATATTATGGAGTTTCACCCTA
GATGCTGTGAGGCGAAAGTTCTTGAAGCGTTGGCTATATGCTTTGGCATGGAGGATATTTTCTCGATCTATATTTCAAACCTTATGATTGAATCTAATTGCTTGAAGGTT
GTTAAACTGTTGAATGATGAGGTGATCGACCTCCCTAAAGTCTCTTTCTTCATTGACGAGGCTAAAGTTTGA
Protein sequenceShow/hide protein sequence
MYCGSPCGRSSWSYQDHWFLLYDRVSPPNLDKVVIIAWKIWEARNNLVLQMHLAEAKTIISDSIDEHIMEFHPRCCEAKVLEALAICFGMEDIFSIYISNLMIESNCLKV
VKLLNDEVIDLPKVSFFIDEAKV