| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0065822.1 DNA mismatch repair protein MSH5 [Cucumis melo var. makuwa] | 1.1e-65 | 32.7 | Show/hide |
Query: MHGLVSFLLRVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVT
M GL SFLLRVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL GMS + V++ LVYLRVT
Subjt: MHGLVSFLLRVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVT
Query: GMDDGLNVKERICY--------------------------------------------------------------------------------------
GMDDGLN+KERICY
Subjt: GMDDGLNVKERICY--------------------------------------------------------------------------------------
Query: --------------------------------------------------------------------------------------------------SI
SI
Subjt: --------------------------------------------------------------------------------------------------SI
Query: CSLLHVNKIFEVGMSENLRENMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFP
CSLLHVNKIFEVGMSENL+ENMKY NLDIVEK V+GVLDVSRSKEKSYETIVKEGFC EEVSSMELAQFP
Subjt: CSLLHVNKIFEVGMSENLRENMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFP
Query: QLCKDKIAPCIVYIHQIEW------------------------------------------------GAIF----------LSPHVIAYLVNSLHIFGMC
QLCKD IAPCIVYIHQI + G I+ + V LV SLH+
Subjt: QLCKDKIAPCIVYIHQIEW------------------------------------------------GAIF----------LSPHVIAYLVNSLHIFGMC
Query: SFIGSNCHHSSVKTMPFKSHYGSDAAEQANFQRLANPNDVVDELLRDDTL-EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT
F S+ + +++Y + + N V+ E+ D + + + C N + TG + + VALIVFLSHIGSFVPADAAT
Subjt: SFIGSNCHHSSVKTMPFKSHYGSDAAEQANFQRLANPNDVVDELLRDDTL-EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT
Query: ----------------------------------------------------------------------------VLVCTHLTELINESLLPMCERIKF
VLVCTHLTELINESLL M ERIKF
Subjt: ----------------------------------------------------------------------------VLVCTHLTELINESLLPMCERIKF
Query: YNMSVIRADNDCTENEDIVFLYRLVPGHALPSYG
YNMSVIR DNDCTENEDIVFLYRLVPGHALPSYG
Subjt: YNMSVIRADNDCTENEDIVFLYRLVPGHALPSYG
|
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| TYJ96561.1 DNA mismatch repair protein MSH5 [Cucumis melo var. makuwa] | 4.1e-68 | 33.75 | Show/hide |
Query: MHGLVSFLLRVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVT
M GL SFLLRVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL GMS + V++ LVYLRVT
Subjt: MHGLVSFLLRVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVT
Query: GMDDGLNVKERICY--------------------------------------------------------------------------------------
GMDDGLN+KERICY
Subjt: GMDDGLNVKERICY--------------------------------------------------------------------------------------
Query: ----------------------------------------------------------SICSLLHVNKIFEVGMSENLRENMKYLNLDIVEK--------
SICSLLHVNKIFEVGMSENL+ENMKY NLDIVEK
Subjt: ----------------------------------------------------------SICSLLHVNKIFEVGMSENLRENMKYLNLDIVEK--------
Query: --------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFPQLCKDKIAPCIVYIHQIEWGA-IFLS---PH--
V+GVLDVSRSKEKSYETIVKEGFC EEVSSMELAQFPQLCKD IAPCIVYIHQI A IF+S P+
Subjt: --------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFPQLCKDKIAPCIVYIHQIEWGA-IFLS---PH--
Query: -----------------------------------------------------------------------VIAYLVNSLHIFGMCSFIGSNCHHSSVKT
V LV SLH+ F S+
Subjt: -----------------------------------------------------------------------VIAYLVNSLHIFGMCSFIGSNCHHSSVKT
Query: MPFKSHYGSDAAEQANFQRLANPNDVVDELLRDDTL-EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT--------------
+ +++Y + + N V+ E+ D + + + C N + TG + + VALIVFLSHIGSFVPADAAT
Subjt: MPFKSHYGSDAAEQANFQRLANPNDVVDELLRDDTL-EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT--------------
Query: --------------------------------------------------------------VLVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTE
VLVCTHLTELINESLL M ERIKFYNMSVIR DNDCTE
