; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10011492 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10011492
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING/FYVE/PHD zinc finger superfamily protein, putative isoform 1
Genome locationChr01:6553775..6556955
RNA-Seq ExpressionHG10011492
SyntenyHG10011492
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0003682 - chromatin binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001025 - Bromo adjacent homology (BAH) domain
IPR043151 - Bromo adjacent homology (BAH) domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055840.1 uncharacterized protein E6C27_scaffold104G00160 [Cucumis melo var. makuwa]6.8e-5784.25Show/hide
Query:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC
        GKL+   + SFSHE ESGL WAIL KCYFYEDLPKEVAHLR CSPE+ EVYTSDGYICLD+GLIRGPCEVL VAKY EELERRKQLG G DNGIKPIFLC
Subjt:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC

Query:  KWFYTEANKEFVPFTGTISENFSVTQC
        KWFYTEA+KEFVPFTG I ENFSVTQC
Subjt:  KWFYTEANKEFVPFTGTISENFSVTQC

TYK24064.1 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 [Cucumis melo var. makuwa]6.8e-5784.25Show/hide
Query:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC
        GKL+   + SFSHE ESGL WAIL KCYFYEDLPKEVAHLR CSPE+ EVYTSDGYICLD+GLIRGPCEVL VAKY EELERRKQLG G DNGIKPIFLC
Subjt:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC

Query:  KWFYTEANKEFVPFTGTISENFSVTQC
        KWFYTEA+KEFVPFTG I ENFSVTQC
Subjt:  KWFYTEANKEFVPFTGTISENFSVTQC

XP_004149357.3 uncharacterized protein LOC101222588 [Cucumis sativus]6.4e-5578.95Show/hide
Query:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC
        GKL+   + SFSHE ESGL WAIL KCYFYEDLPKEVAHL  CSPE+ EVYTSDGYICLD+GLIRGPCEVL VAKY EELERRKQL  G DNGIKPIFLC
Subjt:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC

Query:  KWFYTEANKEFVPFTGTISENFSVTQCEKIPIE
        KWFYTEA+KEFVPFTG I ENFSVTQ + +  E
Subjt:  KWFYTEANKEFVPFTGTISENFSVTQCEKIPIE

XP_008449200.2 PREDICTED: uncharacterized protein LOC103491150 isoform X1 [Cucumis melo]3.7e-5580.77Show/hide
Query:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC
        GKL+   + SFSHE ESGL WAIL KCYFYEDLPKEVAHL  CSPE+ EVYTSDGYICLD+GLIRGPCEVL VAKY EELERRKQLG G DNGIKPIFLC
Subjt:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC

Query:  KWFYTEANKEFVPFTGTISENFSVTQCEKI
        KWFYTEA+KEFVPFTG I ENFSVTQ + +
Subjt:  KWFYTEANKEFVPFTGTISENFSVTQCEKI

XP_038904765.1 uncharacterized protein LOC120091039 [Benincasa hispida]1.1e-5989.68Show/hide
Query:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC
        GKL+   +QSFSHE ESGLNWAIL KCYFYEDLPKEVAHL   SPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKY EELERRKQLGLGADNGIKPIFLC
Subjt:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC

Query:  KWFYTEANKEFVPFTGTISENFSVTQ
        KWFYTEANKEFVPFTG I ENFSVTQ
Subjt:  KWFYTEANKEFVPFTGTISENFSVTQ

TrEMBL top hitse value%identityAlignment
A0A0A0L2X4 Uncharacterized protein3.1e-5578.95Show/hide
Query:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC
        GKL+   + SFSHE ESGL WAIL KCYFYEDLPKEVAHL  CSPE+ EVYTSDGYICLD+GLIRGPCEVL VAKY EELERRKQL  G DNGIKPIFLC
Subjt:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC

Query:  KWFYTEANKEFVPFTGTISENFSVTQCEKIPIE
        KWFYTEA+KEFVPFTG I ENFSVTQ + +  E
Subjt:  KWFYTEANKEFVPFTGTISENFSVTQCEKIPIE

A0A1S3BLH8 uncharacterized protein LOC103491150 isoform X11.8e-5580.77Show/hide
Query:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC
        GKL+   + SFSHE ESGL WAIL KCYFYEDLPKEVAHL  CSPE+ EVYTSDGYICLD+GLIRGPCEVL VAKY EELERRKQLG G DNGIKPIFLC
Subjt:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC

Query:  KWFYTEANKEFVPFTGTISENFSVTQCEKI
        KWFYTEA+KEFVPFTG I ENFSVTQ + +
Subjt:  KWFYTEANKEFVPFTGTISENFSVTQCEKI

A0A1S4DY59 uncharacterized protein LOC103491150 isoform X23.1e-5583.33Show/hide
Query:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC
        GKL+   + SFSHE ESGL WAIL KCYFYEDLPKEVAHL  CSPE+ EVYTSDGYICLD+GLIRGPCEVL VAKY EELERRKQLG G DNGIKPIFLC
Subjt:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC

Query:  KWFYTEANKEFVPFTGTISENFSVTQ
        KWFYTEA+KEFVPFTG I ENFSVTQ
Subjt:  KWFYTEANKEFVPFTGTISENFSVTQ

A0A5A7UL23 Uncharacterized protein3.3e-5784.25Show/hide
Query:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC
        GKL+   + SFSHE ESGL WAIL KCYFYEDLPKEVAHLR CSPE+ EVYTSDGYICLD+GLIRGPCEVL VAKY EELERRKQLG G DNGIKPIFLC
Subjt:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC

Query:  KWFYTEANKEFVPFTGTISENFSVTQC
        KWFYTEA+KEFVPFTG I ENFSVTQC
Subjt:  KWFYTEANKEFVPFTGTISENFSVTQC

A0A5D3DKF1 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 13.3e-5784.25Show/hide
Query:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC
        GKL+   + SFSHE ESGL WAIL KCYFYEDLPKEVAHLR CSPE+ EVYTSDGYICLD+GLIRGPCEVL VAKY EELERRKQLG G DNGIKPIFLC
Subjt:  GKLL-LLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLC

Query:  KWFYTEANKEFVPFTGTISENFSVTQC
        KWFYTEA+KEFVPFTG I ENFSVTQC
Subjt:  KWFYTEANKEFVPFTGTISENFSVTQC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGCTTTTACTCTTAATGCAGTCCTTCAGCCATGAATGTGAAAGTGGGTTGAACTGGGCTATTCTTAACAAGTGTTACTTTTACGAGGACTTGCCAAAGGAAGT
TGCCCATCTCCGCTCATGCTCCCCTGAACAAGATGAGGTATATACATCCGATGGCTATATTTGTTTAGATGTGGGCTTAATTCGAGGCCCATGTGAAGTTCTTCCTGTTG
CCAAGTATAACGAAGAACTTGAAAGACGAAAACAATTGGGTCTTGGGGCAGATAATGGAATAAAGCCAATTTTCCTGTGCAAATGGTTTTATACTGAAGCTAACAAGGAA
TTTGTACCTTTTACTGGCACCATCTCTGAAAACTTCTCAGTGACGCAGTGTGAGAAAATCCCAATTGAAGCTGGCATGTGGCTTCTTATTGTTTTCCTTTATGAGTTTGT
AGATTTTGTGGTTGATGGAGTTATGAATACTGGAATTATGAGTACAGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGCTTTTACTCTTAATGCAGTCCTTCAGCCATGAATGTGAAAGTGGGTTGAACTGGGCTATTCTTAACAAGTGTTACTTTTACGAGGACTTGCCAAAGGAAGT
TGCCCATCTCCGCTCATGCTCCCCTGAACAAGATGAGGTATATACATCCGATGGCTATATTTGTTTAGATGTGGGCTTAATTCGAGGCCCATGTGAAGTTCTTCCTGTTG
CCAAGTATAACGAAGAACTTGAAAGACGAAAACAATTGGGTCTTGGGGCAGATAATGGAATAAAGCCAATTTTCCTGTGCAAATGGTTTTATACTGAAGCTAACAAGGAA
TTTGTACCTTTTACTGGCACCATCTCTGAAAACTTCTCAGTGACGCAGTGTGAGAAAATCCCAATTGAAGCTGGCATGTGGCTTCTTATTGTTTTCCTTTATGAGTTTGT
AGATTTTGTGGTTGATGGAGTTATGAATACTGGAATTATGAGTACAGTGTAA
Protein sequenceShow/hide protein sequence
MGKLLLLMQSFSHECESGLNWAILNKCYFYEDLPKEVAHLRSCSPEQDEVYTSDGYICLDVGLIRGPCEVLPVAKYNEELERRKQLGLGADNGIKPIFLCKWFYTEANKE
FVPFTGTISENFSVTQCEKIPIEAGMWLLIVFLYEFVDFVVDGVMNTGIMSTV