Subjt: --------------------------------------------------------------VLVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTE
Query: NEDIVFLYRLVPGHALPSYG
NEDIVFLYRLVPGHALPSYG
Subjt: NEDIVFLYRLVPGHALPSYG
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| XP_038903565.1 DNA mismatch repair protein MSH5 isoform X2 [Benincasa hispida] | 2.5e-65 | 32.87 | Show/hide |
Query: RVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVTGMDDGLNVK
RVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL GMS + V++ LVYLRVTGMDDGLN+K
Subjt: RVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVTGMDDGLNVK
Query: ERICY-----------------------------------------------------------------------------------------------
ERIC+
Subjt: ERICY-----------------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------------------SICSLLHVNKIFEVGMSENLRE
SICSLLHVNKIFEVGMSENLRE
Subjt: ------------------------------------------------------------------------------SICSLLHVNKIFEVGMSENLRE
Query: NMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFPQLCKDKIAPCIVYIHQIEW-
NMKYLNLDIVEK V+GVLDVSRSKEKSYETIVKEGFC EEVSSMELAQFPQLC DKIAPCIVYIHQI +
Subjt: NMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFPQLCKDKIAPCIVYIHQIEW-
Query: -----------------------------------------------GAIF----------LSPHVIAYLVNSLHIFGMCSFIGSNCHHSSVKTMPFKSH
G I+ + V LV S H+ F S+ + +++
Subjt: -----------------------------------------------GAIF----------LSPHVIAYLVNSLHIFGMCSFIGSNCHHSSVKTMPFKSH
Query: YGSDAAEQANFQRLANPNDVVDELLRDDTL--EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT-------------------
Y + + N V+ E+ D + + I G ++ + TG + + VALIVFLSHIGSFVPADAAT
Subjt: YGSDAAEQANFQRLANPNDVVDELLRDDTL--EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT-------------------
Query: ---------------------------------------------------------VLVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTENEDIV
VLVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTENEDIV
Subjt: ---------------------------------------------------------VLVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTENEDIV
Query: FLYRLVPGHALPSYG
FLYRL+PGHALPSYG
Subjt: FLYRLVPGHALPSYG
|
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| XP_038903566.1 DNA mismatch repair protein MSH5 isoform X3 [Benincasa hispida] | 3.2e-65 | 32.82 | Show/hide |
Query: RVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVTGMDDGLNVK
RVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL GMS + V++ LVYLRVTGMDDGLN+K
Subjt: RVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVTGMDDGLNVK
Query: ERICY-----------------------------------------------------------------------------------------------
ERIC+
Subjt: ERICY-----------------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------------------SICSLLHVNKIFEVGMSENLRE
SICSLLHVNKIFEVGMSENLRE
Subjt: ------------------------------------------------------------------------------SICSLLHVNKIFEVGMSENLRE
Query: NMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFPQLCKDKIAPCIVYIHQIEW-
NMKYLNLDIVEK V+GVLDVSRSKEKSYETIVKEGFC EEVSSMELAQFPQLC DKIAPCIVYIHQI +
Subjt: NMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFPQLCKDKIAPCIVYIHQIEW-
Query: -----------------------------------------------GAIF-----------LSPHVIAYLVNSLHIFGMCSFIGSNCHHSSVKTMPFKS
G I+ + V LV S H+ F S+ + ++
Subjt: -----------------------------------------------GAIF-----------LSPHVIAYLVNSLHIFGMCSFIGSNCHHSSVKTMPFKS
Query: HYGSDAAEQANFQRLANPNDVVDELLRDDTL--EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT------------------
+Y + + N V+ E+ D + + I G ++ + TG + + VALIVFLSHIGSFVPADAAT
Subjt: HYGSDAAEQANFQRLANPNDVVDELLRDDTL--EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT------------------
Query: ----------------------------------------------------------VLVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTENEDI
VLVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTENEDI
Subjt: ----------------------------------------------------------VLVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTENEDI
Query: VFLYRLVPGHALPSYG
VFLYRL+PGHALPSYG
Subjt: VFLYRLVPGHALPSYG
|
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| XP_038903567.1 DNA mismatch repair protein MSH5 isoform X4 [Benincasa hispida] | 4.7e-72 | 35.77 | Show/hide |
Query: RVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVTGMDDGLNVK
RVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL GMS + V++ LVYLRVTGMDDGLN+K
Subjt: RVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVTGMDDGLNVK
Query: ERICY-----------------------------------------------------------------------------------------------
ERIC+
Subjt: ERICY-----------------------------------------------------------------------------------------------
Query: -------------------SICSLLHVNKIFEVGMSENLRENMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFC--------
SICSLLHVNKIFEVGMSENLRENMKYLNLDIVEK V+GVLDVSRSKEKSYETIVKEGFC
Subjt: -------------------SICSLLHVNKIFEVGMSENLRENMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFC--------
Query: ---------EEVSSMELAQFPQLCKDKIAPCIVYIHQIEW------------------------------------------------GAIF--------
EEVSSMELAQFPQLC DKIAPCIVYIHQI + G I+
Subjt: ---------EEVSSMELAQFPQLCKDKIAPCIVYIHQIEW------------------------------------------------GAIF--------
Query: ---LSPHVIAYLVNSLHIFGMCSFIGSNCHHSSVKTMPFKSHYGSDAAEQANFQRLANPNDVVDELLRDDTL--EEVILNCGELSNGLKTGRPGIEIAEL
+ V LV S H+ F S+ + +++Y + + N V+ E+ D + + I G ++ + TG +
Subjt: ---LSPHVIAYLVNSLHIFGMCSFIGSNCHHSSVKTMPFKSHYGSDAAEQANFQRLANPNDVVDELLRDDTL--EEVILNCGELSNGLKTGRPGIEIAEL
Query: CRGVALIVFLSHIGSFVPADAAT----------------------------------------------------------------------------V
+ VALIVFLSHIGSFVPADAAT V
Subjt: CRGVALIVFLSHIGSFVPADAAT----------------------------------------------------------------------------V
Query: LVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTENEDIVFLYRLVPGHALPSYG
LVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTENEDIVFLYRL+PGHALPSYG
Subjt: LVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTENEDIVFLYRLVPGHALPSYG
|
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0L665 DNA_MISMATCH_REPAIR_2 domain-containing protein | 2.4e-66 | 32.56 | Show/hide |
Query: MHGLVSFLLRVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVT
MHGL SFLLRVGVSYYDSSIRQLHVLEVWEDGS+EYPLIDL GMS + V++ LVYLRVT
Subjt: MHGLVSFLLRVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVT
Query: GMDDGLNVKERICY--------------------------------------------------------------------------------------
GMDDGLN+KERICY
Subjt: GMDDGLNVKERICY--------------------------------------------------------------------------------------
Query: ---------------------------------------------------------------------------------------SICSLLHVNKIFE
SICSLLHVNKIFE
Subjt: ---------------------------------------------------------------------------------------SICSLLHVNKIFE
Query: VGMSENLRENMKYLNLDIVEK----------------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFPQLCK
VGMSENL+ENMKY NLDIVEK V+GVLDVSRSKEKSYETIVKEGFC EEVSSMELAQFPQLCK
Subjt: VGMSENLRENMKYLNLDIVEK----------------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFPQLCK
Query: DKIAPCIVYIHQIEW------------------------------------------------GAIF----------LSPHVIAYLVNSLHIFGMCSFIG
IAPCIVYIHQI + G I+ + V LV SLH+ F
Subjt: DKIAPCIVYIHQIEW------------------------------------------------GAIF----------LSPHVIAYLVNSLHIFGMCSFIG
Query: SNCHHSSVKTMPFKSHYGSDAAEQANFQRLANPNDVVDELLRDDTL--EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT---
S+ + +++Y + + N V+ E+ D + + I G ++ + TG + + VALIVFLSHIGSFVPA+AAT
Subjt: SNCHHSSVKTMPFKSHYGSDAAEQANFQRLANPNDVVDELLRDDTL--EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT---
Query: -------------------------------------------------------------------------VLVCTHLTELINESLLPMCERIKFYNM
VLVCTHLTELINES LPMCERIKFYNM
Subjt: -------------------------------------------------------------------------VLVCTHLTELINESLLPMCERIKFYNM
Query: SVIRADNDCTENEDIVFLYRLVPGHALPSYG
+VIR DNDCTENEDIVFLYRLVPGHALPSYG
Subjt: SVIRADNDCTENEDIVFLYRLVPGHALPSYG
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| A0A1S3BM83 DNA mismatch repair protein MSH5 | 3.3e-63 | 32.49 | Show/hide |
Query: RVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVTGMDDGLNVK
+VGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL GMS + V++ LVYLRVTGMDDGLN+K
Subjt: RVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVTGMDDGLNVK
Query: ERICY-----------------------------------------------------------------------------------------------
ERICY
Subjt: ERICY-----------------------------------------------------------------------------------------------
Query: ------------------------------------------------------------------------------SICSLLHVNKIFEVGMSENLRE
SICSLLHVNKIFEVGMSENL+E
Subjt: ------------------------------------------------------------------------------SICSLLHVNKIFEVGMSENLRE
Query: NMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFPQLCKDKIAPCIVYIHQIEW-
NMKY NLDIVEK V+GVLDVSRSKEKSYETIVKEGFC EEVSSMELAQFPQLCKD IAPCIVYIHQI +
Subjt: NMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFPQLCKDKIAPCIVYIHQIEW-
Query: -----------------------------------------------GAIF----------LSPHVIAYLVNSLHIFGMCSFIGSNCHHSSVKTMPFKSH
G I+ + V LV SLH+ F S+ + +++
Subjt: -----------------------------------------------GAIF----------LSPHVIAYLVNSLHIFGMCSFIGSNCHHSSVKTMPFKSH
Query: YGSDAAEQANFQRLANPNDVVDELLRDDTL-EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT--------------------
Y + + N V+ E+ D + + + C N + TG + + VALIVFLSHIGSFVPADAAT
Subjt: YGSDAAEQANFQRLANPNDVVDELLRDDTL-EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT--------------------
Query: --------------------------------------------------------VLVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTENEDIVF
VLVCTHLTELINESLL M ERIKFYNMSVIR DNDCTENEDIVF
Subjt: --------------------------------------------------------VLVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTENEDIVF
Query: LYRLVPGHALPSYG
LYRLVPGHALPSYG
Subjt: LYRLVPGHALPSYG
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| A0A5A7VBY4 DNA mismatch repair protein MSH5 | 5.4e-66 | 32.7 | Show/hide |
Query: MHGLVSFLLRVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVT
M GL SFLLRVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL GMS + V++ LVYLRVT
Subjt: MHGLVSFLLRVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVT
Query: GMDDGLNVKERICY--------------------------------------------------------------------------------------
GMDDGLN+KERICY
Subjt: GMDDGLNVKERICY--------------------------------------------------------------------------------------
Query: --------------------------------------------------------------------------------------------------SI
SI
Subjt: --------------------------------------------------------------------------------------------------SI
Query: CSLLHVNKIFEVGMSENLRENMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFP
CSLLHVNKIFEVGMSENL+ENMKY NLDIVEK V+GVLDVSRSKEKSYETIVKEGFC EEVSSMELAQFP
Subjt: CSLLHVNKIFEVGMSENLRENMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFP
Query: QLCKDKIAPCIVYIHQIEW------------------------------------------------GAIF----------LSPHVIAYLVNSLHIFGMC
QLCKD IAPCIVYIHQI + G I+ + V LV SLH+
Subjt: QLCKDKIAPCIVYIHQIEW------------------------------------------------GAIF----------LSPHVIAYLVNSLHIFGMC
Query: SFIGSNCHHSSVKTMPFKSHYGSDAAEQANFQRLANPNDVVDELLRDDTL-EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT
F S+ + +++Y + + N V+ E+ D + + + C N + TG + + VALIVFLSHIGSFVPADAAT
Subjt: SFIGSNCHHSSVKTMPFKSHYGSDAAEQANFQRLANPNDVVDELLRDDTL-EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT
Query: ----------------------------------------------------------------------------VLVCTHLTELINESLLPMCERIKF
VLVCTHLTELINESLL M ERIKF
Subjt: ----------------------------------------------------------------------------VLVCTHLTELINESLLPMCERIKF
Query: YNMSVIRADNDCTENEDIVFLYRLVPGHALPSYG
YNMSVIR DNDCTENEDIVFLYRLVPGHALPSYG
Subjt: YNMSVIRADNDCTENEDIVFLYRLVPGHALPSYG
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| A0A5D3BD47 DNA mismatch repair protein MSH5 | 2.0e-68 | 33.75 | Show/hide |
Query: MHGLVSFLLRVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVT
M GL SFLLRVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL GMS + V++ LVYLRVT
Subjt: MHGLVSFLLRVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVT
Query: GMDDGLNVKERICY--------------------------------------------------------------------------------------
GMDDGLN+KERICY
Subjt: GMDDGLNVKERICY--------------------------------------------------------------------------------------
Query: ----------------------------------------------------------SICSLLHVNKIFEVGMSENLRENMKYLNLDIVEK--------
SICSLLHVNKIFEVGMSENL+ENMKY NLDIVEK
Subjt: ----------------------------------------------------------SICSLLHVNKIFEVGMSENLRENMKYLNLDIVEK--------
Query: --------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFPQLCKDKIAPCIVYIHQIEWGA-IFLS---PH--
V+GVLDVSRSKEKSYETIVKEGFC EEVSSMELAQFPQLCKD IAPCIVYIHQI A IF+S P+
Subjt: --------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFPQLCKDKIAPCIVYIHQIEWGA-IFLS---PH--
Query: -----------------------------------------------------------------------VIAYLVNSLHIFGMCSFIGSNCHHSSVKT
V LV SLH+ F S+
Subjt: -----------------------------------------------------------------------VIAYLVNSLHIFGMCSFIGSNCHHSSVKT
Query: MPFKSHYGSDAAEQANFQRLANPNDVVDELLRDDTL-EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT--------------
+ +++Y + + N V+ E+ D + + + C N + TG + + VALIVFLSHIGSFVPADAAT
Subjt: MPFKSHYGSDAAEQANFQRLANPNDVVDELLRDDTL-EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT--------------
Query: --------------------------------------------------------------VLVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTE
VLVCTHLTELINESLL M ERIKFYNMSVIR DNDCTE
Subjt: --------------------------------------------------------------VLVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTE
Query: NEDIVFLYRLVPGHALPSYG
NEDIVFLYRLVPGHALPSYG
Subjt: NEDIVFLYRLVPGHALPSYG
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| A0A6J1F178 DNA mismatch repair protein MSH5 isoform X4 | 1.1e-63 | 32.22 | Show/hide |
Query: SFLLRVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVTGMDDG
SFLLRVGVSYYDSSIRQLHVL+VWEDGSMEYPLIDL G+S + V++ L+YLRVTGMDDG
Subjt: SFLLRVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVTGMDDG
Query: LNVKERICY-------------------------------------------------------------------------------------------
LN+KERI Y
Subjt: LNVKERICY-------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------SICSLLHVNKIFEVGMSE
S+CSLLHVNKIFEVGMSE
Subjt: ----------------------------------------------------------------------------------SICSLLHVNKIFEVGMSE
Query: NLRENMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFPQLCKDKIAPCIVYIHQ
NLR+NMKYLNLDIVEK V+GVLDVSRSKEKSYETIVKEGFC EEV+SME+AQFPQLCK+K+ PCIVYIHQ
Subjt: NLRENMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQFPQLCKDKIAPCIVYIHQ
Query: I-----------EWGAI---------------------FLSPH---------------------------VIAYLVNSLHIFGMCSFIGSNCHHSSVKTM
I E G + + SP V LV SLH+ F S+ +
Subjt: I-----------EWGAI---------------------FLSPH---------------------------VIAYLVNSLHIFGMCSFIGSNCHHSSVKTM
Query: PFKSHYGSDAAEQANFQRLANPNDVVDELLRDDTL--EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT--------------
+++Y + + N V+ E+ D + + I G + + TG + + VALIVFLSHIGSFVPADAAT
Subjt: PFKSHYGSDAAEQANFQRLANPNDVVDELLRDDTL--EEVILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAAT--------------
Query: --------------------------------------------------------------VLVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTE
VLVCTHLTELINESLLPMC+RIKFYNMSVIR DNDCTE
Subjt: --------------------------------------------------------------VLVCTHLTELINESLLPMCERIKFYNMSVIRADNDCTE
Query: NEDIVFLYRLVPGHALPSYG
NEDIVFLYRLVPGHALPSYG
Subjt: NEDIVFLYRLVPGHALPSYG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4JEP5 DNA mismatch repair protein MSH5 | 2.1e-38 | 32.18 | Show/hide |
Query: SICSLLHVNKIFEVGMSENLRENMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQ
SI +LLHVNKIFEVG+SE+LRE+M+ NLDI+EK V+GV+DV+RSKE+ Y+T+VKEGFC +EVS+MEL
Subjt: SICSLLHVNKIFEVGMSENLRENMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFC-----------------EEVSSMELAQ
Query: FPQLCKDKIAPCIVYIHQIEWGAIFLSPHVIAYLVNSLHIFGMC----------------------SFIGSNCH------HSSVK-----TMPFKSHY--
FP L K+K+ PCIVYI QI + + +N L F + +G H + ++ T+ F +H
Subjt: FPQLCKDKIAPCIVYIHQIEWGAIFLSPHVIAYLVNSLHIFGMC----------------------SFIGSNCH------HSSVK-----TMPFKSHY--
Query: -------------GSDAAEQANFQR-LANPNDVVD-----ELLRDDTLEEVILNCGELS-NG---LKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAA
+ A Q N+ R + ++D +L++ ++ I N E++ NG + TG + + VALIVFLSHIGSFVPADAA
Subjt: -------------GSDAAEQANFQR-LANPNDVVD-----ELLRDDTLEEVILNCGELS-NG---LKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAA
Query: T----------------------------------------------------------------------------VLVCTHLTELINESLLPMCERIK
T V+VCTHLTEL+NES LP+ E+IK
Subjt: T----------------------------------------------------------------------------VLVCTHLTELINESLLPMCERIK
Query: FYNMSVIRADNDCTENEDIVFLYRLVPGHALPSYG
FY MSV+R D + E+IVFLYRL+PG L SYG
Subjt: FYNMSVIRADNDCTENEDIVFLYRLVPGHALPSYG
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| F4JEP5 DNA mismatch repair protein MSH5 | 1.1e-12 | 37.6 | Show/hide |
Query: RVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVTGMDDGLNVK
RVGVSYYD S+RQLHVLE WE+ ++ LI++ G + V++ LVYLRVTGMDDGLN+K
Subjt: RVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL----------------------------GMSSSCFVRI--------------LVYLRVTGMDDGLNVK
Query: ERICYSICSLLHVNKIFEVGMSENL
ERICY + S++ V +V +S L
Subjt: ERICYSICSLLHVNKIFEVGMSENL
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| Q6L4V0 DNA mismatch repair protein MSH5 | 4.3e-28 | 28.05 | Show/hide |
Query: ICSLLHVNKIFEVGMSENLRENMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFCEE-----------------VSSMELAQF
ICSLLH+NKIFEVG+SE+L ++++N+D+V K V+GV+DV R KEK Y+T+VK+G CEE VS+ E+A F
Subjt: ICSLLHVNKIFEVGMSENLRENMKYLNLDIVEK---------------VMGVLDVSRSKEKSYETIVKEGFCEE-----------------VSSMELAQF
Query: PQLCKDKIAPCIVYIHQIEWGAIFLSPHVIAYLVNSLHIFGMC-SFIGS--NCHHSSVKTMPFKSHYGS-------------------------DAAEQA
P + + AP IVY+HQI + F + L+ L F S G ++ + KT + G +
Subjt: PQLCKDKIAPCIVYIHQIEWGAIFLSPHVIAYLVNSLHIFGMC-SFIGS--NCHHSSVKTMPFKSHYGS-------------------------DAAEQA
Query: NFQR----------LANPNDVVDELLRDDTLEEV---------------------ILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAA
NF +A N+ V +L +D++ E+ I + G ++ + TG + + VAL+VFL+HIGSFVPAD+A
Subjt: NFQR----------LANPNDVVDELLRDDTLEEV---------------------ILNCGELSNGLKTGRPGIEIAELCRGVALIVFLSHIGSFVPADAA
Query: ----------------------------------------------------------------------------TVLVCTHLTELINESLLPMCERIK
VL+ THLT++ ES LP E IK
Subjt: ----------------------------------------------------------------------------TVLVCTHLTELINESLLPMCERIK
Query: FYNMSVIRADNDCTENEDIVFLYRLVPGHALPSYG
Y MSV+ D T+NED++FLYRLVPG AL S+G
Subjt: FYNMSVIRADNDCTENEDIVFLYRLVPGHALPSYG
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| Q6L4V0 DNA mismatch repair protein MSH5 | 3.0e-05 | 65.62 | Show/hide |
Query: RVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL
RVG++YYDSS+ QL VLE+WED + ++PLIDL
Subjt: RVGVSYYDSSIRQLHVLEVWEDGSMEYPLIDL
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